RNA–Protein interactions for RNA: ENST00000409001.5

SSFA2-202, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 4,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-202ENST00000409001 GPKOWQ92917 476 aaPredicted RBP eCLIP17.55■□□□□ 0.41e-6■■□□□ 12.6
SSFA2-202ENST00000409001 GGA1Q9UJY5 639 aa17.55■□□□□ 0.4
SSFA2-202ENST00000409001 CCNL1Q9UK58 526 aaPredicted RBP17.55■□□□□ 0.4
SSFA2-202ENST00000409001 VIMP08670 466 aaKnown RBP17.54■□□□□ 0.4
SSFA2-202ENST00000409001 PNMA1Q8ND90 353 aa17.54■□□□□ 0.4
SSFA2-202ENST00000409001 GPHNQ9NQX3 736 aaPredicted RBP17.54■□□□□ 0.4
SSFA2-202ENST00000409001 ZDHHC9Q9Y397 364 aa17.54■□□□□ 0.4
SSFA2-202ENST00000409001 CDC25BP30305 580 aa17.54■□□□□ 0.4
SSFA2-202ENST00000409001 WHAMMP3Q1A5X7 153 aa17.54■□□□□ 0.4
SSFA2-202ENST00000409001 CSRNP2Q9H175 543 aa17.54■□□□□ 0.4
SSFA2-202ENST00000409001 CDK12Q9NYV4 1490 aaPredicted RBP17.54■□□□□ 0.4
SSFA2-202ENST00000409001 MED23Q9ULK4 1368 aa17.54■□□□□ 0.4
SSFA2-202ENST00000409001 SCG2P13521 617 aa17.54■□□□□ 0.4
SSFA2-202ENST00000409001 C6orf163Q5TEZ5 329 aa17.54■□□□□ 0.4
SSFA2-202ENST00000409001 B4GALNT4Q76KP1 1039 aa17.53■□□□□ 0.4
SSFA2-202ENST00000409001 AIFM3Q96NN9 605 aa17.53■□□□□ 0.4
SSFA2-202ENST00000409001 HINFPQ9BQA5 517 aa17.53■□□□□ 0.4
SSFA2-202ENST00000409001 LZTS2Q9BRK4 669 aa17.53■□□□□ 0.4
SSFA2-202ENST00000409001 CASP14P31944 242 aa17.53■□□□□ 0.4
SSFA2-202ENST00000409001 TECP42680 631 aa17.53■□□□□ 0.4
SSFA2-202ENST00000409001 SFMBT2Q5VUG0 894 aa17.53■□□□□ 0.4
SSFA2-202ENST00000409001 MAEAQ7L5Y9 396 aa17.53■□□□□ 0.4
SSFA2-202ENST00000409001 DPH6Q7L8W6 267 aa17.53■□□□□ 0.4
SSFA2-202ENST00000409001 PUS7LQ9H0K6 701 aaKnown RBP17.53■□□□□ 0.4
SSFA2-202ENST00000409001 DDX41Q9UJV9 622 aaKnown RBP17.53■□□□□ 0.4
SSFA2-202ENST00000409001 DNM2P50570 870 aa17.53■□□□□ 0.4
SSFA2-202ENST00000409001 RPS6KA1Q15418 735 aa17.53■□□□□ 0.4
SSFA2-202ENST00000409001 NAP1L3Q99457 506 aaPredicted RBP17.53■□□□□ 0.4
SSFA2-202ENST00000409001 ARPP21Q9UBL0 812 aaPredicted RBP17.53■□□□□ 0.4
SSFA2-202ENST00000409001 PAK2Q13177 524 aa17.53■□□□□ 0.4
SSFA2-202ENST00000409001 DAAM2Q86T65 1068 aa17.53■□□□□ 0.4
SSFA2-202ENST00000409001 SMYD4Q8IYR2 804 aaPredicted RBP17.53■□□□□ 0.4
SSFA2-202ENST00000409001 GRAMD1CQ8IYS0 662 aa17.53■□□□□ 0.4
SSFA2-202ENST00000409001 LRRC45Q96CN5 670 aa17.53■□□□□ 0.4
SSFA2-202ENST00000409001 KIF2CQ99661 725 aa17.53■□□□□ 0.4
SSFA2-202ENST00000409001 DNM3Q9UQ16 869 aa17.53■□□□□ 0.4
SSFA2-202ENST00000409001 H7C1D1 291 aa17.52■□□□□ 0.4
SSFA2-202ENST00000409001 PPP6R2O75170 966 aa17.52■□□□□ 0.4
SSFA2-202ENST00000409001 GOLGA8HP0CJ92 632 aa17.52■□□□□ 0.4
SSFA2-202ENST00000409001 INPP5BP32019 993 aa17.52■□□□□ 0.4
SSFA2-202ENST00000409001 PPFIA1Q13136 1202 aa17.52■□□□□ 0.4
SSFA2-202ENST00000409001 EPN1Q9Y6I3 576 aaPredicted RBP17.52■□□□□ 0.4
SSFA2-202ENST00000409001 MLH3Q9UHC1 1453 aa17.52■□□□□ 0.4
SSFA2-202ENST00000409001 FMNL3Q8IVF7 1028 aa17.52■□□□□ 0.4
SSFA2-202ENST00000409001 TMEM87AQ8NBN3 555 aa17.52■□□□□ 0.4
SSFA2-202ENST00000409001 EYA3Q99504 573 aa17.52■□□□□ 0.4
SSFA2-202ENST00000409001 BACH1O14867 736 aa17.52■□□□□ 0.4
SSFA2-202ENST00000409001 ACTN4O43707 911 aaKnown RBP17.52■□□□□ 0.4
SSFA2-202ENST00000409001 GTPBP6O43824 516 aaPredicted RBP17.52■□□□□ 0.4
SSFA2-202ENST00000409001 CIAO1O76071 339 aa17.52■□□□□ 0.4
SSFA2-202ENST00000409001 NR5A1Q13285 461 aa17.52■□□□□ 0.4
SSFA2-202ENST00000409001 RBM26Q5T8P6 1007 aaKnown RBP17.52■□□□□ 0.4
SSFA2-202ENST00000409001 HAUS4Q9H6D7 363 aa17.52■□□□□ 0.4
SSFA2-202ENST00000409001 IKBKBO14920 756 aa17.52■□□□□ 0.39
SSFA2-202ENST00000409001 KRT5P13647 590 aa17.52■□□□□ 0.39
SSFA2-202ENST00000409001 ARID5BQ14865 1188 aa17.52■□□□□ 0.39
SSFA2-202ENST00000409001 SERPINA10Q9UK55 444 aa17.52■□□□□ 0.39
SSFA2-202ENST00000409001 ASAP1Q9ULH1 1129 aa17.52■□□□□ 0.39
SSFA2-202ENST00000409001 UTP11Q9Y3A2 253 aaKnown RBP17.52■□□□□ 0.39
SSFA2-202ENST00000409001 CPSF1Q10570 1443 aaKnown RBP17.52■□□□□ 0.39
SSFA2-202ENST00000409001 BIRC3Q13489 604 aa17.51■□□□□ 0.39
SSFA2-202ENST00000409001 RBM17Q96I25 401 aaKnown RBP17.51■□□□□ 0.39
SSFA2-202ENST00000409001 RPGRIP1Q96KN7 1286 aa17.51■□□□□ 0.39
SSFA2-202ENST00000409001 CALUO43852 315 aaPredicted RBP17.51■□□□□ 0.39
SSFA2-202ENST00000409001 FLOT1O75955 427 aa17.51■□□□□ 0.39
SSFA2-202ENST00000409001 MXRA7P84157 204 aa17.51■□□□□ 0.39
SSFA2-202ENST00000409001 SF3A3Q12874 501 aaKnown RBP eCLIP17.51■□□□□ 0.397e-8■■□□□ 13.8
SSFA2-202ENST00000409001 USH1GQ495M9 461 aa17.51■□□□□ 0.39
SSFA2-202ENST00000409001 SLFNL1Q499Z3 407 aa17.51■□□□□ 0.39
SSFA2-202ENST00000409001 ANKRD13CQ8N6S4 541 aa17.51■□□□□ 0.39
SSFA2-202ENST00000409001 TRIM58Q8NG06 486 aa17.51■□□□□ 0.39
SSFA2-202ENST00000409001 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.51■□□□□ 0.39
SSFA2-202ENST00000409001 GJB4Q9NTQ9 266 aa17.51■□□□□ 0.39
SSFA2-202ENST00000409001 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.51■□□□□ 0.393e-7■■■□□ 18.8
SSFA2-202ENST00000409001 CTTNBP2NLQ9P2B4 639 aa17.51■□□□□ 0.39
SSFA2-202ENST00000409001 RPN1P04843 607 aaKnown RBP17.51■□□□□ 0.39
SSFA2-202ENST00000409001 CHRNDQ07001 517 aa17.51■□□□□ 0.39
SSFA2-202ENST00000409001 PEX26Q7Z412 305 aa17.51■□□□□ 0.39
SSFA2-202ENST00000409001 CDCA7Q9BWT1 371 aaPredicted RBP17.51■□□□□ 0.39
SSFA2-202ENST00000409001 MAP3K15Q6ZN16 1313 aa17.5■□□□□ 0.39
SSFA2-202ENST00000409001 UBAP1LF5GYI3 381 aa17.5■□□□□ 0.39
SSFA2-202ENST00000409001 ZYXQ15942 572 aaKnown RBP17.5■□□□□ 0.39
SSFA2-202ENST00000409001 CCDC169A6NNP5 214 aa17.5■□□□□ 0.39
SSFA2-202ENST00000409001 KLRF2D3W0D1 207 aa17.5■□□□□ 0.39
SSFA2-202ENST00000409001 GCNT3O95395 438 aa17.5■□□□□ 0.39
SSFA2-202ENST00000409001 ATP1A3P13637 1013 aa17.5■□□□□ 0.39
SSFA2-202ENST00000409001 TCP10Q12799 353 aa17.5■□□□□ 0.39
SSFA2-202ENST00000409001 FERMT1Q9BQL6 677 aa17.5■□□□□ 0.39
SSFA2-202ENST00000409001 GLT8D2Q9H1C3 349 aa17.5■□□□□ 0.39
SSFA2-202ENST00000409001 ARHGEF35A5YM69 484 aa17.5■□□□□ 0.39
SSFA2-202ENST00000409001 TOM1O60784 492 aa17.5■□□□□ 0.39
SSFA2-202ENST00000409001 SEC31AO94979 1220 aaKnown RBP17.5■□□□□ 0.39
SSFA2-202ENST00000409001 PCDHB13Q9Y5F0 798 aa17.5■□□□□ 0.39
SSFA2-202ENST00000409001 GSDMAQ96QA5 445 aa17.5■□□□□ 0.39
SSFA2-202ENST00000409001 SLC39A2Q9NP94 309 aa17.5■□□□□ 0.39
SSFA2-202ENST00000409001 EXOC3O60645 756 aa17.49■□□□□ 0.39
SSFA2-202ENST00000409001 STAMBPO95630 424 aa17.49■□□□□ 0.39
SSFA2-202ENST00000409001 COPB1P53618 953 aaKnown RBP17.49■□□□□ 0.39
SSFA2-202ENST00000409001 PTPROQ16827 1216 aa17.49■□□□□ 0.39
SSFA2-202ENST00000409001 EPHA10Q5JZY3 1008 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms