RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 RIOK1Q9BRS2 568 aaKnown RBP19.62■□□□□ 0.73
CUX2-202ENST00000397643 MOV10L1Q9BXT6 1211 aaKnown RBP19.62■□□□□ 0.73
CUX2-202ENST00000397643 C1orf115Q9H7X2 142 aa19.62■□□□□ 0.73
CUX2-202ENST00000397643 A0A1W2PRG0 241 aa19.61■□□□□ 0.73
CUX2-202ENST00000397643 SEPT2Q15019 361 aa19.61■□□□□ 0.73
CUX2-202ENST00000397643 SHHQ15465 462 aa19.61■□□□□ 0.73
CUX2-202ENST00000397643 ZNF697Q5TEC3 545 aa19.61■□□□□ 0.73
CUX2-202ENST00000397643 SLC39A5Q6ZMH5 540 aa19.61■□□□□ 0.73
CUX2-202ENST00000397643 ATP11BQ9Y2G3 1177 aa19.61■□□□□ 0.73
CUX2-202ENST00000397643 TTC28Q96AY4 2481 aa19.61■□□□□ 0.73
CUX2-202ENST00000397643 CDX2Q99626 313 aaPredicted RBP19.6■□□□□ 0.73
CUX2-202ENST00000397643 SPATC1LQ9H0A9 340 aa19.6■□□□□ 0.73
CUX2-202ENST00000397643 CABP5Q9NP86 173 aa19.6■□□□□ 0.73
CUX2-202ENST00000397643 PRKAG2Q9UGJ0 569 aa19.6■□□□□ 0.73
CUX2-202ENST00000397643 COBLO75128 1261 aa19.59■□□□□ 0.73
CUX2-202ENST00000397643 TRIM60Q495X7 471 aa19.59■□□□□ 0.73
CUX2-202ENST00000397643 KIAA1755Q5JYT7 1200 aa19.59■□□□□ 0.73
CUX2-202ENST00000397643 ANO1Q5XXA6 986 aa19.59■□□□□ 0.73
CUX2-202ENST00000397643 DPP9Q86TI2 863 aa19.59■□□□□ 0.73
CUX2-202ENST00000397643 ARRDC4Q8NCT1 418 aa19.59■□□□□ 0.73
CUX2-202ENST00000397643 SHCBP1Q8NEM2 672 aa19.59■□□□□ 0.73
CUX2-202ENST00000397643 PDLIM7Q9NR12 457 aa19.59■□□□□ 0.73
CUX2-202ENST00000397643 SEPT4O43236 478 aa19.58■□□□□ 0.72
CUX2-202ENST00000397643 ERCC3P19447 782 aa19.58■□□□□ 0.72
CUX2-202ENST00000397643 MAP3K12Q12852 859 aa19.58■□□□□ 0.72
CUX2-202ENST00000397643 COG2Q14746 738 aa19.58■□□□□ 0.72
CUX2-202ENST00000397643 TMED8Q6PL24 325 aaPredicted RBP19.58■□□□□ 0.72
CUX2-202ENST00000397643 BADQ92934 168 aa19.58■□□□□ 0.72
CUX2-202ENST00000397643 TTYH1Q9H313 450 aaPredicted RBP19.58■□□□□ 0.72
CUX2-202ENST00000397643 PARP14Q460N5 1801 aa19.58■□□□□ 0.72
CUX2-202ENST00000397643 KBTBD13C9JR72 458 aa19.57■□□□□ 0.72
CUX2-202ENST00000397643 STRNO43815 780 aa19.57■□□□□ 0.72
CUX2-202ENST00000397643 ZKSCAN2Q63HK3 967 aa19.57■□□□□ 0.72
CUX2-202ENST00000397643 SH3RF1Q7Z6J0 888 aa19.57■□□□□ 0.72
CUX2-202ENST00000397643 SEMA6BQ9H3T3 888 aa19.57■□□□□ 0.72
CUX2-202ENST00000397643 PRDM5Q9NQX1 630 aaPredicted RBP19.57■□□□□ 0.72
CUX2-202ENST00000397643 TRIM43BA6NCK2 446 aa19.56■□□□□ 0.72
CUX2-202ENST00000397643 LRRC41Q15345 812 aa19.56■□□□□ 0.72
CUX2-202ENST00000397643 FAM47AQ5JRC9 791 aa19.56■□□□□ 0.72
CUX2-202ENST00000397643 PRAMEF19Q5SWL8 479 aa19.56■□□□□ 0.72
CUX2-202ENST00000397643 C1orf53Q5VUE5 145 aa19.56■□□□□ 0.72
CUX2-202ENST00000397643 TRIM43Q96BQ3 446 aaPredicted RBP19.56■□□□□ 0.72
CUX2-202ENST00000397643 TANGO6Q9C0B7 1094 aa19.56■□□□□ 0.72
CUX2-202ENST00000397643 HOXC10Q9NYD6 342 aa19.56■□□□□ 0.72
CUX2-202ENST00000397643 POLR3DP05423 398 aaPredicted RBP19.55■□□□□ 0.72
CUX2-202ENST00000397643 ADCYAP1R1P41586 468 aa19.55■□□□□ 0.72
CUX2-202ENST00000397643 SMAD3P84022 425 aaKnown RBP19.55■□□□□ 0.72
CUX2-202ENST00000397643 ABRAQ8N0Z2 381 aa19.55■□□□□ 0.72
CUX2-202ENST00000397643 MB21D1Q8N884 522 aa19.55■□□□□ 0.72
CUX2-202ENST00000397643 SLC44A5Q8NCS7 719 aa19.55■□□□□ 0.72
CUX2-202ENST00000397643 MAFAQ8NHW3 353 aaPredicted RBP19.55■□□□□ 0.72
CUX2-202ENST00000397643 MAGEB6P1A0A0J9YX57 407 aa19.54■□□□□ 0.72
CUX2-202ENST00000397643 RLBP1P12271 317 aa19.54■□□□□ 0.72
CUX2-202ENST00000397643 ITGB8P26012 769 aa19.54■□□□□ 0.72
CUX2-202ENST00000397643 DSG3P32926 999 aa19.54■□□□□ 0.72
CUX2-202ENST00000397643 SIAH1Q8IUQ4 282 aa19.54■□□□□ 0.72
CUX2-202ENST00000397643 ATG4CQ96DT6 458 aa19.54■□□□□ 0.72
CUX2-202ENST00000397643 MAML3Q96JK9 1138 aa19.54■□□□□ 0.72
CUX2-202ENST00000397643 MCM9Q9NXL9 1143 aa19.54■□□□□ 0.72
CUX2-202ENST00000397643 MUC3AQ02505 3323 aa19.54■□□□□ 0.72
CUX2-202ENST00000397643 MPHOSPH10O00566 681 aaKnown RBP19.53■□□□□ 0.72
CUX2-202ENST00000397643 CYP2D6P10635 497 aa19.53■□□□□ 0.72
CUX2-202ENST00000397643 PDE6AP16499 860 aa19.53■□□□□ 0.72
CUX2-202ENST00000397643 CLEC10AQ8IUN9 316 aa19.53■□□□□ 0.72
CUX2-202ENST00000397643 SDR42E1Q8WUS8 393 aa19.53■□□□□ 0.72
CUX2-202ENST00000397643 MYLIPQ8WY64 445 aa19.53■□□□□ 0.72
CUX2-202ENST00000397643 FERMT2Q96AC1 680 aa19.53■□□□□ 0.72
CUX2-202ENST00000397643 MROH8Q9H579 483 aa19.53■□□□□ 0.72
CUX2-202ENST00000397643 DCP1AQ9NPI6 582 aaPredicted RBP19.53■□□□□ 0.72
CUX2-202ENST00000397643 PHF24Q9UPV7 400 aa19.53■□□□□ 0.72
CUX2-202ENST00000397643 SMCHD1A6NHR9 2005 aa19.52■□□□□ 0.72
CUX2-202ENST00000397643 TCRBV5S4A2TA0A5A2 114 aa19.52■□□□□ 0.72
CUX2-202ENST00000397643 MYCNP04198 464 aaPredicted RBP19.52■□□□□ 0.72
CUX2-202ENST00000397643 EPHB4P54760 987 aa19.52■□□□□ 0.72
CUX2-202ENST00000397643 TLE2Q04725 743 aa19.52■□□□□ 0.72
CUX2-202ENST00000397643 CEP85Q6P2H3 762 aa19.52■□□□□ 0.72
CUX2-202ENST00000397643 TMEM179Q6ZVK1 233 aa19.52■□□□□ 0.72
CUX2-202ENST00000397643 AACSQ86V21 672 aa19.52■□□□□ 0.72
CUX2-202ENST00000397643 CRNKL1Q9BZJ0 848 aaKnown RBP19.52■□□□□ 0.72
CUX2-202ENST00000397643 ROBO3Q96MS0 1386 aa19.52■□□□□ 0.72
CUX2-202ENST00000397643 COL11A1P12107 1806 aaPredicted RBP19.51■□□□□ 0.71
CUX2-202ENST00000397643 ZNFX1Q9P2E3 1918 aaKnown RBP19.51■□□□□ 0.71
CUX2-202ENST00000397643 FLOT1O75955 427 aa19.51■□□□□ 0.71
CUX2-202ENST00000397643 NCAPG2Q86XI2 1143 aa19.51■□□□□ 0.71
CUX2-202ENST00000397643 SPICE1Q8N0Z3 855 aa19.51■□□□□ 0.71
CUX2-202ENST00000397643 LCORLQ8N3X6 602 aa19.51■□□□□ 0.71
CUX2-202ENST00000397643 SLC5A4Q9NY91 659 aa19.51■□□□□ 0.71
CUX2-202ENST00000397643 EXOC6BQ9Y2D4 811 aa19.51■□□□□ 0.71
CUX2-202ENST00000397643 TMX2Q9Y320 296 aa19.51■□□□□ 0.71
CUX2-202ENST00000397643 MYH8P13535 1937 aa19.51■□□□□ 0.71
CUX2-202ENST00000397643 AKR1B1P15121 316 aa19.5■□□□□ 0.71
CUX2-202ENST00000397643 PLS1Q14651 629 aa19.5■□□□□ 0.71
CUX2-202ENST00000397643 TMEM132BQ14DG7 1078 aa19.5■□□□□ 0.71
CUX2-202ENST00000397643 SLC9C2Q5TAH2 1124 aa19.5■□□□□ 0.71
CUX2-202ENST00000397643 ITPRIPQ8IWB1 547 aa19.5■□□□□ 0.71
CUX2-202ENST00000397643 DYNLL2Q96FJ2 89 aa19.5■□□□□ 0.71
CUX2-202ENST00000397643 VCPKMTQ9H867 229 aa19.5■□□□□ 0.71
CUX2-202ENST00000397643 ZNF532Q9HCE3 1301 aa19.5■□□□□ 0.71
CUX2-202ENST00000397643 SMIM22K7EJ46 135 aa19.49■□□□□ 0.71
CUX2-202ENST00000397643 ERC1Q8IUD2 1116 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms