RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 TMEM179Q6ZVK1 233 aa13.43□□□□□ -0.26
SRMP1-201ENST00000398959 SIRT2Q8IXJ6 389 aa13.43□□□□□ -0.26
SRMP1-201ENST00000398959 AMOTL1Q8IY63 956 aa13.43□□□□□ -0.26
SRMP1-201ENST00000398959 BOLA2Q9H3K6 86 aa13.43□□□□□ -0.26
SRMP1-201ENST00000398959 LAMA3Q16787 3333 aa13.43□□□□□ -0.26
SRMP1-201ENST00000398959 GREB1LQ9C091 1923 aaPredicted RBP13.43□□□□□ -0.26
SRMP1-201ENST00000398959 PFASO15067 1338 aa13.42□□□□□ -0.26
SRMP1-201ENST00000398959 A0A1W2PRG0 241 aa13.42□□□□□ -0.26
SRMP1-201ENST00000398959 MBD4O95243 580 aa13.42□□□□□ -0.26
SRMP1-201ENST00000398959 CYP2D6P10635 497 aa13.42□□□□□ -0.26
SRMP1-201ENST00000398959 CNGA1P29973 690 aa13.42□□□□□ -0.26
SRMP1-201ENST00000398959 ADD2P35612 726 aa13.42□□□□□ -0.26
SRMP1-201ENST00000398959 GRB14Q14449 540 aa13.42□□□□□ -0.26
SRMP1-201ENST00000398959 COG2Q14746 738 aa13.42□□□□□ -0.26
SRMP1-201ENST00000398959 LHX8Q68G74 356 aa13.42□□□□□ -0.26
SRMP1-201ENST00000398959 SLC44A5Q8NCS7 719 aa13.42□□□□□ -0.26
SRMP1-201ENST00000398959 DYNLL2Q96FJ2 89 aa13.42□□□□□ -0.26
SRMP1-201ENST00000398959 GDF15Q99988 308 aa13.42□□□□□ -0.26
SRMP1-201ENST00000398959 ARHGEF10LQ9HCE6 1279 aa13.42□□□□□ -0.26
SRMP1-201ENST00000398959 ATP8A2Q9NTI2 1148 aa13.42□□□□□ -0.26
SRMP1-201ENST00000398959 HOXC10Q9NYD6 342 aa13.42□□□□□ -0.26
SRMP1-201ENST00000398959 FLRT1Q9NZU1 646 aa13.42□□□□□ -0.26
SRMP1-201ENST00000398959 LTBP2Q14767 1821 aa13.41□□□□□ -0.26
SRMP1-201ENST00000398959 PRKAB2O43741 272 aa13.41□□□□□ -0.26
SRMP1-201ENST00000398959 ATP5JP18859 108 aa13.41□□□□□ -0.26
SRMP1-201ENST00000398959 BMP8BP34820 402 aa13.41□□□□□ -0.26
SRMP1-201ENST00000398959 SLFNL1Q499Z3 407 aa13.41□□□□□ -0.26
SRMP1-201ENST00000398959 DPP9Q86TI2 863 aa13.41□□□□□ -0.26
SRMP1-201ENST00000398959 DDRGK1Q96HY6 314 aa13.41□□□□□ -0.26
SRMP1-201ENST00000398959 SH2D4AQ9H788 454 aa13.41□□□□□ -0.26
SRMP1-201ENST00000398959 SOX1O00570 391 aaPredicted RBP13.4□□□□□ -0.26
SRMP1-201ENST00000398959 MSCO60682 206 aa13.4□□□□□ -0.26
SRMP1-201ENST00000398959 HOXC6P09630 235 aa13.4□□□□□ -0.26
SRMP1-201ENST00000398959 COL6A1P12109 1028 aa13.4□□□□□ -0.26
SRMP1-201ENST00000398959 AKR1B1P15121 316 aa13.4□□□□□ -0.26
SRMP1-201ENST00000398959 MAGEA10P43363 369 aaPredicted RBP13.4□□□□□ -0.26
SRMP1-201ENST00000398959 ICA1Q05084 483 aa13.4□□□□□ -0.26
SRMP1-201ENST00000398959 PLS1Q14651 629 aa13.4□□□□□ -0.26
SRMP1-201ENST00000398959 ZSCAN25Q6NSZ9 544 aa13.4□□□□□ -0.26
SRMP1-201ENST00000398959 SAMD1Q6SPF0 538 aaPredicted RBP13.4□□□□□ -0.26
SRMP1-201ENST00000398959 NPLOC4Q8TAT6 608 aa13.4□□□□□ -0.26
SRMP1-201ENST00000398959 LPAR1Q92633 364 aa13.4□□□□□ -0.26
SRMP1-201ENST00000398959 LRCH3Q96II8 777 aa13.4□□□□□ -0.26
SRMP1-201ENST00000398959 HAUS7Q99871 368 aa13.4□□□□□ -0.26
SRMP1-201ENST00000398959 MOV10L1Q9BXT6 1211 aaKnown RBP13.4□□□□□ -0.26
SRMP1-201ENST00000398959 LRRCC1Q9C099 1032 aa13.4□□□□□ -0.26
SRMP1-201ENST00000398959 SPATC1LQ9H0A9 340 aa13.4□□□□□ -0.26
SRMP1-201ENST00000398959 RCAN3Q9UKA8 241 aa13.4□□□□□ -0.26
SRMP1-201ENST00000398959 STRNO43815 780 aa13.39□□□□□ -0.27
SRMP1-201ENST00000398959 FLOT1O75955 427 aa13.39□□□□□ -0.27
SRMP1-201ENST00000398959 ADORA2AP29274 412 aa13.39□□□□□ -0.27
SRMP1-201ENST00000398959 CYP2C19P33261 490 aa13.39□□□□□ -0.27
SRMP1-201ENST00000398959 CDK8P49336 464 aa13.39□□□□□ -0.27
SRMP1-201ENST00000398959 UBE3CQ15386 1083 aa13.39□□□□□ -0.27
SRMP1-201ENST00000398959 LRRC26Q2I0M4 334 aa13.39□□□□□ -0.27
SRMP1-201ENST00000398959 CLEC10AQ8IUN9 316 aa13.39□□□□□ -0.27
SRMP1-201ENST00000398959 SPICE1Q8N0Z3 855 aa13.39□□□□□ -0.27
SRMP1-201ENST00000398959 MB21D1Q8N884 522 aa13.39□□□□□ -0.27
SRMP1-201ENST00000398959 SENP6Q9GZR1 1112 aaPredicted RBP13.39□□□□□ -0.27
SRMP1-201ENST00000398959 DDX20Q9UHI6 824 aaKnown RBP13.39□□□□□ -0.27
SRMP1-201ENST00000398959 SLC4A4Q9Y6R1 1079 aa13.39□□□□□ -0.27
SRMP1-201ENST00000398959 MCM3APO60318 1980 aa13.39□□□□□ -0.27
SRMP1-201ENST00000398959 COL6A3P12111 3177 aa13.38□□□□□ -0.27
SRMP1-201ENST00000398959 CYP2D7A0A087X1C5 515 aa13.38□□□□□ -0.27
SRMP1-201ENST00000398959 USP17L12C9JPN9 530 aa13.38□□□□□ -0.27
SRMP1-201ENST00000398959 USP17L21D6R901 530 aa13.38□□□□□ -0.27
SRMP1-201ENST00000398959 ERCC3P19447 782 aa13.38□□□□□ -0.27
SRMP1-201ENST00000398959 DSG3P32926 999 aa13.38□□□□□ -0.27
SRMP1-201ENST00000398959 KIAA1755Q5JYT7 1200 aa13.38□□□□□ -0.27
SRMP1-201ENST00000398959 C12orf60Q5U649 245 aa13.38□□□□□ -0.27
SRMP1-201ENST00000398959 NCAPG2Q86XI2 1143 aa13.38□□□□□ -0.27
SRMP1-201ENST00000398959 TDHQ8IZJ6 230 aa13.38□□□□□ -0.27
SRMP1-201ENST00000398959 SHCBP1Q8NEM2 672 aa13.38□□□□□ -0.27
SRMP1-201ENST00000398959 CCDC17Q96LX7 622 aa13.38□□□□□ -0.27
SRMP1-201ENST00000398959 UBE2OQ9C0C9 1292 aaKnown RBP13.38□□□□□ -0.27
SRMP1-201ENST00000398959 VCPKMTQ9H867 229 aa13.38□□□□□ -0.27
SRMP1-201ENST00000398959 SLC5A4Q9NY91 659 aa13.38□□□□□ -0.27
SRMP1-201ENST00000398959 TMX2Q9Y320 296 aa13.38□□□□□ -0.27
SRMP1-201ENST00000398959 WDR46O15213 610 aaKnown RBP13.37□□□□□ -0.27
SRMP1-201ENST00000398959 RAD21O60216 631 aa13.37□□□□□ -0.27
SRMP1-201ENST00000398959 SMARCA5O60264 1052 aaPredicted RBP13.37□□□□□ -0.27
SRMP1-201ENST00000398959 CHGBP05060 677 aa13.37□□□□□ -0.27
SRMP1-201ENST00000398959 CYBAP13498 195 aa13.37□□□□□ -0.27
SRMP1-201ENST00000398959 OLFML2BQ68BL8 750 aa13.37□□□□□ -0.27
SRMP1-201ENST00000398959 C16orf86Q6ZW13 317 aa13.37□□□□□ -0.27
SRMP1-201ENST00000398959 ATG4CQ96DT6 458 aa13.37□□□□□ -0.27
SRMP1-201ENST00000398959 MROH8Q9H579 483 aa13.37□□□□□ -0.27
SRMP1-201ENST00000398959 SMIM22K7EJ46 135 aa13.36□□□□□ -0.27
SRMP1-201ENST00000398959 DNM1LO00429 736 aa13.36□□□□□ -0.27
SRMP1-201ENST00000398959 EEF2P13639 858 aaKnown RBP13.36□□□□□ -0.27
SRMP1-201ENST00000398959 MDM2Q00987 491 aaPredicted RBP13.36□□□□□ -0.27
SRMP1-201ENST00000398959 C20orf194Q5TEA3 1177 aa13.36□□□□□ -0.27
SRMP1-201ENST00000398959 SIAH1Q8IUQ4 282 aa13.36□□□□□ -0.27
SRMP1-201ENST00000398959 TRPV1Q8NER1 839 aa13.36□□□□□ -0.27
SRMP1-201ENST00000398959 PUS7LQ9H0K6 701 aaKnown RBP13.36□□□□□ -0.27
SRMP1-201ENST00000398959 KANSL2Q9H9L4 492 aa13.36□□□□□ -0.27
SRMP1-201ENST00000398959 GOPCQ9HD26 462 aa13.36□□□□□ -0.27
SRMP1-201ENST00000398959 ARPP21Q9UBL0 812 aaPredicted RBP13.36□□□□□ -0.27
SRMP1-201ENST00000398959 COBLO75128 1261 aa13.35□□□□□ -0.27
SRMP1-201ENST00000398959 FCER1AP12319 257 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms