RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 LRRC37AA6NMS7 1700 aa20.24■□□□□ 0.83
HLA-DQB1-204ENST00000399084 BIN1O00499 593 aa20.23■□□□□ 0.83
HLA-DQB1-204ENST00000399084 POLR2DO15514 142 aaKnown RBP20.23■□□□□ 0.83
HLA-DQB1-204ENST00000399084 SLFN14P0C7P3 912 aa20.23■□□□□ 0.83
HLA-DQB1-204ENST00000399084 ALDH1B1P30837 517 aa20.23■□□□□ 0.83
HLA-DQB1-204ENST00000399084 KCNJ6P48051 423 aa20.23■□□□□ 0.83
HLA-DQB1-204ENST00000399084 PNOCQ13519 176 aa20.23■□□□□ 0.83
HLA-DQB1-204ENST00000399084 TXNRD1Q16881 649 aa20.23■□□□□ 0.83
HLA-DQB1-204ENST00000399084 DAGLBQ8NCG7 672 aa20.23■□□□□ 0.83
HLA-DQB1-204ENST00000399084 NEDD1Q8NHV4 660 aa20.23■□□□□ 0.83
HLA-DQB1-204ENST00000399084 CACTINQ8WUQ7 758 aaKnown RBP20.23■□□□□ 0.83
HLA-DQB1-204ENST00000399084 NRBP1Q9UHY1 535 aa20.23■□□□□ 0.83
HLA-DQB1-204ENST00000399084 NMT2O60551 498 aa20.22■□□□□ 0.83
HLA-DQB1-204ENST00000399084 DDR1Q08345 913 aa20.22■□□□□ 0.83
HLA-DQB1-204ENST00000399084 SEMA3FQ13275 785 aa20.22■□□□□ 0.83
HLA-DQB1-204ENST00000399084 DIXDC1Q155Q3 683 aa20.22■□□□□ 0.83
HLA-DQB1-204ENST00000399084 MFSD14BQ5SR56 506 aa20.22■□□□□ 0.83
HLA-DQB1-204ENST00000399084 TEX11Q8IYF3 940 aa20.22■□□□□ 0.83
HLA-DQB1-204ENST00000399084 CCDC12Q8WUD4 166 aaPredicted RBP20.22■□□□□ 0.83
HLA-DQB1-204ENST00000399084 CSRNP2Q9H175 543 aa20.22■□□□□ 0.83
HLA-DQB1-204ENST00000399084 NAV1Q8NEY1 1877 aa20.22■□□□□ 0.83
HLA-DQB1-204ENST00000399084 RASA1P20936 1047 aa20.22■□□□□ 0.83
HLA-DQB1-204ENST00000399084 ERCC5P28715 1186 aaPredicted RBP20.22■□□□□ 0.83
HLA-DQB1-204ENST00000399084 NOVP48745 357 aa20.22■□□□□ 0.83
HLA-DQB1-204ENST00000399084 FOXP4Q8IVH2 680 aaPredicted RBP20.22■□□□□ 0.83
HLA-DQB1-204ENST00000399084 MYRIPQ8NFW9 859 aa20.22■□□□□ 0.83
HLA-DQB1-204ENST00000399084 SHISA4Q96DD7 197 aa20.22■□□□□ 0.83
HLA-DQB1-204ENST00000399084 POLLQ9UGP5 575 aa20.22■□□□□ 0.83
HLA-DQB1-204ENST00000399084 PCDHA4Q9UN74 947 aa20.22■□□□□ 0.83
HLA-DQB1-204ENST00000399084 PALM3A6NDB9 673 aaPredicted RBP20.21■□□□□ 0.83
HLA-DQB1-204ENST00000399084 ACTN4O43707 911 aaKnown RBP20.21■□□□□ 0.83
HLA-DQB1-204ENST00000399084 NPR1P16066 1061 aa20.21■□□□□ 0.83
HLA-DQB1-204ENST00000399084 MORC3Q14149 939 aa20.21■□□□□ 0.83
HLA-DQB1-204ENST00000399084 BLIDQ8IZY5 108 aa20.21■□□□□ 0.83
HLA-DQB1-204ENST00000399084 ENOX1Q8TC92 643 aaKnown RBP20.21■□□□□ 0.83
HLA-DQB1-204ENST00000399084 SPZ1Q9BXG8 430 aa20.21■□□□□ 0.83
HLA-DQB1-204ENST00000399084 TMX4Q9H1E5 349 aaPredicted RBP20.21■□□□□ 0.83
HLA-DQB1-204ENST00000399084 C6orf229H3BNL8 230 aa20.2■□□□□ 0.82
HLA-DQB1-204ENST00000399084 LAD1O00515 517 aa20.2■□□□□ 0.82
HLA-DQB1-204ENST00000399084 PPEF1O14829 653 aaPredicted RBP20.2■□□□□ 0.82
HLA-DQB1-204ENST00000399084 TRIM37O94972 964 aa20.2■□□□□ 0.82
HLA-DQB1-204ENST00000399084 TUBB4AP04350 444 aa20.2■□□□□ 0.82
HLA-DQB1-204ENST00000399084 GTF2F1P35269 517 aaKnown RBP eCLIP20.2■□□□□ 0.82
HLA-DQB1-204ENST00000399084 PDE6BP35913 854 aa20.2■□□□□ 0.82
HLA-DQB1-204ENST00000399084 CCDC144BQ3MJ40 725 aa20.2■□□□□ 0.82
HLA-DQB1-204ENST00000399084 GSDMAQ96QA5 445 aa20.2■□□□□ 0.82
HLA-DQB1-204ENST00000399084 SERTAD1Q9UHV2 236 aa20.2■□□□□ 0.82
HLA-DQB1-204ENST00000399084 JAG2Q9Y219 1238 aa20.2■□□□□ 0.82
HLA-DQB1-204ENST00000399084 CDK8P49336 464 aa20.19■□□□□ 0.82
HLA-DQB1-204ENST00000399084 RHBDL3P58872 404 aa20.19■□□□□ 0.82
HLA-DQB1-204ENST00000399084 FANCCQ00597 558 aa20.19■□□□□ 0.82
HLA-DQB1-204ENST00000399084 PPP4R3BQ5MIZ7 849 aa20.19■□□□□ 0.82
HLA-DQB1-204ENST00000399084 SH3RF1Q7Z6J0 888 aa20.19■□□□□ 0.82
HLA-DQB1-204ENST00000399084 XPO4Q9C0E2 1151 aaKnown RBP20.19■□□□□ 0.82
HLA-DQB1-204ENST00000399084 IFNKQ9P0W0 207 aa20.19■□□□□ 0.82
HLA-DQB1-204ENST00000399084 MAD2L2Q9UI95 211 aa20.19■□□□□ 0.82
HLA-DQB1-204ENST00000399084 MYO3BQ8WXR4 1341 aa20.19■□□□□ 0.82
HLA-DQB1-204ENST00000399084 LTBP1Q14766 1721 aa20.19■□□□□ 0.82
HLA-DQB1-204ENST00000399084 hCG_1984214I3L0E3 225 aa20.19■□□□□ 0.82
HLA-DQB1-204ENST00000399084 TOP1P11387 765 aaKnown RBP20.19■□□□□ 0.82
HLA-DQB1-204ENST00000399084 LONP1P36776 959 aaKnown RBP20.19■□□□□ 0.82
HLA-DQB1-204ENST00000399084 MTERF4Q7Z6M4 381 aaKnown RBP20.19■□□□□ 0.82
HLA-DQB1-204ENST00000399084 ZNF713Q8N859 430 aaPredicted RBP20.19■□□□□ 0.82
HLA-DQB1-204ENST00000399084 IQUBQ8NA54 791 aa20.19■□□□□ 0.82
HLA-DQB1-204ENST00000399084 DYNLL2Q96FJ2 89 aa20.19■□□□□ 0.82
HLA-DQB1-204ENST00000399084 EYA3Q99504 573 aa20.19■□□□□ 0.82
HLA-DQB1-204ENST00000399084 TMEM47Q9BQJ4 181 aa20.19■□□□□ 0.82
HLA-DQB1-204ENST00000399084 MAN1B1Q9UKM7 699 aa20.19■□□□□ 0.82
HLA-DQB1-204ENST00000399084 UQCRHLA0A096LP55 91 aa20.18■□□□□ 0.82
HLA-DQB1-204ENST00000399084 KIF2AO00139 706 aaPredicted RBP20.18■□□□□ 0.82
HLA-DQB1-204ENST00000399084 UQCRHP07919 91 aa20.18■□□□□ 0.82
HLA-DQB1-204ENST00000399084 SKILP12757 684 aa20.18■□□□□ 0.82
HLA-DQB1-204ENST00000399084 ATP2B1P20020 1258 aa20.18■□□□□ 0.82
HLA-DQB1-204ENST00000399084 PLCD1P51178 756 aa20.18■□□□□ 0.82
HLA-DQB1-204ENST00000399084 PTGDRQ13258 359 aa20.18■□□□□ 0.82
HLA-DQB1-204ENST00000399084 ORC2Q13416 577 aaPredicted RBP20.18■□□□□ 0.82
HLA-DQB1-204ENST00000399084 GRIK5Q16478 980 aa20.18■□□□□ 0.82
HLA-DQB1-204ENST00000399084 MAPKAPK5Q8IW41 473 aa20.18■□□□□ 0.82
HLA-DQB1-204ENST00000399084 ZC3H12CQ9C0D7 883 aaKnown RBP20.18■□□□□ 0.82
HLA-DQB1-204ENST00000399084 BARHL2Q9NY43 387 aa20.18■□□□□ 0.82
HLA-DQB1-204ENST00000399084 PAXBP1Q9Y5B6 917 aa20.18■□□□□ 0.82
HLA-DQB1-204ENST00000399084 FLT1P17948 1338 aa20.18■□□□□ 0.82
HLA-DQB1-204ENST00000399084 NRXN2Q9P2S2 1712 aa20.18■□□□□ 0.82
HLA-DQB1-204ENST00000399084 A0A087WWV3 80 aa20.17■□□□□ 0.82
HLA-DQB1-204ENST00000399084 SRGNP10124 158 aa20.17■□□□□ 0.82
HLA-DQB1-204ENST00000399084 GRIN1Q05586 938 aa20.17■□□□□ 0.82
HLA-DQB1-204ENST00000399084 LRMPQ12912 555 aa20.17■□□□□ 0.82
HLA-DQB1-204ENST00000399084 FBXW7Q969H0 707 aa20.17■□□□□ 0.82
HLA-DQB1-204ENST00000399084 MAP7D2Q96T17 732 aa20.17■□□□□ 0.82
HLA-DQB1-204ENST00000399084 MRIQ9BWK5 157 aa20.17■□□□□ 0.82
HLA-DQB1-204ENST00000399084 PLIN4Q96Q06 1357 aa20.17■□□□□ 0.82
HLA-DQB1-204ENST00000399084 DDX60LQ5H9U9 1706 aaKnown RBP20.16■□□□□ 0.82
HLA-DQB1-204ENST00000399084 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.16■□□□□ 0.82
HLA-DQB1-204ENST00000399084 TXLNAP40222 546 aa20.16■□□□□ 0.82
HLA-DQB1-204ENST00000399084 UBASH3AP57075 661 aa20.16■□□□□ 0.82
HLA-DQB1-204ENST00000399084 EVX2Q03828 476 aa20.16■□□□□ 0.82
HLA-DQB1-204ENST00000399084 EARS2Q5JPH6 523 aaKnown RBP20.16■□□□□ 0.82
HLA-DQB1-204ENST00000399084 FILIP1Q7Z7B0 1213 aa20.16■□□□□ 0.82
HLA-DQB1-204ENST00000399084 PROM2Q8N271 834 aa20.16■□□□□ 0.82
HLA-DQB1-204ENST00000399084 CCDC112Q8NEF3 446 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms