RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 GLRX3O76003 335 aaKnown RBP23.25■■□□□ 1.31
COL11A2-204ENST00000395194 PTPREP23469 700 aa23.25■■□□□ 1.31
COL11A2-204ENST00000395194 ADD2P35612 726 aa23.25■■□□□ 1.31
COL11A2-204ENST00000395194 IVNS1ABPQ9Y6Y0 642 aa23.25■■□□□ 1.31
COL11A2-204ENST00000395194 A0A0G2JMZ2 1700 aa23.25■■□□□ 1.31
COL11A2-204ENST00000395194 DNAH12Q6ZR08 3092 aa23.24■■□□□ 1.31
COL11A2-204ENST00000395194 SOX1O00570 391 aaPredicted RBP23.24■■□□□ 1.31
COL11A2-204ENST00000395194 AKR1B1P15121 316 aa23.24■■□□□ 1.31
COL11A2-204ENST00000395194 ATP5JP18859 108 aa23.24■■□□□ 1.31
COL11A2-204ENST00000395194 KIAA1755Q5JYT7 1200 aa23.24■■□□□ 1.31
COL11A2-204ENST00000395194 SAMD1Q6SPF0 538 aaPredicted RBP23.24■■□□□ 1.31
COL11A2-204ENST00000395194 LBX2Q6XYB7 198 aa23.24■■□□□ 1.31
COL11A2-204ENST00000395194 COL11A1P12107 1806 aaPredicted RBP23.24■■□□□ 1.31
COL11A2-204ENST00000395194 SLC15A5A6NIM6 579 aa23.23■■□□□ 1.31
COL11A2-204ENST00000395194 LHX8Q68G74 356 aa23.23■■□□□ 1.31
COL11A2-204ENST00000395194 TMEM179Q6ZVK1 233 aa23.23■■□□□ 1.31
COL11A2-204ENST00000395194 NPLOC4Q8TAT6 608 aa23.23■■□□□ 1.31
COL11A2-204ENST00000395194 HAUS7Q99871 368 aa23.23■■□□□ 1.31
COL11A2-204ENST00000395194 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.23■■□□□ 1.31
COL11A2-204ENST00000395194 ZNFX1Q9P2E3 1918 aaKnown RBP23.22■■□□□ 1.31
COL11A2-204ENST00000395194 GRB14Q14449 540 aa23.22■■□□□ 1.31
COL11A2-204ENST00000395194 MFSD14CQ5VZR4 134 aa23.22■■□□□ 1.31
COL11A2-204ENST00000395194 SPICE1Q8N0Z3 855 aa23.22■■□□□ 1.31
COL11A2-204ENST00000395194 LRCH3Q96II8 777 aa23.22■■□□□ 1.31
COL11A2-204ENST00000395194 SWAP70Q9UH65 585 aa23.22■■□□□ 1.31
COL11A2-204ENST00000395194 CNGA1P29973 690 aa23.21■■□□□ 1.31
COL11A2-204ENST00000395194 ATP2B2Q01814 1243 aa23.21■■□□□ 1.31
COL11A2-204ENST00000395194 ICA1Q05084 483 aa23.21■■□□□ 1.31
COL11A2-204ENST00000395194 COG2Q14746 738 aa23.21■■□□□ 1.31
COL11A2-204ENST00000395194 GDF15Q99988 308 aa23.21■■□□□ 1.31
COL11A2-204ENST00000395194 MOV10L1Q9BXT6 1211 aaKnown RBP23.21■■□□□ 1.31
COL11A2-204ENST00000395194 CHMP4BQ9H444 224 aaKnown RBP23.21■■□□□ 1.31
COL11A2-204ENST00000395194 ATP8A2Q9NTI2 1148 aa23.21■■□□□ 1.31
COL11A2-204ENST00000395194 USP17L12C9JPN9 530 aa23.2■■□□□ 1.3
COL11A2-204ENST00000395194 USP17L21D6R901 530 aa23.2■■□□□ 1.3
COL11A2-204ENST00000395194 CYP2C19P33261 490 aa23.2■■□□□ 1.3
COL11A2-204ENST00000395194 LRRCC1Q9C099 1032 aa23.2■■□□□ 1.3
COL11A2-204ENST00000395194 ZNF236Q9UL36 1845 aa23.19■■□□□ 1.3
COL11A2-204ENST00000395194 A0A1W2PPC1 479 aa23.19■■□□□ 1.3
COL11A2-204ENST00000395194 FLOT1O75955 427 aa23.19■■□□□ 1.3
COL11A2-204ENST00000395194 COL6A1P12109 1028 aa23.19■■□□□ 1.3
COL11A2-204ENST00000395194 CDK8P49336 464 aa23.19■■□□□ 1.3
COL11A2-204ENST00000395194 PLS1Q14651 629 aa23.19■■□□□ 1.3
COL11A2-204ENST00000395194 LRRC26Q2I0M4 334 aa23.19■■□□□ 1.3
COL11A2-204ENST00000395194 C12orf60Q5U649 245 aa23.19■■□□□ 1.3
COL11A2-204ENST00000395194 AMOTL1Q8IY63 956 aa23.19■■□□□ 1.3
COL11A2-204ENST00000395194 SPATC1LQ9H0A9 340 aa23.19■■□□□ 1.3
COL11A2-204ENST00000395194 ARHGEF10LQ9HCE6 1279 aa23.19■■□□□ 1.3
COL11A2-204ENST00000395194 HOXC10Q9NYD6 342 aa23.19■■□□□ 1.3
COL11A2-204ENST00000395194 SLC4A4Q9Y6R1 1079 aa23.19■■□□□ 1.3
COL11A2-204ENST00000395194 ERCC3P19447 782 aa23.18■■□□□ 1.3
COL11A2-204ENST00000395194 ADORA2AP29274 412 aa23.18■■□□□ 1.3
COL11A2-204ENST00000395194 MAGEA10P43363 369 aaPredicted RBP23.18■■□□□ 1.3
COL11A2-204ENST00000395194 DPP9Q86TI2 863 aa23.18■■□□□ 1.3
COL11A2-204ENST00000395194 SIAH1Q8IUQ4 282 aa23.18■■□□□ 1.3
COL11A2-204ENST00000395194 ATG4CQ96DT6 458 aa23.18■■□□□ 1.3
COL11A2-204ENST00000395194 PUS7LQ9H0K6 701 aaKnown RBP23.18■■□□□ 1.3
COL11A2-204ENST00000395194 HOXC6P09630 235 aa23.17■■□□□ 1.3
COL11A2-204ENST00000395194 UBE3CQ15386 1083 aa23.17■■□□□ 1.3
COL11A2-204ENST00000395194 STK11IPQ8N1F8 1099 aa23.17■■□□□ 1.3
COL11A2-204ENST00000395194 TRPV1Q8NER1 839 aa23.17■■□□□ 1.3
COL11A2-204ENST00000395194 DDRGK1Q96HY6 314 aa23.17■■□□□ 1.3
COL11A2-204ENST00000395194 VCPKMTQ9H867 229 aa23.17■■□□□ 1.3
COL11A2-204ENST00000395194 DDX20Q9UHI6 824 aaKnown RBP23.17■■□□□ 1.3
COL11A2-204ENST00000395194 RAD21O60216 631 aa23.16■■□□□ 1.3
COL11A2-204ENST00000395194 DSG3P32926 999 aa23.16■■□□□ 1.3
COL11A2-204ENST00000395194 ANO1Q5XXA6 986 aa23.16■■□□□ 1.3
COL11A2-204ENST00000395194 TSHZ3Q63HK5 1081 aa23.16■■□□□ 1.3
COL11A2-204ENST00000395194 C16orf86Q6ZW13 317 aa23.16■■□□□ 1.3
COL11A2-204ENST00000395194 NCAPG2Q86XI2 1143 aa23.16■■□□□ 1.3
COL11A2-204ENST00000395194 SH2D4AQ9H788 454 aa23.16■■□□□ 1.3
COL11A2-204ENST00000395194 TMX2Q9Y320 296 aa23.16■■□□□ 1.3
COL11A2-204ENST00000395194 SMCHD1A6NHR9 2005 aa23.15■■□□□ 1.3
COL11A2-204ENST00000395194 CTR9Q6PD62 1173 aa23.15■■□□□ 1.3
COL11A2-204ENST00000395194 LPAR1Q92633 364 aa23.15■■□□□ 1.3
COL11A2-204ENST00000395194 SENP6Q9GZR1 1112 aaPredicted RBP23.15■■□□□ 1.3
COL11A2-204ENST00000395194 PLXNA1Q9UIW2 1896 aa23.15■■□□□ 1.3
COL11A2-204ENST00000395194 COL6A3P12111 3177 aa23.15■■□□□ 1.3
COL11A2-204ENST00000395194 COBLO75128 1261 aa23.14■■□□□ 1.29
COL11A2-204ENST00000395194 EEF2P13639 858 aaKnown RBP23.14■■□□□ 1.29
COL11A2-204ENST00000395194 BMP8BP34820 402 aa23.14■■□□□ 1.29
COL11A2-204ENST00000395194 ATN1P54259 1190 aaPredicted RBP23.14■■□□□ 1.29
COL11A2-204ENST00000395194 ZSCAN25Q6NSZ9 544 aa23.14■■□□□ 1.29
COL11A2-204ENST00000395194 CCDC17Q96LX7 622 aa23.14■■□□□ 1.29
COL11A2-204ENST00000395194 FBXO28Q9NVF7 368 aa23.14■■□□□ 1.29
COL11A2-204ENST00000395194 GREB1LQ9C091 1923 aaPredicted RBP23.14■■□□□ 1.29
COL11A2-204ENST00000395194 WDR46O15213 610 aaKnown RBP23.13■■□□□ 1.29
COL11A2-204ENST00000395194 CYBAP13498 195 aa23.13■■□□□ 1.29
COL11A2-204ENST00000395194 MDM2Q00987 491 aaPredicted RBP23.13■■□□□ 1.29
COL11A2-204ENST00000395194 MB21D1Q8N884 522 aa23.13■■□□□ 1.29
COL11A2-204ENST00000395194 SHCBP1Q8NEM2 672 aa23.13■■□□□ 1.29
COL11A2-204ENST00000395194 UBE2OQ9C0C9 1292 aaKnown RBP23.13■■□□□ 1.29
COL11A2-204ENST00000395194 ECHDC1Q9NTX5 307 aa23.13■■□□□ 1.29
COL11A2-204ENST00000395194 MYH4Q9Y623 1939 aa23.13■■□□□ 1.29
COL11A2-204ENST00000395194 STRNO43815 780 aa23.11■■□□□ 1.29
COL11A2-204ENST00000395194 MSCO60682 206 aa23.11■■□□□ 1.29
COL11A2-204ENST00000395194 MYCNP04198 464 aaPredicted RBP23.11■■□□□ 1.29
COL11A2-204ENST00000395194 TMEM132BQ14DG7 1078 aa23.11■■□□□ 1.29
COL11A2-204ENST00000395194 PRAMEF19Q5SWL8 479 aa23.11■■□□□ 1.29
COL11A2-204ENST00000395194 GJC2Q5T442 439 aaPredicted RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms