RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 FAM221BA6H8Z2 402 aa9.66□□□□□ -0.86
PTPN12-202ENST00000407343 PRR19A6NJB7 356 aa9.66□□□□□ -0.86
PTPN12-202ENST00000407343 CBFA2T2O43439 604 aa9.66□□□□□ -0.86
PTPN12-202ENST00000407343 LRRN2O75325 713 aa9.66□□□□□ -0.86
PTPN12-202ENST00000407343 IGHA1P01876 353 aa9.66□□□□□ -0.86
PTPN12-202ENST00000407343 ZNF865P0CJ78 1059 aaPredicted RBP9.66□□□□□ -0.86
PTPN12-202ENST00000407343 ITGB7P26010 798 aa9.66□□□□□ -0.86
PTPN12-202ENST00000407343 ASPNQ9BXN1 380 aa9.66□□□□□ -0.86
PTPN12-202ENST00000407343 PRDM5Q9NQX1 630 aaPredicted RBP9.66□□□□□ -0.86
PTPN12-202ENST00000407343 SNTG2Q9NY99 539 aa9.66□□□□□ -0.86
PTPN12-202ENST00000407343 R3HCC1Q9Y3T6 440 aaKnown RBP9.66□□□□□ -0.86
PTPN12-202ENST00000407343 WDR64B1ANS9 1081 aa9.65□□□□□ -0.86
PTPN12-202ENST00000407343 K7ELQ4 463 aaPredicted RBP9.65□□□□□ -0.86
PTPN12-202ENST00000407343 SLC7A5Q01650 507 aa9.65□□□□□ -0.86
PTPN12-202ENST00000407343 ZNF746Q6NUN9 644 aaPredicted RBP9.65□□□□□ -0.86
PTPN12-202ENST00000407343 KIAA1211LQ6NV74 962 aa9.65□□□□□ -0.86
PTPN12-202ENST00000407343 ZNF513Q8N8E2 541 aaPredicted RBP9.65□□□□□ -0.86
PTPN12-202ENST00000407343 CCDC113Q9H0I3 377 aa9.65□□□□□ -0.86
PTPN12-202ENST00000407343 TPX2Q9ULW0 747 aaKnown RBP9.65□□□□□ -0.86
PTPN12-202ENST00000407343 CDK11AQ9UQ88 783 aaPredicted RBP9.65□□□□□ -0.86
PTPN12-202ENST00000407343 GSC2O15499 205 aa9.64□□□□□ -0.87
PTPN12-202ENST00000407343 OXCT1P55809 520 aa9.64□□□□□ -0.87
PTPN12-202ENST00000407343 GNPTABQ3T906 1256 aa9.64□□□□□ -0.87
PTPN12-202ENST00000407343 CYP27C1Q4G0S4 372 aa9.64□□□□□ -0.87
PTPN12-202ENST00000407343 SFRP5Q5T4F7 317 aa9.64□□□□□ -0.87
PTPN12-202ENST00000407343 DCAF15Q66K64 600 aa9.64□□□□□ -0.87
PTPN12-202ENST00000407343 SMARCC1Q92922 1105 aaPredicted RBP9.64□□□□□ -0.87
PTPN12-202ENST00000407343 ZSWIM4Q9H7M6 989 aa9.64□□□□□ -0.87
PTPN12-202ENST00000407343 CAPN6Q9Y6Q1 641 aa9.64□□□□□ -0.87
PTPN12-202ENST00000407343 DDAH1O94760 285 aa9.63□□□□□ -0.87
PTPN12-202ENST00000407343 TP53P04637 393 aaPredicted RBP9.63□□□□□ -0.87
PTPN12-202ENST00000407343 FURINP09958 794 aa9.63□□□□□ -0.87
PTPN12-202ENST00000407343 CYP27A1Q02318 531 aa9.63□□□□□ -0.87
PTPN12-202ENST00000407343 SNW1Q13573 536 aaKnown RBP9.63□□□□□ -0.87
PTPN12-202ENST00000407343 BMS1Q14692 1282 aaKnown RBP9.63□□□□□ -0.87
PTPN12-202ENST00000407343 NCAPHQ15003 741 aa9.63□□□□□ -0.87
PTPN12-202ENST00000407343 NBPF9Q3BBW0 867 aa9.63□□□□□ -0.87
PTPN12-202ENST00000407343 BBS9Q3SYG4 887 aa9.63□□□□□ -0.87
PTPN12-202ENST00000407343 ANKRD39Q53RE8 183 aa9.63□□□□□ -0.87
PTPN12-202ENST00000407343 LRP10Q7Z4F1 713 aa9.63□□□□□ -0.87
PTPN12-202ENST00000407343 DTWD2Q8NBA8 298 aa9.63□□□□□ -0.87
PTPN12-202ENST00000407343 COX4I2Q96KJ9 171 aa9.63□□□□□ -0.87
PTPN12-202ENST00000407343 DEPDC7Q96QD5 511 aa9.63□□□□□ -0.87
PTPN12-202ENST00000407343 KLHL25Q9H0H3 589 aa9.63□□□□□ -0.87
PTPN12-202ENST00000407343 FAM86C1Q9NVL1 165 aa9.63□□□□□ -0.87
PTPN12-202ENST00000407343 LOC105371045A0A1W2PR82 267 aa9.62□□□□□ -0.87
PTPN12-202ENST00000407343 RNF4P78317 190 aa9.62□□□□□ -0.87
PTPN12-202ENST00000407343 RASGRF1Q13972 1273 aa9.62□□□□□ -0.87
PTPN12-202ENST00000407343 CPSF6Q16630 551 aaKnown RBP eCLIP9.62□□□□□ -0.87
PTPN12-202ENST00000407343 NKPD1Q17RQ9 610 aa9.62□□□□□ -0.87
PTPN12-202ENST00000407343 FAM181AQ8N9Y4 354 aa9.62□□□□□ -0.87
PTPN12-202ENST00000407343 HAUS7Q99871 368 aa9.62□□□□□ -0.87
PTPN12-202ENST00000407343 METTL22Q9BUU2 404 aaPredicted RBP9.62□□□□□ -0.87
PTPN12-202ENST00000407343 GTF2IRD1Q9UHL9 959 aa9.62□□□□□ -0.87
PTPN12-202ENST00000407343 PLAGL2Q9UPG8 496 aa9.62□□□□□ -0.87
PTPN12-202ENST00000407343 KIR3DL1P43629 444 aa9.61□□□□□ -0.87
PTPN12-202ENST00000407343 TNK2Q07912 1038 aa9.61□□□□□ -0.87
PTPN12-202ENST00000407343 AUHQ13825 339 aaKnown RBP9.61□□□□□ -0.87
PTPN12-202ENST00000407343 SLC51AQ86UW1 340 aa9.61□□□□□ -0.87
PTPN12-202ENST00000407343 C7orf61Q8IZ16 206 aa9.61□□□□□ -0.87
PTPN12-202ENST00000407343 ZNF451Q9Y4E5 1061 aa9.61□□□□□ -0.87
PTPN12-202ENST00000407343 U2SURPO15042 1029 aaKnown RBP9.6□□□□□ -0.87
PTPN12-202ENST00000407343 PDPK1O15530 556 aa9.6□□□□□ -0.87
PTPN12-202ENST00000407343 SUSD5O60279 629 aa9.6□□□□□ -0.87
PTPN12-202ENST00000407343 EPHX1P07099 455 aa9.6□□□□□ -0.87
PTPN12-202ENST00000407343 SRFP11831 508 aa9.6□□□□□ -0.87
PTPN12-202ENST00000407343 CYP7A1P22680 504 aa9.6□□□□□ -0.87
PTPN12-202ENST00000407343 PRSS36Q5K4E3 855 aa9.6□□□□□ -0.87
PTPN12-202ENST00000407343 DUSP27Q5VZP5 1158 aa9.6□□□□□ -0.87
PTPN12-202ENST00000407343 GIMAP6Q6P9H5 292 aa9.6□□□□□ -0.87
PTPN12-202ENST00000407343 SPACA3Q8IXA5 215 aa9.6□□□□□ -0.87
PTPN12-202ENST00000407343 OSBPL1AQ9BXW6 950 aa9.6□□□□□ -0.87
PTPN12-202ENST00000407343 MKRN2Q9H000 416 aaKnown RBP9.6□□□□□ -0.87
PTPN12-202ENST00000407343 MKNK2Q9HBH9 465 aa9.6□□□□□ -0.87
PTPN12-202ENST00000407343 ST14Q9Y5Y6 855 aa9.6□□□□□ -0.87
PTPN12-202ENST00000407343 CBX7O95931 251 aa9.59□□□□□ -0.87
PTPN12-202ENST00000407343 SLC10A6Q3KNW5 377 aa9.59□□□□□ -0.87
PTPN12-202ENST00000407343 CCDC144CPQ8IYA2 1237 aa9.59□□□□□ -0.87
PTPN12-202ENST00000407343 MFSD4AQ8N468 514 aa9.59□□□□□ -0.87
PTPN12-202ENST00000407343 SRPK1Q96SB4 655 aaKnown RBP9.59□□□□□ -0.87
PTPN12-202ENST00000407343 PRDM14Q9GZV8 571 aa9.59□□□□□ -0.87
PTPN12-202ENST00000407343 ATG3Q9NT62 314 aa9.59□□□□□ -0.87
PTPN12-202ENST00000407343 APEX2Q9UBZ4 518 aa9.59□□□□□ -0.87
PTPN12-202ENST00000407343 SHISA3A0PJX4 238 aa9.58□□□□□ -0.88
PTPN12-202ENST00000407343 CD247P20963 164 aa9.58□□□□□ -0.88
PTPN12-202ENST00000407343 HOXA10P31260 410 aaPredicted RBP9.58□□□□□ -0.88
PTPN12-202ENST00000407343 NFE2L2Q16236 605 aa9.58□□□□□ -0.88
PTPN12-202ENST00000407343 TMC3Q7Z5M5 1100 aa9.58□□□□□ -0.88
PTPN12-202ENST00000407343 ST13P5Q8NFI4 369 aaPredicted RBP9.58□□□□□ -0.88
PTPN12-202ENST00000407343 GP6Q9HCN6 339 aa9.58□□□□□ -0.88
PTPN12-202ENST00000407343 PIM2Q9P1W9 311 aa9.58□□□□□ -0.88
PTPN12-202ENST00000407343 CCDC85CA6NKD9 419 aa9.57□□□□□ -0.88
PTPN12-202ENST00000407343 TGFB1P01137 390 aa9.57□□□□□ -0.88
PTPN12-202ENST00000407343 CEACAM5P06731 702 aa9.57□□□□□ -0.88
PTPN12-202ENST00000407343 ZNF143P52747 638 aaPredicted RBP9.57□□□□□ -0.88
PTPN12-202ENST00000407343 SPATC1Q76KD6 591 aa9.57□□□□□ -0.88
PTPN12-202ENST00000407343 PIWIL2Q8TC59 973 aaKnown RBP9.57□□□□□ -0.88
PTPN12-202ENST00000407343 DUSP15Q9H1R2 295 aaPredicted RBP9.57□□□□□ -0.88
PTPN12-202ENST00000407343 ANKRD34BA5PLL1 514 aa9.56□□□□□ -0.88
PTPN12-202ENST00000407343 CAPNS1P04632 268 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms