RNA–Protein interactions for RNA: ENST00000402738.5

HERC3-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-202ENST00000402738 CSRNP2Q9H175 543 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 NOP53Q9NZM5 478 aaKnown RBP10.83□□□□□ -0.68
HERC3-202ENST00000402738 NPC1L1Q9UHC9 1359 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 A0A1W2PQ27 194 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 A0A1W2PQ64 194 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 A0A1W2PQD8 194 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 RAPGEF3O95398 923 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 ST5P78524 1137 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 TMED1Q13445 227 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 PROSER2Q86WR7 435 aaPredicted RBP10.83□□□□□ -0.68
HERC3-202ENST00000402738 VPS37BQ9H9H4 285 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 PARP2Q9UGN5 583 aa10.83□□□□□ -0.68
HERC3-202ENST00000402738 ATP1A3P13637 1013 aa10.82□□□□□ -0.68
HERC3-202ENST00000402738 AKNAD1Q5T1N1 836 aa10.82□□□□□ -0.68
HERC3-202ENST00000402738 SPDL1Q96EA4 605 aa10.82□□□□□ -0.68
HERC3-202ENST00000402738 LSG1Q9H089 658 aaKnown RBP10.82□□□□□ -0.68
HERC3-202ENST00000402738 AMFRQ9UKV5 643 aa10.82□□□□□ -0.68
HERC3-202ENST00000402738 ACEP12821 1306 aa10.82□□□□□ -0.68
HERC3-202ENST00000402738 FAM135BQ49AJ0 1406 aa10.82□□□□□ -0.68
HERC3-202ENST00000402738 GAS8O95995 478 aa10.82□□□□□ -0.68
HERC3-202ENST00000402738 DNM2P50570 870 aa10.82□□□□□ -0.68
HERC3-202ENST00000402738 EHHADHQ08426 723 aa10.82□□□□□ -0.68
HERC3-202ENST00000402738 IDI1Q13907 227 aa10.82□□□□□ -0.68
HERC3-202ENST00000402738 DYMQ7RTS9 669 aa10.82□□□□□ -0.68
HERC3-202ENST00000402738 EHMT1Q9H9B1 1298 aa10.82□□□□□ -0.68
HERC3-202ENST00000402738 MBD4O95243 580 aa10.82□□□□□ -0.68
HERC3-202ENST00000402738 RANBP1P43487 201 aa10.82□□□□□ -0.68
HERC3-202ENST00000402738 UNC5CLQ8IV45 518 aa10.82□□□□□ -0.68
HERC3-202ENST00000402738 TRIML1Q8N9V2 468 aa10.82□□□□□ -0.68
HERC3-202ENST00000402738 ARMC2Q8NEN0 867 aa10.82□□□□□ -0.68
HERC3-202ENST00000402738 TEX14Q8IWB6 1497 aa10.82□□□□□ -0.68
HERC3-202ENST00000402738 CXCR5P32302 372 aa10.82□□□□□ -0.68
HERC3-202ENST00000402738 COPB1P53618 953 aaKnown RBP10.82□□□□□ -0.68
HERC3-202ENST00000402738 SLC7A5Q01650 507 aa10.82□□□□□ -0.68
HERC3-202ENST00000402738 SMC1BQ8NDV3 1235 aa10.82□□□□□ -0.68
HERC3-202ENST00000402738 MAGEB6P1A0A0J9YX57 407 aa10.81□□□□□ -0.68
HERC3-202ENST00000402738 hCG_1642624A0A1W2PR95 340 aa10.81□□□□□ -0.68
HERC3-202ENST00000402738 EIF4E1BA6NMX2 242 aaKnown RBP10.81□□□□□ -0.68
HERC3-202ENST00000402738 PPFIA2O75334 1257 aa10.81□□□□□ -0.68
HERC3-202ENST00000402738 ECM2O94769 699 aaPredicted RBP10.81□□□□□ -0.68
HERC3-202ENST00000402738 BAG3O95817 575 aa10.81□□□□□ -0.68
HERC3-202ENST00000402738 MRPS25P82663 173 aaKnown RBP10.81□□□□□ -0.68
HERC3-202ENST00000402738 NAA35Q5VZE5 725 aa10.81□□□□□ -0.68
HERC3-202ENST00000402738 PPP1R21Q6ZMI0 780 aa10.81□□□□□ -0.68
HERC3-202ENST00000402738 PLB1Q6P1J6 1458 aa10.81□□□□□ -0.68
HERC3-202ENST00000402738 GNAT2P19087 354 aa10.81□□□□□ -0.68
HERC3-202ENST00000402738 GGCXP38435 758 aa10.81□□□□□ -0.68
HERC3-202ENST00000402738 GNPTABQ3T906 1256 aa10.81□□□□□ -0.68
HERC3-202ENST00000402738 KBTBD3Q8NAB2 608 aa10.81□□□□□ -0.68
HERC3-202ENST00000402738 TMEM87AQ8NBN3 555 aa10.81□□□□□ -0.68
HERC3-202ENST00000402738 RTEL1Q9NZ71 1219 aa10.81□□□□□ -0.68
HERC3-202ENST00000402738 UGGT2Q9NYU1 1516 aa10.81□□□□□ -0.68
HERC3-202ENST00000402738 ARHGEF12Q9NZN5 1544 aa10.81□□□□□ -0.68
HERC3-202ENST00000402738 LARGE1O95461 756 aa10.81□□□□□ -0.68
HERC3-202ENST00000402738 GNA11P29992 359 aa10.81□□□□□ -0.68
HERC3-202ENST00000402738 FAM69CQ0P6D2 419 aa10.81□□□□□ -0.68
HERC3-202ENST00000402738 SCRN1Q12765 414 aa10.81□□□□□ -0.68
HERC3-202ENST00000402738 ALS2CLQ60I27 953 aa10.81□□□□□ -0.68
HERC3-202ENST00000402738 RRP36Q96EU6 259 aaKnown RBP10.81□□□□□ -0.68
HERC3-202ENST00000402738 FAM167BQ9BTA0 163 aa10.81□□□□□ -0.68
HERC3-202ENST00000402738 KCNF1Q9H3M0 494 aa10.81□□□□□ -0.68
HERC3-202ENST00000402738 TBC1D7Q9P0N9 293 aa10.81□□□□□ -0.68
HERC3-202ENST00000402738 FBXW10Q5XX13 1052 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 SARM1Q6SZW1 724 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 ARMC9Q7Z3E5 817 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 ANKLE2Q86XL3 938 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 PLA2G4DQ86XP0 818 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 SCYL3Q8IZE3 742 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 ZNF710Q8N1W2 664 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 EEF2KMTQ96G04 330 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 LSM14BQ9BX40 385 aaKnown RBP10.8□□□□□ -0.68
HERC3-202ENST00000402738 NOVA2Q9UNW9 492 aaKnown RBP10.8□□□□□ -0.68
HERC3-202ENST00000402738 GPAA1O43292 621 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 NELFCDQ8IXH7 590 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 U2AF1L4Q8WU68 220 aaKnown RBP10.8□□□□□ -0.68
HERC3-202ENST00000402738 ZNF274Q96GC6 653 aaPredicted RBP10.8□□□□□ -0.68
HERC3-202ENST00000402738 EPSTI1Q96J88 318 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 NUCKS1Q9H1E3 243 aaKnown RBP10.8□□□□□ -0.68
HERC3-202ENST00000402738 A0A1W2PP64 1363 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 SLFN14P0C7P3 912 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 TXKP42681 527 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 VPS41P49754 854 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 RASSF7Q02833 373 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 MYO1EQ12965 1108 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 OSCARQ8IYS5 282 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 HELBQ8NG08 1087 aaPredicted RBP10.8□□□□□ -0.68
HERC3-202ENST00000402738 FBXO41Q8TF61 875 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 URB2Q14146 1524 aaKnown RBP10.8□□□□□ -0.68
HERC3-202ENST00000402738 THOC2Q8NI27 1593 aaKnown RBP10.8□□□□□ -0.68
HERC3-202ENST00000402738 CHL1O00533 1208 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 CREB3O43889 395 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 KRT5P13647 590 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 ABCB4P21439 1286 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 IRX4P78413 519 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 TOGARAM2Q6ZUX3 1019 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 NOSTRINQ8IVI9 506 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 CNPY4Q8N129 248 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 IQCDQ96DY2 449 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 VPS54Q9P1Q0 977 aa10.8□□□□□ -0.68
HERC3-202ENST00000402738 PRDM4Q9UKN5 801 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms