RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 CCDC17Q96LX7 622 aa21.12■□□□□ 0.97
SNRPA1-202ENST00000394082 HAUS7Q99871 368 aa21.12■□□□□ 0.97
SNRPA1-202ENST00000394082 ZNF236Q9UL36 1845 aa21.12■□□□□ 0.97
SNRPA1-202ENST00000394082 MPHOSPH10O00566 681 aaKnown RBP21.11■□□□□ 0.97
SNRPA1-202ENST00000394082 UBE3CQ15386 1083 aa21.11■□□□□ 0.97
SNRPA1-202ENST00000394082 SH2D4AQ9H788 454 aa21.11■□□□□ 0.97
SNRPA1-202ENST00000394082 TMX2Q9Y320 296 aa21.11■□□□□ 0.97
SNRPA1-202ENST00000394082 A0A0G2JMZ2 1700 aa21.1■□□□□ 0.97
SNRPA1-202ENST00000394082 ATP2B2Q01814 1243 aa21.1■□□□□ 0.97
SNRPA1-202ENST00000394082 OLFML2BQ68BL8 750 aa21.1■□□□□ 0.97
SNRPA1-202ENST00000394082 ARMT1Q9H993 441 aa21.1■□□□□ 0.97
SNRPA1-202ENST00000394082 FLRT1Q9NZU1 646 aa21.1■□□□□ 0.97
SNRPA1-202ENST00000394082 RLFQ13129 1914 aa21.1■□□□□ 0.97
SNRPA1-202ENST00000394082 COL6A3P12111 3177 aa21.09■□□□□ 0.97
SNRPA1-202ENST00000394082 APBB1O00213 710 aa21.09■□□□□ 0.97
SNRPA1-202ENST00000394082 EVX2Q03828 476 aa21.09■□□□□ 0.97
SNRPA1-202ENST00000394082 LRIT3Q3SXY7 679 aa21.09■□□□□ 0.97
SNRPA1-202ENST00000394082 C12orf60Q5U649 245 aa21.09■□□□□ 0.97
SNRPA1-202ENST00000394082 WDR78Q5VTH9 848 aa21.09■□□□□ 0.97
SNRPA1-202ENST00000394082 SIAH1Q8IUQ4 282 aa21.09■□□□□ 0.97
SNRPA1-202ENST00000394082 ABRAQ8N0Z2 381 aa21.09■□□□□ 0.97
SNRPA1-202ENST00000394082 MOV10L1Q9BXT6 1211 aaKnown RBP21.09■□□□□ 0.97
SNRPA1-202ENST00000394082 SPATC1LQ9H0A9 340 aa21.09■□□□□ 0.97
SNRPA1-202ENST00000394082 BOLA2Q9H3K6 86 aa21.09■□□□□ 0.97
SNRPA1-202ENST00000394082 ARHGEF10LQ9HCE6 1279 aa21.09■□□□□ 0.97
SNRPA1-202ENST00000394082 DDX20Q9UHI6 824 aaKnown RBP21.09■□□□□ 0.97
SNRPA1-202ENST00000394082 ZMYND8Q9ULU4 1186 aaPredicted RBP21.09■□□□□ 0.97
SNRPA1-202ENST00000394082 FRMPD3Q5JV73 1810 aa21.08■□□□□ 0.97
SNRPA1-202ENST00000394082 MBD4O95243 580 aa21.08■□□□□ 0.97
SNRPA1-202ENST00000394082 DSG3P32926 999 aa21.08■□□□□ 0.97
SNRPA1-202ENST00000394082 ZSCAN25Q6NSZ9 544 aa21.08■□□□□ 0.97
SNRPA1-202ENST00000394082 AMOTL1Q8IY63 956 aa21.08■□□□□ 0.97
SNRPA1-202ENST00000394082 SLC44A5Q8NCS7 719 aa21.08■□□□□ 0.97
SNRPA1-202ENST00000394082 NPLOC4Q8TAT6 608 aa21.08■□□□□ 0.97
SNRPA1-202ENST00000394082 DDRGK1Q96HY6 314 aa21.08■□□□□ 0.97
SNRPA1-202ENST00000394082 TANGO6Q9C0B7 1094 aa21.08■□□□□ 0.97
SNRPA1-202ENST00000394082 MROH8Q9H579 483 aa21.08■□□□□ 0.97
SNRPA1-202ENST00000394082 SOX1O00570 391 aaPredicted RBP21.07■□□□□ 0.96
SNRPA1-202ENST00000394082 CYP2D6P10635 497 aa21.07■□□□□ 0.96
SNRPA1-202ENST00000394082 MAGEA10P43363 369 aaPredicted RBP21.07■□□□□ 0.96
SNRPA1-202ENST00000394082 VCPKMTQ9H867 229 aa21.07■□□□□ 0.96
SNRPA1-202ENST00000394082 SLC5A4Q9NY91 659 aa21.07■□□□□ 0.96
SNRPA1-202ENST00000394082 RCAN3Q9UKA8 241 aa21.07■□□□□ 0.96
SNRPA1-202ENST00000394082 MYH8P13535 1937 aa21.06■□□□□ 0.96
SNRPA1-202ENST00000394082 DNM1LO00429 736 aa21.06■□□□□ 0.96
SNRPA1-202ENST00000394082 WDR46O15213 610 aaKnown RBP21.06■□□□□ 0.96
SNRPA1-202ENST00000394082 PRKAB2O43741 272 aa21.06■□□□□ 0.96
SNRPA1-202ENST00000394082 CYBAP13498 195 aa21.06■□□□□ 0.96
SNRPA1-202ENST00000394082 ADORA2AP29274 412 aa21.06■□□□□ 0.96
SNRPA1-202ENST00000394082 ICA1Q05084 483 aa21.06■□□□□ 0.96
SNRPA1-202ENST00000394082 LRRC26Q2I0M4 334 aa21.06■□□□□ 0.96
SNRPA1-202ENST00000394082 C16orf86Q6ZW13 317 aa21.06■□□□□ 0.96
SNRPA1-202ENST00000394082 DPP9Q86TI2 863 aa21.06■□□□□ 0.96
SNRPA1-202ENST00000394082 TDHQ8IZJ6 230 aa21.06■□□□□ 0.96
SNRPA1-202ENST00000394082 DYNLL2Q96FJ2 89 aa21.06■□□□□ 0.96
SNRPA1-202ENST00000394082 LRRCC1Q9C099 1032 aa21.06■□□□□ 0.96
SNRPA1-202ENST00000394082 ADAMTS5Q9UNA0 930 aa21.06■□□□□ 0.96
SNRPA1-202ENST00000394082 USP17L12C9JPN9 530 aa21.05■□□□□ 0.96
SNRPA1-202ENST00000394082 USP17L21D6R901 530 aa21.05■□□□□ 0.96
SNRPA1-202ENST00000394082 AKR1B1P15121 316 aa21.05■□□□□ 0.96
SNRPA1-202ENST00000394082 SYN1P17600 705 aa21.05■□□□□ 0.96
SNRPA1-202ENST00000394082 ERCC3P19447 782 aa21.05■□□□□ 0.96
SNRPA1-202ENST00000394082 CDK8P49336 464 aa21.05■□□□□ 0.96
SNRPA1-202ENST00000394082 KIAA1755Q5JYT7 1200 aa21.05■□□□□ 0.96
SNRPA1-202ENST00000394082 LRCH3Q96II8 777 aa21.05■□□□□ 0.96
SNRPA1-202ENST00000394082 KANSL2Q9H9L4 492 aa21.05■□□□□ 0.96
SNRPA1-202ENST00000394082 MYH7P12883 1935 aa21.04■□□□□ 0.96
SNRPA1-202ENST00000394082 FLOT1O75955 427 aa21.04■□□□□ 0.96
SNRPA1-202ENST00000394082 CYP2C19P33261 490 aa21.04■□□□□ 0.96
SNRPA1-202ENST00000394082 BAZ2AQ9UIF9 1905 aaKnown RBP21.04■□□□□ 0.96
SNRPA1-202ENST00000394082 SLC25A27O95847 323 aa21.03■□□□□ 0.96
SNRPA1-202ENST00000394082 ARRDC4Q8NCT1 418 aa21.03■□□□□ 0.96
SNRPA1-202ENST00000394082 TRPV1Q8NER1 839 aa21.03■□□□□ 0.96
SNRPA1-202ENST00000394082 PARP14Q460N5 1801 aa21.02■□□□□ 0.96
SNRPA1-202ENST00000394082 SEPT4O43236 478 aa21.02■□□□□ 0.96
SNRPA1-202ENST00000394082 CNGA1P29973 690 aa21.02■□□□□ 0.96
SNRPA1-202ENST00000394082 SLFNL1Q499Z3 407 aa21.02■□□□□ 0.96
SNRPA1-202ENST00000394082 GIMAP6Q6P9H5 292 aa21.02■□□□□ 0.96
SNRPA1-202ENST00000394082 CTR9Q6PD62 1173 aa21.02■□□□□ 0.96
SNRPA1-202ENST00000394082 UBE2OQ9C0C9 1292 aaKnown RBP21.02■□□□□ 0.96
SNRPA1-202ENST00000394082 SENP6Q9GZR1 1112 aaPredicted RBP21.02■□□□□ 0.96
SNRPA1-202ENST00000394082 ARPP21Q9UBL0 812 aaPredicted RBP21.02■□□□□ 0.96
SNRPA1-202ENST00000394082 NRBP1Q9UHY1 535 aa21.02■□□□□ 0.96
SNRPA1-202ENST00000394082 SLC4A4Q9Y6R1 1079 aa21.02■□□□□ 0.96
SNRPA1-202ENST00000394082 COBLO75128 1261 aa21.01■□□□□ 0.95
SNRPA1-202ENST00000394082 SBK1Q52WX2 424 aa21.01■□□□□ 0.95
SNRPA1-202ENST00000394082 SPICE1Q8N0Z3 855 aa21.01■□□□□ 0.95
SNRPA1-202ENST00000394082 ATG4CQ96DT6 458 aa21.01■□□□□ 0.95
SNRPA1-202ENST00000394082 PUS7LQ9H0K6 701 aaKnown RBP21.01■□□□□ 0.95
SNRPA1-202ENST00000394082 ECHDC1Q9NTX5 307 aa21.01■□□□□ 0.95
SNRPA1-202ENST00000394082 LAMA2P24043 3122 aaKnown RBP21.01■□□□□ 0.95
SNRPA1-202ENST00000394082 CYP2D7A0A087X1C5 515 aa21■□□□□ 0.95
SNRPA1-202ENST00000394082 FCER1AP12319 257 aa21■□□□□ 0.95
SNRPA1-202ENST00000394082 EEF2P13639 858 aaKnown RBP21■□□□□ 0.95
SNRPA1-202ENST00000394082 COPB2P35606 906 aa21■□□□□ 0.95
SNRPA1-202ENST00000394082 GOPCQ9HD26 462 aa21■□□□□ 0.95
SNRPA1-202ENST00000394082 DIS3Q9Y2L1 958 aaKnown RBP21■□□□□ 0.95
SNRPA1-202ENST00000394082 PLS1Q14651 629 aa20.99■□□□□ 0.95
SNRPA1-202ENST00000394082 TMEM132BQ14DG7 1078 aa20.99■□□□□ 0.95
SNRPA1-202ENST00000394082 NCAPG2Q86XI2 1143 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms