RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 CTCFLQ8NI51 663 aaPredicted RBP28.5■■■□□ 2.15
CTF1-202ENST00000395019 PI4KBQ9UBF8 816 aa28.5■■■□□ 2.15
CTF1-202ENST00000395019 MYH8P13535 1937 aa28.49■■■□□ 2.15
CTF1-202ENST00000395019 ATRNL1Q5VV63 1379 aa28.49■■■□□ 2.15
CTF1-202ENST00000395019 FMR1Q06787 632 aaKnown RBP eCLIP28.49■■■□□ 2.15
CTF1-202ENST00000395019 TNFAIP1Q13829 316 aa28.49■■■□□ 2.15
CTF1-202ENST00000395019 SSC5DA1L4H1 1573 aa28.49■■■□□ 2.15
CTF1-202ENST00000395019 SHMT1P34896 483 aa28.48■■■□□ 2.15
CTF1-202ENST00000395019 GUCY1B3Q02153 619 aa28.48■■■□□ 2.15
CTF1-202ENST00000395019 SULF1Q8IWU6 871 aa28.48■■■□□ 2.15
CTF1-202ENST00000395019 ZSCAN29Q8IWY8 852 aaPredicted RBP28.48■■■□□ 2.15
CTF1-202ENST00000395019 PNMA1Q8ND90 353 aa28.48■■■□□ 2.15
CTF1-202ENST00000395019 RNF26Q9BY78 433 aaPredicted RBP28.48■■■□□ 2.15
CTF1-202ENST00000395019 TNNI2P48788 182 aa28.47■■■□□ 2.15
CTF1-202ENST00000395019 KRT85P78386 507 aa28.47■■■□□ 2.15
CTF1-202ENST00000395019 FUT2Q10981 343 aa28.47■■■□□ 2.15
CTF1-202ENST00000395019 KLHL40Q2TBA0 621 aa28.47■■■□□ 2.15
CTF1-202ENST00000395019 NBPF12Q5TAG4 269 aaPredicted RBP28.47■■■□□ 2.15
CTF1-202ENST00000395019 TMTC3Q6ZXV5 915 aa28.47■■■□□ 2.15
CTF1-202ENST00000395019 TMEM47Q9BQJ4 181 aa28.47■■■□□ 2.15
CTF1-202ENST00000395019 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.47■■■□□ 2.15
CTF1-202ENST00000395019 TRAF5O00463 557 aa28.47■■■□□ 2.15
CTF1-202ENST00000395019 DEXIO95424 95 aa28.47■■■□□ 2.15
CTF1-202ENST00000395019 CSPP1Q1MSJ5 1256 aa28.47■■■□□ 2.15
CTF1-202ENST00000395019 FOXP4Q8IVH2 680 aaPredicted RBP28.47■■■□□ 2.15
CTF1-202ENST00000395019 GDPD2Q9HCC8 539 aa28.47■■■□□ 2.15
CTF1-202ENST00000395019 STX8Q9UNK0 236 aa28.47■■■□□ 2.15
CTF1-202ENST00000395019 DDX49Q9Y6V7 483 aaKnown RBP28.47■■■□□ 2.15
CTF1-202ENST00000395019 TCHHQ07283 1943 aa28.46■■■□□ 2.15
CTF1-202ENST00000395019 IGKV6D-41A0A0C4DH26 115 aa28.46■■■□□ 2.15
CTF1-202ENST00000395019 NCLP19338 710 aaKnown RBP28.46■■■□□ 2.15
CTF1-202ENST00000395019 KIF5BP33176 963 aa28.46■■■□□ 2.15
CTF1-202ENST00000395019 OTUD7BQ6GQQ9 843 aa28.46■■■□□ 2.15
CTF1-202ENST00000395019 FAM173BQ6P4H8 233 aa28.46■■■□□ 2.15
CTF1-202ENST00000395019 CEP95Q96GE4 821 aa28.46■■■□□ 2.15
CTF1-202ENST00000395019 AIFM3Q96NN9 605 aa28.46■■■□□ 2.15
CTF1-202ENST00000395019 FAM196BA6NMK8 535 aa28.45■■■□□ 2.14
CTF1-202ENST00000395019 AKR1B1P15121 316 aa28.45■■■□□ 2.14
CTF1-202ENST00000395019 METTL16Q86W50 562 aaKnown RBP28.45■■■□□ 2.14
CTF1-202ENST00000395019 CMTR1Q8N1G2 835 aaKnown RBP28.45■■■□□ 2.14
CTF1-202ENST00000395019 CCDC17Q96LX7 622 aa28.45■■■□□ 2.14
CTF1-202ENST00000395019 CSRNP1Q96S65 589 aa28.45■■■□□ 2.14
CTF1-202ENST00000395019 DNAJC18Q9H819 358 aa28.45■■■□□ 2.14
CTF1-202ENST00000395019 PRPF3O43395 683 aaKnown RBP28.44■■■□□ 2.14
CTF1-202ENST00000395019 PLEKHA8P1O95397 391 aa28.44■■■□□ 2.14
CTF1-202ENST00000395019 TOP1P11387 765 aaKnown RBP28.44■■■□□ 2.14
CTF1-202ENST00000395019 GRM4Q14833 912 aa28.44■■■□□ 2.14
CTF1-202ENST00000395019 CCDC82Q8N4S0 544 aa28.44■■■□□ 2.14
CTF1-202ENST00000395019 GJB4Q9NTQ9 266 aa28.44■■■□□ 2.14
CTF1-202ENST00000395019 FZD1Q9UP38 647 aa28.44■■■□□ 2.14
CTF1-202ENST00000395019 FIBPO43427 364 aa28.43■■■□□ 2.14
CTF1-202ENST00000395019 KRT40Q6A162 431 aa28.43■■■□□ 2.14
CTF1-202ENST00000395019 GUCY1A2P33402 732 aa28.43■■■□□ 2.14
CTF1-202ENST00000395019 AKAP17AQ02040 695 aaKnown RBP28.43■■■□□ 2.14
CTF1-202ENST00000395019 TRIM29Q14134 588 aa28.43■■■□□ 2.14
CTF1-202ENST00000395019 CHADLQ6NUI6 762 aa28.43■■■□□ 2.14
CTF1-202ENST00000395019 CDCA5Q96FF9 252 aa28.43■■■□□ 2.14
CTF1-202ENST00000395019 MTMR4Q9NYA4 1195 aa28.43■■■□□ 2.14
CTF1-202ENST00000395019 TRPM7Q96QT4 1865 aa28.42■■■□□ 2.14
CTF1-202ENST00000395019 UBE2Q2LH0YL09 131 aa28.42■■■□□ 2.14
CTF1-202ENST00000395019 ATL3Q6DD88 541 aa28.42■■■□□ 2.14
CTF1-202ENST00000395019 MIGA2Q7L4E1 593 aa28.42■■■□□ 2.14
CTF1-202ENST00000395019 SRBD1Q8N5C6 995 aaKnown RBP28.42■■■□□ 2.14
CTF1-202ENST00000395019 PPP2R3BQ9Y5P8 575 aa28.42■■■□□ 2.14
CTF1-202ENST00000395019 MBD3O95983 291 aa28.41■■■□□ 2.14
CTF1-202ENST00000395019 GNAQP50148 359 aa28.41■■■□□ 2.14
CTF1-202ENST00000395019 TATDN1Q6P1N9 297 aa28.41■■■□□ 2.14
CTF1-202ENST00000395019 CNTNAP5Q8WYK1 1306 aa28.41■■■□□ 2.14
CTF1-202ENST00000395019 TRIM34Q9BYJ4 488 aa28.41■■■□□ 2.14
CTF1-202ENST00000395019 SCAND2PQ9GZW5 306 aaPredicted RBP28.41■■■□□ 2.14
CTF1-202ENST00000395019 OTOFQ9HC10 1997 aa28.41■■■□□ 2.14
CTF1-202ENST00000395019 PAPPA2Q9BXP8 1791 aa28.41■■■□□ 2.14
CTF1-202ENST00000395019 KIF23Q02241 960 aaPredicted RBP28.4■■■□□ 2.14
CTF1-202ENST00000395019 BRAPQ7Z569 592 aa28.4■■■□□ 2.14
CTF1-202ENST00000395019 GPT2Q8TD30 523 aa28.4■■■□□ 2.14
CTF1-202ENST00000395019 GREB1LQ9C091 1923 aaPredicted RBP28.4■■■□□ 2.14
CTF1-202ENST00000395019 ITGBL1O95965 494 aaPredicted RBP28.4■■■□□ 2.14
CTF1-202ENST00000395019 PPP4R3BQ5MIZ7 849 aa28.4■■■□□ 2.14
CTF1-202ENST00000395019 CFAP45Q9UL16 551 aa28.4■■■□□ 2.14
CTF1-202ENST00000395019 ATAD5Q96QE3 1844 aa28.39■■■□□ 2.14
CTF1-202ENST00000395019 ELP1O95163 1332 aa28.39■■■□□ 2.14
CTF1-202ENST00000395019 PKN1Q16512 942 aa28.39■■■□□ 2.13
CTF1-202ENST00000395019 MAD2L2Q9UI95 211 aa28.39■■■□□ 2.13
CTF1-202ENST00000395019 V9GY48 417 aaPredicted RBP28.39■■■□□ 2.13
CTF1-202ENST00000395019 PALM3A6NDB9 673 aaPredicted RBP28.38■■■□□ 2.13
CTF1-202ENST00000395019 GADD45BO75293 160 aaPredicted RBP28.38■■■□□ 2.13
CTF1-202ENST00000395019 ZNF396Q96N95 335 aaPredicted RBP28.38■■■□□ 2.13
CTF1-202ENST00000395019 TFIP11Q9UBB9 837 aaKnown RBP28.38■■■□□ 2.13
CTF1-202ENST00000395019 TTLL1O95922 423 aa28.37■■■□□ 2.13
CTF1-202ENST00000395019 UBE2HP62256 183 aa28.37■■■□□ 2.13
CTF1-202ENST00000395019 CERKLQ49MI3 558 aaPredicted RBP28.37■■■□□ 2.13
CTF1-202ENST00000395019 LZTS2Q9BRK4 669 aa28.37■■■□□ 2.13
CTF1-202ENST00000395019 RBM27Q9P2N5 1060 aaKnown RBP28.37■■■□□ 2.13
CTF1-202ENST00000395019 HERC5Q9UII4 1024 aaKnown RBP28.37■■■□□ 2.13
CTF1-202ENST00000395019 MYH15Q9Y2K3 1946 aa28.37■■■□□ 2.13
CTF1-202ENST00000395019 PRKG1Q13976 671 aa28.36■■■□□ 2.13
CTF1-202ENST00000395019 RRP1BQ14684 758 aaKnown RBP28.36■■■□□ 2.13
CTF1-202ENST00000395019 STAG2Q8N3U4 1231 aa28.36■■■□□ 2.13
CTF1-202ENST00000395019 KIF28PB7ZC32 967 aa28.36■■■□□ 2.13
CTF1-202ENST00000395019 MPHOSPH10O00566 681 aaKnown RBP28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms