RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 MFAP1P55081 439 aaKnown RBP17.32■□□□□ 0.36
SEC13-208ENST00000397109 ERVK-9P63128 1117 aa17.32■□□□□ 0.36
SEC13-208ENST00000397109 ERVK-24P63145 666 aa17.32■□□□□ 0.36
SEC13-208ENST00000397109 ATP2B2Q01814 1243 aa17.32■□□□□ 0.36
SEC13-208ENST00000397109 PPARAQ07869 468 aa17.32■□□□□ 0.36
SEC13-208ENST00000397109 CCAR1Q8IX12 1150 aaKnown RBP17.32■□□□□ 0.36
SEC13-208ENST00000397109 SLAIN1Q8ND83 568 aa17.32■□□□□ 0.36
SEC13-208ENST00000397109 FAM227BQ96M60 508 aa17.32■□□□□ 0.36
SEC13-208ENST00000397109 HOXC10Q9NYD6 342 aa17.32■□□□□ 0.36
SEC13-208ENST00000397109 GABRQQ9UN88 632 aa17.32■□□□□ 0.36
SEC13-208ENST00000397109 A0A0D9SFI3 127 aa17.31■□□□□ 0.36
SEC13-208ENST00000397109 SDSP20132 328 aa17.31■□□□□ 0.36
SEC13-208ENST00000397109 MAPK4P31152 587 aa17.31■□□□□ 0.36
SEC13-208ENST00000397109 NMIQ13287 307 aaPredicted RBP17.31■□□□□ 0.36
SEC13-208ENST00000397109 COG2Q14746 738 aa17.31■□□□□ 0.36
SEC13-208ENST00000397109 CLEC10AQ8IUN9 316 aa17.31■□□□□ 0.36
SEC13-208ENST00000397109 SH3TC2Q8TF17 1288 aa17.31■□□□□ 0.36
SEC13-208ENST00000397109 PAGR1Q9BTK6 254 aa17.31■□□□□ 0.36
SEC13-208ENST00000397109 GOPCQ9HD26 462 aa17.31■□□□□ 0.36
SEC13-208ENST00000397109 TXNRD2Q9NNW7 524 aa17.31■□□□□ 0.36
SEC13-208ENST00000397109 NYAP2Q9P242 653 aa17.31■□□□□ 0.36
SEC13-208ENST00000397109 WDR46O15213 610 aaKnown RBP17.31■□□□□ 0.36
SEC13-208ENST00000397109 FOXP2O15409 715 aa17.31■□□□□ 0.36
SEC13-208ENST00000397109 CCNA1P78396 465 aa17.31■□□□□ 0.36
SEC13-208ENST00000397109 PXYLP1Q8TE99 480 aa17.31■□□□□ 0.36
SEC13-208ENST00000397109 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.31■□□□□ 0.36
SEC13-208ENST00000397109 TANGO6Q9C0B7 1094 aa17.31■□□□□ 0.36
SEC13-208ENST00000397109 ADCY3O60266 1144 aa17.3■□□□□ 0.36
SEC13-208ENST00000397109 UBXN2AP68543 259 aa17.3■□□□□ 0.36
SEC13-208ENST00000397109 Q3C1V9 767 aa17.3■□□□□ 0.36
SEC13-208ENST00000397109 VPS53Q5VIR6 699 aa17.3■□□□□ 0.36
SEC13-208ENST00000397109 DIAPH3Q9NSV4 1193 aa17.3■□□□□ 0.36
SEC13-208ENST00000397109 BIN2Q9UBW5 565 aaPredicted RBP17.3■□□□□ 0.36
SEC13-208ENST00000397109 ANAPC4Q9UJX5 808 aa17.3■□□□□ 0.36
SEC13-208ENST00000397109 CCDC171Q6TFL3 1326 aa17.29■□□□□ 0.36
SEC13-208ENST00000397109 SPDYE16A6NNV3 312 aaPredicted RBP17.29■□□□□ 0.36
SEC13-208ENST00000397109 PRDM1O75626 825 aa17.29■□□□□ 0.36
SEC13-208ENST00000397109 PDE4AP27815 886 aa17.29■□□□□ 0.36
SEC13-208ENST00000397109 KIAA1755Q5JYT7 1200 aa17.29■□□□□ 0.36
SEC13-208ENST00000397109 PPP4R3BQ5MIZ7 849 aa17.29■□□□□ 0.36
SEC13-208ENST00000397109 MB21D1Q8N884 522 aa17.29■□□□□ 0.36
SEC13-208ENST00000397109 NEDD1Q8NHV4 660 aa17.29■□□□□ 0.36
SEC13-208ENST00000397109 GJD2Q9UKL4 321 aa17.29■□□□□ 0.36
SEC13-208ENST00000397109 GREB1LQ9C091 1923 aaPredicted RBP17.28■□□□□ 0.36
SEC13-208ENST00000397109 IGKV6D-41A0A0C4DH26 115 aa17.28■□□□□ 0.36
SEC13-208ENST00000397109 FGAP02671 866 aa17.28■□□□□ 0.36
SEC13-208ENST00000397109 TSPY3P0CV98 308 aa17.28■□□□□ 0.36
SEC13-208ENST00000397109 TSPY8P0CW00 308 aa17.28■□□□□ 0.36
SEC13-208ENST00000397109 HSPD1P10809 573 aaKnown RBP17.28■□□□□ 0.36
SEC13-208ENST00000397109 POTEEQ6S8J3 1075 aa17.28■□□□□ 0.36
SEC13-208ENST00000397109 ZNF589Q86UQ0 364 aaPredicted RBP17.28■□□□□ 0.36
SEC13-208ENST00000397109 SPICE1Q8N0Z3 855 aa17.28■□□□□ 0.36
SEC13-208ENST00000397109 SOCS4Q8WXH5 440 aa17.28■□□□□ 0.36
SEC13-208ENST00000397109 CWC22Q9HCG8 908 aaKnown RBP17.28■□□□□ 0.36
SEC13-208ENST00000397109 SYNPO2Q9UMS6 1093 aa17.28■□□□□ 0.36
SEC13-208ENST00000397109 ZMYM6O95789 1325 aa17.28■□□□□ 0.36
SEC13-208ENST00000397109 PLIN4Q96Q06 1357 aa17.27■□□□□ 0.36
SEC13-208ENST00000397109 POTEFA5A3E0 1075 aa17.27■□□□□ 0.36
SEC13-208ENST00000397109 PEX10O60683 326 aa17.27■□□□□ 0.36
SEC13-208ENST00000397109 CNMDO75829 334 aa17.27■□□□□ 0.36
SEC13-208ENST00000397109 FLOT1O75955 427 aa17.27■□□□□ 0.36
SEC13-208ENST00000397109 DSG3P32926 999 aa17.27■□□□□ 0.36
SEC13-208ENST00000397109 PLEKHH3Q7Z736 793 aa17.27■□□□□ 0.36
SEC13-208ENST00000397109 MKL1Q969V6 931 aa17.27■□□□□ 0.36
SEC13-208ENST00000397109 NUDT12Q9BQG2 462 aa17.27■□□□□ 0.36
SEC13-208ENST00000397109 MTMR4Q9NYA4 1195 aa17.27■□□□□ 0.36
SEC13-208ENST00000397109 CLIP2Q9UDT6 1046 aa17.27■□□□□ 0.36
SEC13-208ENST00000397109 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.27■□□□□ 0.36
SEC13-208ENST00000397109 RBM19Q9Y4C8 960 aaKnown RBP17.27■□□□□ 0.36
SEC13-208ENST00000397109 TTLL1O95922 423 aa17.26■□□□□ 0.35
SEC13-208ENST00000397109 TFAP4Q01664 338 aa17.26■□□□□ 0.35
SEC13-208ENST00000397109 CTDSPL2Q05D32 466 aa17.26■□□□□ 0.35
SEC13-208ENST00000397109 TTC22Q5TAA0 569 aa17.26■□□□□ 0.35
SEC13-208ENST00000397109 CWC27Q6UX04 472 aaKnown RBP17.26■□□□□ 0.35
SEC13-208ENST00000397109 GPR142Q7Z601 462 aa17.26■□□□□ 0.35
SEC13-208ENST00000397109 CEP95Q96GE4 821 aa17.26■□□□□ 0.35
SEC13-208ENST00000397109 PORCNQ9H237 461 aa17.26■□□□□ 0.35
SEC13-208ENST00000397109 BTBD7Q9P203 1132 aa17.26■□□□□ 0.35
SEC13-208ENST00000397109 RBBP6Q7Z6E9 1792 aaKnown RBP17.26■□□□□ 0.35
SEC13-208ENST00000397109 F5H6K3 240 aa17.25■□□□□ 0.35
SEC13-208ENST00000397109 ORC4O43929 436 aa17.25■□□□□ 0.35
SEC13-208ENST00000397109 RAD21O60216 631 aa17.25■□□□□ 0.35
SEC13-208ENST00000397109 MYCP01106 439 aaPredicted RBP17.25■□□□□ 0.35
SEC13-208ENST00000397109 ELNP15502 786 aa17.25■□□□□ 0.35
SEC13-208ENST00000397109 KLRC3Q07444 240 aa17.25■□□□□ 0.35
SEC13-208ENST00000397109 TRMT44Q8IYL2 757 aaKnown RBP17.25■□□□□ 0.35
SEC13-208ENST00000397109 TSPY2A6NKD2 308 aa17.24■□□□□ 0.35
SEC13-208ENST00000397109 FGRP09769 529 aa17.24■□□□□ 0.35
SEC13-208ENST00000397109 PCP11498 1178 aaKnown RBP17.24■□□□□ 0.35
SEC13-208ENST00000397109 XRCC5P13010 732 aaKnown RBP17.24■□□□□ 0.35
SEC13-208ENST00000397109 MTFR1Q15390 333 aa17.24■□□□□ 0.35
SEC13-208ENST00000397109 FAM47AQ5JRC9 791 aa17.24■□□□□ 0.35
SEC13-208ENST00000397109 NKX2-3Q8TAU0 364 aa17.24■□□□□ 0.35
SEC13-208ENST00000397109 CENPFP49454 3210 aa17.24■□□□□ 0.35
SEC13-208ENST00000397109 RLFQ13129 1914 aa17.24■□□□□ 0.35
SEC13-208ENST00000397109 MYH4Q9Y623 1939 aa17.24■□□□□ 0.35
SEC13-208ENST00000397109 NDUFB10O96000 172 aa17.24■□□□□ 0.35
SEC13-208ENST00000397109 INHAP05111 366 aa17.24■□□□□ 0.35
SEC13-208ENST00000397109 CCL5P13501 91 aa17.24■□□□□ 0.35
SEC13-208ENST00000397109 EN2P19622 333 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms