RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 MTMR7Q9Y216 660 aa11.79□□□□□ -0.52
TUBB-208ENST00000396389 URI1O94763 535 aaPredicted RBP11.79□□□□□ -0.52
TUBB-208ENST00000396389 PDCP20941 246 aa11.79□□□□□ -0.52
TUBB-208ENST00000396389 TNNT3P45378 269 aaPredicted RBP11.79□□□□□ -0.52
TUBB-208ENST00000396389 RAB11FIP4Q86YS3 637 aa11.79□□□□□ -0.52
TUBB-208ENST00000396389 IFNL3Q8IZI9 196 aa11.79□□□□□ -0.52
TUBB-208ENST00000396389 CARD6Q9BX69 1037 aa11.79□□□□□ -0.52
TUBB-208ENST00000396389 XPO4Q9C0E2 1151 aaKnown RBP11.79□□□□□ -0.52
TUBB-208ENST00000396389 RSPH14Q9UHP6 348 aa11.79□□□□□ -0.52
TUBB-208ENST00000396389 PATL2C9JE40 543 aaKnown RBP11.78□□□□□ -0.52
TUBB-208ENST00000396389 BAG3O95817 575 aa11.78□□□□□ -0.52
TUBB-208ENST00000396389 RESTQ13127 1097 aa11.78□□□□□ -0.52
TUBB-208ENST00000396389 TNIP1Q15025 636 aa11.78□□□□□ -0.52
TUBB-208ENST00000396389 ZKSCAN3Q9BRR0 538 aa11.78□□□□□ -0.52
TUBB-208ENST00000396389 TM6SF1Q9BZW5 370 aa11.78□□□□□ -0.52
TUBB-208ENST00000396389 MYOZ2Q9NPC6 264 aa11.78□□□□□ -0.52
TUBB-208ENST00000396389 MYH13Q9UKX3 1938 aa11.78□□□□□ -0.52
TUBB-208ENST00000396389 POTEIP0CG38 1075 aa11.78□□□□□ -0.52
TUBB-208ENST00000396389 POTEJP0CG39 1038 aa11.78□□□□□ -0.52
TUBB-208ENST00000396389 PLCD1P51178 756 aa11.78□□□□□ -0.52
TUBB-208ENST00000396389 STX1AQ16623 288 aa11.78□□□□□ -0.52
TUBB-208ENST00000396389 SARM1Q6SZW1 724 aa11.78□□□□□ -0.52
TUBB-208ENST00000396389 TMCO3Q6UWJ1 677 aa11.78□□□□□ -0.52
TUBB-208ENST00000396389 UBXN4Q92575 508 aa11.78□□□□□ -0.52
TUBB-208ENST00000396389 WNT10BO00744 389 aa11.77□□□□□ -0.52
TUBB-208ENST00000396389 EPB41L2O43491 1005 aaKnown RBP11.77□□□□□ -0.52
TUBB-208ENST00000396389 GRIN3BO60391 1043 aa11.77□□□□□ -0.52
TUBB-208ENST00000396389 GSTO1P78417 241 aa11.77□□□□□ -0.52
TUBB-208ENST00000396389 MIGA2Q7L4E1 593 aa11.77□□□□□ -0.52
TUBB-208ENST00000396389 MAP4K1Q92918 833 aa11.77□□□□□ -0.52
TUBB-208ENST00000396389 USP28Q96RU2 1077 aa11.77□□□□□ -0.52
TUBB-208ENST00000396389 L2HGDHQ9H9P8 463 aa11.77□□□□□ -0.52
TUBB-208ENST00000396389 DCP1AQ9NPI6 582 aaPredicted RBP11.77□□□□□ -0.52
TUBB-208ENST00000396389 A0A1B0GVL5 298 aa11.77□□□□□ -0.53
TUBB-208ENST00000396389 POLR3DP05423 398 aaPredicted RBP11.77□□□□□ -0.53
TUBB-208ENST00000396389 RPS6KB1P23443 525 aa11.77□□□□□ -0.53
TUBB-208ENST00000396389 RHBDL3P58872 404 aa11.77□□□□□ -0.53
TUBB-208ENST00000396389 CRNKL1Q9BZJ0 848 aaKnown RBP11.77□□□□□ -0.53
TUBB-208ENST00000396389 TMEM39BQ9GZU3 492 aa11.77□□□□□ -0.53
TUBB-208ENST00000396389 HDAC9Q9UKV0 1011 aa11.77□□□□□ -0.53
TUBB-208ENST00000396389 SALL1Q9NSC2 1324 aa11.77□□□□□ -0.53
TUBB-208ENST00000396389 CLGNO14967 610 aa11.76□□□□□ -0.53
TUBB-208ENST00000396389 NEMFO60524 1076 aa11.76□□□□□ -0.53
TUBB-208ENST00000396389 ZRANB2O95218 330 aaKnown RBP eCLIP11.76□□□□□ -0.53
TUBB-208ENST00000396389 OAS2P29728 719 aaKnown RBP11.76□□□□□ -0.53
TUBB-208ENST00000396389 SHROOM1Q2M3G4 852 aaPredicted RBP11.76□□□□□ -0.53
TUBB-208ENST00000396389 DPCR1Q3MIW9 517 aa11.76□□□□□ -0.53
TUBB-208ENST00000396389 GPHNQ9NQX3 736 aaPredicted RBP11.76□□□□□ -0.53
TUBB-208ENST00000396389 ORC3Q9UBD5 711 aaPredicted RBP11.76□□□□□ -0.53
TUBB-208ENST00000396389 BRCA1P38398 1863 aaKnown RBP11.76□□□□□ -0.53
TUBB-208ENST00000396389 ANKRD65E5RJM6 399 aa11.76□□□□□ -0.53
TUBB-208ENST00000396389 ZNF213O14771 459 aa11.76□□□□□ -0.53
TUBB-208ENST00000396389 LDHCP07864 332 aa11.76□□□□□ -0.53
TUBB-208ENST00000396389 ADD1P35611 737 aaKnown RBP11.76□□□□□ -0.53
TUBB-208ENST00000396389 ME1P48163 572 aa11.76□□□□□ -0.53
TUBB-208ENST00000396389 CCT2P78371 535 aaKnown RBP11.76□□□□□ -0.53
TUBB-208ENST00000396389 GNL2Q13823 731 aaKnown RBP11.76□□□□□ -0.53
TUBB-208ENST00000396389 DPY19L2Q6NUT2 758 aa11.76□□□□□ -0.53
TUBB-208ENST00000396389 STOX1Q6ZVD7 989 aa11.76□□□□□ -0.53
TUBB-208ENST00000396389 TBC1D10CQ8IV04 446 aa11.76□□□□□ -0.53
TUBB-208ENST00000396389 GMLQ99445 158 aa11.76□□□□□ -0.53
TUBB-208ENST00000396389 SDF4Q9BRK5 362 aa11.76□□□□□ -0.53
TUBB-208ENST00000396389 ZSWIM4Q9H7M6 989 aa11.76□□□□□ -0.53
TUBB-208ENST00000396389 DLEC1Q9Y238 1755 aa11.76□□□□□ -0.53
TUBB-208ENST00000396389 GPR75-ASB3A0A0A6YYF3 556 aa11.76□□□□□ -0.53
TUBB-208ENST00000396389 DCAF8L1A6NGE4 600 aa11.76□□□□□ -0.53
TUBB-208ENST00000396389 SPDYE2BA6NHP3 402 aa11.76□□□□□ -0.53
TUBB-208ENST00000396389 KINO60870 393 aaKnown RBP11.76□□□□□ -0.53
TUBB-208ENST00000396389 WDHD1O75717 1129 aaPredicted RBP11.76□□□□□ -0.53
TUBB-208ENST00000396389 SPDYE6P0CI01 402 aa11.76□□□□□ -0.53
TUBB-208ENST00000396389 FMR1Q06787 632 aaKnown RBP eCLIP11.76□□□□□ -0.53
TUBB-208ENST00000396389 HSP90AA4PQ58FG1 418 aa11.76□□□□□ -0.53
TUBB-208ENST00000396389 ANGEL2Q5VTE6 544 aaKnown RBP11.76□□□□□ -0.53
TUBB-208ENST00000396389 FSIP1Q8NA03 581 aa11.76□□□□□ -0.53
TUBB-208ENST00000396389 PRDM16Q9HAZ2 1276 aa11.76□□□□□ -0.53
TUBB-208ENST00000396389 CLEC11AQ9Y240 323 aa11.76□□□□□ -0.53
TUBB-208ENST00000396389 ADAMTSL1Q8N6G6 1762 aa11.75□□□□□ -0.53
TUBB-208ENST00000396389 FLT1P17948 1338 aa11.75□□□□□ -0.53
TUBB-208ENST00000396389 H7C1D1 291 aa11.75□□□□□ -0.53
TUBB-208ENST00000396389 LMOD1P29536 600 aaPredicted RBP11.75□□□□□ -0.53
TUBB-208ENST00000396389 KIF4BQ2VIQ3 1234 aa11.75□□□□□ -0.53
TUBB-208ENST00000396389 FAM47AQ5JRC9 791 aa11.75□□□□□ -0.53
TUBB-208ENST00000396389 OTUD7BQ6GQQ9 843 aa11.75□□□□□ -0.53
TUBB-208ENST00000396389 Q6ZUG5 572 aa11.75□□□□□ -0.53
TUBB-208ENST00000396389 MNS1Q8NEH6 495 aa11.75□□□□□ -0.53
TUBB-208ENST00000396389 NACAP1Q9BZK3 213 aa11.75□□□□□ -0.53
TUBB-208ENST00000396389 NCOA5Q9HCD5 579 aaKnown RBP11.75□□□□□ -0.53
TUBB-208ENST00000396389 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.75□□□□□ -0.53
TUBB-208ENST00000396389 TACC3Q9Y6A5 838 aa11.75□□□□□ -0.53
TUBB-208ENST00000396389 LTBP3Q9NS15 1303 aa11.75□□□□□ -0.53
TUBB-208ENST00000396389 B4E1Z4 1266 aa11.75□□□□□ -0.53
TUBB-208ENST00000396389 ATP1A3P13637 1013 aa11.75□□□□□ -0.53
TUBB-208ENST00000396389 SFPQP23246 707 aaKnown RBP eCLIP11.75□□□□□ -0.53
TUBB-208ENST00000396389 PSMA5P28066 241 aa11.75□□□□□ -0.53
TUBB-208ENST00000396389 HIRAP54198 1017 aaPredicted RBP11.75□□□□□ -0.53
TUBB-208ENST00000396389 CTR9Q6PD62 1173 aa11.75□□□□□ -0.53
TUBB-208ENST00000396389 CLEC10AQ8IUN9 316 aa11.75□□□□□ -0.53
TUBB-208ENST00000396389 GPC2Q8N158 579 aa11.75□□□□□ -0.53
TUBB-208ENST00000396389 KCNB2Q92953 911 aa11.75□□□□□ -0.53
TUBB-208ENST00000396389 DDTLA6NHG4 134 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms