RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 COA1Q9GZY4 146 aa16.36■□□□□ 0.21
MKS1-203ENST00000393120 MYH6P13533 1939 aa16.36■□□□□ 0.21
MKS1-203ENST00000393120 LRRC37AA6NMS7 1700 aa16.36■□□□□ 0.21
MKS1-203ENST00000393120 LTBP1Q14766 1721 aa16.36■□□□□ 0.21
MKS1-203ENST00000393120 FAM205CA6NFA0 338 aa16.35■□□□□ 0.21
MKS1-203ENST00000393120 NLRP5P59047 1200 aa16.35■□□□□ 0.21
MKS1-203ENST00000393120 DHX8Q14562 1220 aaKnown RBP16.35■□□□□ 0.21
MKS1-203ENST00000393120 SPECC1Q5M775 1068 aa16.35■□□□□ 0.21
MKS1-203ENST00000393120 TTC38Q5R3I4 469 aa16.35■□□□□ 0.21
MKS1-203ENST00000393120 OLFM4Q6UX06 510 aa16.35■□□□□ 0.21
MKS1-203ENST00000393120 TEX11Q8IYF3 940 aa16.35■□□□□ 0.21
MKS1-203ENST00000393120 C17orf53Q8N3J3 647 aaPredicted RBP16.35■□□□□ 0.21
MKS1-203ENST00000393120 SPATA20Q8TB22 786 aa16.35■□□□□ 0.21
MKS1-203ENST00000393120 CCDC34Q96HJ3 373 aa16.35■□□□□ 0.21
MKS1-203ENST00000393120 PRIMPOLQ96LW4 560 aa16.35■□□□□ 0.21
MKS1-203ENST00000393120 OSBPL5Q9H0X9 879 aaPredicted RBP16.35■□□□□ 0.21
MKS1-203ENST00000393120 C6orf229H3BNL8 230 aa16.35■□□□□ 0.21
MKS1-203ENST00000393120 ACTN4O43707 911 aaKnown RBP16.35■□□□□ 0.21
MKS1-203ENST00000393120 ATP2B1P20020 1258 aa16.35■□□□□ 0.21
MKS1-203ENST00000393120 GSDMDP57764 484 aa16.35■□□□□ 0.21
MKS1-203ENST00000393120 ATP2C1P98194 919 aaPredicted RBP16.35■□□□□ 0.21
MKS1-203ENST00000393120 MYL5Q02045 173 aa16.35■□□□□ 0.21
MKS1-203ENST00000393120 NEDD1Q8NHV4 660 aa16.35■□□□□ 0.21
MKS1-203ENST00000393120 SERTAD1Q9UHV2 236 aa16.35■□□□□ 0.21
MKS1-203ENST00000393120 MAD2L2Q9UI95 211 aa16.35■□□□□ 0.21
MKS1-203ENST00000393120 FLT1P17948 1338 aa16.34■□□□□ 0.21
MKS1-203ENST00000393120 USP17L3A6NCW0 530 aa16.34■□□□□ 0.21
MKS1-203ENST00000393120 USP17L4A6NCW7 530 aa16.34■□□□□ 0.21
MKS1-203ENST00000393120 PALM3A6NDB9 673 aaPredicted RBP16.34■□□□□ 0.21
MKS1-203ENST00000393120 NPR1P16066 1061 aa16.34■□□□□ 0.21
MKS1-203ENST00000393120 NOVP48745 357 aa16.34■□□□□ 0.21
MKS1-203ENST00000393120 CDK8P49336 464 aa16.34■□□□□ 0.21
MKS1-203ENST00000393120 LRMPQ12912 555 aa16.34■□□□□ 0.21
MKS1-203ENST00000393120 DNTTIP2Q5QJE6 756 aaKnown RBP16.34■□□□□ 0.21
MKS1-203ENST00000393120 GALNT17Q6IS24 598 aa16.34■□□□□ 0.21
MKS1-203ENST00000393120 USP17L1Q7RTZ2 530 aa16.34■□□□□ 0.21
MKS1-203ENST00000393120 AKT1S1Q96B36 256 aa16.34■□□□□ 0.21
MKS1-203ENST00000393120 TMEM47Q9BQJ4 181 aa16.34■□□□□ 0.21
MKS1-203ENST00000393120 HSD3B7Q9H2F3 369 aa16.34■□□□□ 0.21
MKS1-203ENST00000393120 SRGNP10124 158 aa16.33■□□□□ 0.21
MKS1-203ENST00000393120 CT47A1Q5JQC4 288 aaPredicted RBP16.33■□□□□ 0.21
MKS1-203ENST00000393120 MLKLQ8NB16 471 aa16.33■□□□□ 0.21
MKS1-203ENST00000393120 FLAD1Q8NFF5 587 aa16.33■□□□□ 0.21
MKS1-203ENST00000393120 SLFN14P0C7P3 912 aa16.33■□□□□ 0.2
MKS1-203ENST00000393120 BMP6P22004 513 aa16.33■□□□□ 0.2
MKS1-203ENST00000393120 SMARCA1P28370 1054 aa16.33■□□□□ 0.2
MKS1-203ENST00000393120 MORC3Q14149 939 aa16.33■□□□□ 0.2
MKS1-203ENST00000393120 SLC4A8Q2Y0W8 1093 aa16.33■□□□□ 0.2
MKS1-203ENST00000393120 BLIDQ8IZY5 108 aa16.33■□□□□ 0.2
MKS1-203ENST00000393120 STAG2Q8N3U4 1231 aa16.33■□□□□ 0.2
MKS1-203ENST00000393120 DAGLBQ8NCG7 672 aa16.33■□□□□ 0.2
MKS1-203ENST00000393120 SLC44A5Q8NCS7 719 aa16.33■□□□□ 0.2
MKS1-203ENST00000393120 NAV1Q8NEY1 1877 aa16.33■□□□□ 0.2
MKS1-203ENST00000393120 SAP30BPQ9UHR5 308 aaKnown RBP16.33■□□□□ 0.2
MKS1-203ENST00000393120 DACH1Q9UI36 760 aa16.33■□□□□ 0.2
MKS1-203ENST00000393120 MAN1B1Q9UKM7 699 aa16.33■□□□□ 0.2
MKS1-203ENST00000393120 BRWD3Q6RI45 1802 aa16.33■□□□□ 0.2
MKS1-203ENST00000393120 FOXN1O15353 648 aa16.32■□□□□ 0.2
MKS1-203ENST00000393120 VEGFAP15692 232 aaPredicted RBP16.32■□□□□ 0.2
MKS1-203ENST00000393120 ALDH1B1P30837 517 aa16.32■□□□□ 0.2
MKS1-203ENST00000393120 ZNF174Q15697 407 aa16.32■□□□□ 0.2
MKS1-203ENST00000393120 ISM2Q6H9L7 571 aa16.32■□□□□ 0.2
MKS1-203ENST00000393120 USP49Q70CQ1 688 aa16.32■□□□□ 0.2
MKS1-203ENST00000393120 SH3RF1Q7Z6J0 888 aa16.32■□□□□ 0.2
MKS1-203ENST00000393120 SMARCE1Q969G3 411 aa16.32■□□□□ 0.2
MKS1-203ENST00000393120 EYA3Q99504 573 aa16.32■□□□□ 0.2
MKS1-203ENST00000393120 PYM1Q9BRP8 204 aaKnown RBP16.32■□□□□ 0.2
MKS1-203ENST00000393120 XPO4Q9C0E2 1151 aaKnown RBP16.32■□□□□ 0.2
MKS1-203ENST00000393120 IFNKQ9P0W0 207 aa16.32■□□□□ 0.2
MKS1-203ENST00000393120 PCDHA4Q9UN74 947 aa16.32■□□□□ 0.2
MKS1-203ENST00000393120 DDX60LQ5H9U9 1706 aaKnown RBP16.32■□□□□ 0.2
MKS1-203ENST00000393120 M0R2N6 131 aa16.31■□□□□ 0.2
MKS1-203ENST00000393120 WNT7AO00755 349 aa16.31■□□□□ 0.2
MKS1-203ENST00000393120 FANCCQ00597 558 aa16.31■□□□□ 0.2
MKS1-203ENST00000393120 PTGDRQ13258 359 aa16.31■□□□□ 0.2
MKS1-203ENST00000393120 ARL6IP4Q66PJ3 421 aaKnown RBP16.31■□□□□ 0.2
MKS1-203ENST00000393120 CCDC148Q8NFR7 591 aa16.31■□□□□ 0.2
MKS1-203ENST00000393120 SPZ1Q9BXG8 430 aa16.31■□□□□ 0.2
MKS1-203ENST00000393120 ANO8Q9HCE9 1232 aaPredicted RBP16.31■□□□□ 0.2
MKS1-203ENST00000393120 KCND1Q9NSA2 647 aa16.31■□□□□ 0.2
MKS1-203ENST00000393120 DAGLAQ9Y4D2 1042 aa16.31■□□□□ 0.2
MKS1-203ENST00000393120 NRXN2Q9P2S2 1712 aa16.31■□□□□ 0.2
MKS1-203ENST00000393120 SMC2O95347 1197 aa16.31■□□□□ 0.2
MKS1-203ENST00000393120 PDE6BP35913 854 aa16.31■□□□□ 0.2
MKS1-203ENST00000393120 GTF2IP78347 998 aa16.31■□□□□ 0.2
MKS1-203ENST00000393120 ZNF827Q17R98 1081 aa16.31■□□□□ 0.2
MKS1-203ENST00000393120 NOM1Q5C9Z4 860 aaKnown RBP16.31■□□□□ 0.2
MKS1-203ENST00000393120 PIK3AP1Q6ZUJ8 805 aa16.31■□□□□ 0.2
MKS1-203ENST00000393120 COL23A1Q86Y22 540 aaPredicted RBP16.31■□□□□ 0.2
MKS1-203ENST00000393120 SNED1Q8TER0 1413 aa16.3■□□□□ 0.2
MKS1-203ENST00000393120 CBFA2T2O43439 604 aa16.3■□□□□ 0.2
MKS1-203ENST00000393120 TOP1P11387 765 aaKnown RBP16.3■□□□□ 0.2
MKS1-203ENST00000393120 LMOD1P29536 600 aaPredicted RBP16.3■□□□□ 0.2
MKS1-203ENST00000393120 SLC35G1Q2M3R5 365 aa16.3■□□□□ 0.2
MKS1-203ENST00000393120 SYMPKQ92797 1274 aaKnown RBP16.3■□□□□ 0.2
MKS1-203ENST00000393120 EPSTI1Q96J88 318 aa16.3■□□□□ 0.2
MKS1-203ENST00000393120 ZC3H12CQ9C0D7 883 aaKnown RBP16.3■□□□□ 0.2
MKS1-203ENST00000393120 BARHL2Q9NY43 387 aa16.3■□□□□ 0.2
MKS1-203ENST00000393120 STX8Q9UNK0 236 aa16.3■□□□□ 0.2
MKS1-203ENST00000393120 CYTH3O43739 400 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms