RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 GNAT3A8MTJ3 354 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 MATR3P43243 847 aaKnown RBP eCLIP7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 CSE1LP55060 971 aaKnown RBP7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 KIAA0753Q2KHM9 967 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 TSGA10IPQ3SY00 556 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 USP48Q86UV5 1035 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 KIF1BPQ96EK5 621 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 BABAM1Q9NWV8 329 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 PRKAG2Q9UGJ0 569 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 PALD1Q9ULE6 856 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 MAP3K5Q99683 1374 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 CCDC163A0A0D9SF12 145 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 HSPA4P34932 840 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 GNALP38405 381 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 UBE2HP62256 183 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 KBTBD12Q3ZCT8 623 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 FAM182BQ5T319 152 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 NELL1Q92832 810 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 FAM163AQ96GL9 167 aaPredicted RBP7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 MRFAP1L1Q96HT8 127 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 PRIMPOLQ96LW4 560 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 TRERF1Q96PN7 1200 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 SEPT10Q9P0V9 454 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 LIMCH1Q9UPQ0 1083 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 MAP3K19Q56UN5 1328 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 FIBPO43427 364 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 UBXN2AP68543 259 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 EN1Q05925 392 aaPredicted RBP7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 MUM1L1Q5H9M0 696 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 PDCL2Q8N4E4 241 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 ATP11CQ8NB49 1132 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 MIPOL1Q8TD10 442 aa7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 NSFL1CQ9UNZ2 370 aaKnown RBP7.43□□□□□ -1.22
TM9SF4-202ENST00000398022 OVOS2A0A0J9YW53 1432 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 NCAPD2Q15021 1401 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 OVOS2Q6IE36 1432 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 SALL3Q9BXA9 1300 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 C4AP0C0L4 1744 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 C4BP0C0L5 1744 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 ZSCAN22P10073 491 aaPredicted RBP7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 FAM98CQ17RN3 349 aaKnown RBP7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 GNPTABQ3T906 1256 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 TMEM87AQ8NBN3 555 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 MYRIPQ8NFW9 859 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 KCNN1Q92952 543 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 ZSCAN31Q96LW9 406 aaPredicted RBP7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 VPS33BQ9H267 617 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 CCDC68Q9H2F9 335 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 EPB41L4AQ9HCS5 686 aaPredicted RBP7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 IL1RAPL2Q9NP60 686 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 PICK1Q9NRD5 415 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 TNS2Q63HR2 1409 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 PNMA6EA0A0J9YXQ4 647 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 EIF3FO00303 357 aaPredicted RBP7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 STX6O43752 255 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 KIF11P52732 1056 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 GPSM2P81274 684 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 ZBTB17Q13105 803 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 ARHGEF6Q15052 776 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 CCDC186Q7Z3E2 898 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 ZNF280CQ8ND82 737 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 ANKK1Q8NFD2 765 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 ANKRD49Q8WVL7 239 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 MIEF2Q96C03 454 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 ZBTB10Q96DT7 871 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 IER2Q9BTL4 223 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 MRPL42Q9Y6G3 142 aaKnown RBP7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 USP31Q70CQ4 1352 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 AKR1B10O60218 316 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 RGS20O76081 388 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 PDGFRBP09619 1106 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 VAMP1P23763 118 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 MNAT1P51948 309 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 MARSP56192 900 aaKnown RBP7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 AMPD3Q01432 767 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 IQCB1Q15051 598 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 CCSAPQ6IQ19 270 aaPredicted RBP7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 IRGCQ6NXR0 463 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 SUN5Q8TC36 379 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 RBM17Q96I25 401 aaKnown RBP7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 GDPD2Q9HCC8 539 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 SLC30A1Q9Y6M5 507 aa7.42□□□□□ -1.22
TM9SF4-202ENST00000398022 SMTNL1A8MU46 457 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 ORC4O43929 436 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 ZKSCAN1P17029 563 aaPredicted RBP7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 UBASH3AP57075 661 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 GRIK3Q13003 919 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 CNGA3Q16281 694 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 Q3C1V9 767 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 UNC5DQ6UXZ4 953 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 RASGRP2Q7LDG7 609 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 SRLQ86TD4 932 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 LILRB2Q8N423 598 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 TSC1Q92574 1164 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 CHAMP1Q96JM3 812 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 CENPOQ9BU64 300 aa7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 SH2B1Q9NRF2 756 aaPredicted RBP7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.41□□□□□ -1.22
TM9SF4-202ENST00000398022 GLRX3O76003 335 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms