RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 INTS13Q9NVM9 706 aa17.06■□□□□ 0.32
SHTN1-204ENST00000392903 USP21Q9UK80 565 aa17.06■□□□□ 0.32
SHTN1-204ENST00000392903 RAB21Q9UL25 225 aa17.06■□□□□ 0.32
SHTN1-204ENST00000392903 RTCBQ9Y3I0 505 aaKnown RBP17.06■□□□□ 0.32
SHTN1-204ENST00000392903 MYH2Q9UKX2 1941 aa17.06■□□□□ 0.32
SHTN1-204ENST00000392903 EIF3JO75822 258 aaKnown RBP17.06■□□□□ 0.32
SHTN1-204ENST00000392903 MECOMQ03112 1051 aa17.06■□□□□ 0.32
SHTN1-204ENST00000392903 PTPAQ15257 358 aa17.06■□□□□ 0.32
SHTN1-204ENST00000392903 TOGARAM2Q6ZUX3 1019 aa17.06■□□□□ 0.32
SHTN1-204ENST00000392903 SRGAP1Q7Z6B7 1085 aa17.06■□□□□ 0.32
SHTN1-204ENST00000392903 FBXO33Q7Z6M2 555 aa17.06■□□□□ 0.32
SHTN1-204ENST00000392903 ESR2Q92731 530 aa17.06■□□□□ 0.32
SHTN1-204ENST00000392903 AATFQ9NY61 560 aaKnown RBP eCLIP17.06■□□□□ 0.32
SHTN1-204ENST00000392903 ECM29Q5VYK3 1845 aa17.05■□□□□ 0.32
SHTN1-204ENST00000392903 hCG_1642624A0A1W2PR95 340 aa17.05■□□□□ 0.32
SHTN1-204ENST00000392903 HIBADHP31937 336 aaKnown RBP17.05■□□□□ 0.32
SHTN1-204ENST00000392903 CHMP4BP1P59074 171 aa17.05■□□□□ 0.32
SHTN1-204ENST00000392903 SLC4A8Q2Y0W8 1093 aa17.05■□□□□ 0.32
SHTN1-204ENST00000392903 SPECC1Q5M775 1068 aa17.05■□□□□ 0.32
SHTN1-204ENST00000392903 SHC4Q6S5L8 630 aa17.05■□□□□ 0.32
SHTN1-204ENST00000392903 CRACR2BQ8N4Y2 399 aaPredicted RBP17.05■□□□□ 0.32
SHTN1-204ENST00000392903 MKRN1Q9UHC7 482 aaKnown RBP17.05■□□□□ 0.32
SHTN1-204ENST00000392903 USP17L12C9JPN9 530 aa17.05■□□□□ 0.32
SHTN1-204ENST00000392903 USP17L21D6R901 530 aa17.05■□□□□ 0.32
SHTN1-204ENST00000392903 PRDX5P30044 214 aa17.05■□□□□ 0.32
SHTN1-204ENST00000392903 TUBB4BP68371 445 aa17.05■□□□□ 0.32
SHTN1-204ENST00000392903 DIS3L2Q8IYB7 885 aaKnown RBP17.05■□□□□ 0.32
SHTN1-204ENST00000392903 TMTC2Q8N394 836 aa17.05■□□□□ 0.32
SHTN1-204ENST00000392903 TC2NQ8N9U0 490 aa17.05■□□□□ 0.32
SHTN1-204ENST00000392903 MSANTD4Q8NCY6 345 aa17.05■□□□□ 0.32
SHTN1-204ENST00000392903 RGS22Q8NE09 1264 aa17.05■□□□□ 0.32
SHTN1-204ENST00000392903 ZFP91Q96JP5 570 aaPredicted RBP17.05■□□□□ 0.32
SHTN1-204ENST00000392903 ANKZF1Q9H8Y5 726 aa17.05■□□□□ 0.32
SHTN1-204ENST00000392903 CACNA1SQ13698 1873 aa17.04■□□□□ 0.32
SHTN1-204ENST00000392903 CUTAO60888 179 aa17.04■□□□□ 0.32
SHTN1-204ENST00000392903 MMP1P03956 469 aa17.04■□□□□ 0.32
SHTN1-204ENST00000392903 ATP2B1P20020 1258 aa17.04■□□□□ 0.32
SHTN1-204ENST00000392903 SYKP43405 635 aa17.04■□□□□ 0.32
SHTN1-204ENST00000392903 NR5A1Q13285 461 aa17.04■□□□□ 0.32
SHTN1-204ENST00000392903 TTC31Q49AM3 519 aaPredicted RBP17.04■□□□□ 0.32
SHTN1-204ENST00000392903 RC3H1Q5TC82 1133 aaKnown RBP17.04■□□□□ 0.32
SHTN1-204ENST00000392903 NOSTRINQ8IVI9 506 aa17.04■□□□□ 0.32
SHTN1-204ENST00000392903 ENAHQ8N8S7 591 aaPredicted RBP17.04■□□□□ 0.32
SHTN1-204ENST00000392903 CCDC12Q8WUD4 166 aaPredicted RBP17.04■□□□□ 0.32
SHTN1-204ENST00000392903 NSUN4Q96CB9 384 aaKnown RBP17.04■□□□□ 0.32
SHTN1-204ENST00000392903 FANCLQ9NW38 375 aa17.04■□□□□ 0.32
SHTN1-204ENST00000392903 L1RE1Q9UN81 338 aa17.04■□□□□ 0.32
SHTN1-204ENST00000392903 TIAM2Q8IVF5 1701 aa17.04■□□□□ 0.32
SHTN1-204ENST00000392903 ERLIN1O75477 346 aa17.04■□□□□ 0.32
SHTN1-204ENST00000392903 SEC23AQ15436 765 aa17.04■□□□□ 0.32
SHTN1-204ENST00000392903 WASF1Q92558 559 aa17.04■□□□□ 0.32
SHTN1-204ENST00000392903 STK36Q9NRP7 1315 aa17.03■□□□□ 0.32
SHTN1-204ENST00000392903 A0A1B0GUL6 1792 aa17.03■□□□□ 0.32
SHTN1-204ENST00000392903 MCM6Q14566 821 aa17.03■□□□□ 0.32
SHTN1-204ENST00000392903 SAFBQ15424 915 aaKnown RBP eCLIP17.03■□□□□ 0.32
SHTN1-204ENST00000392903 ZSCAN10Q96SZ4 725 aaPredicted RBP17.03■□□□□ 0.32
SHTN1-204ENST00000392903 ANAPC4Q9UJX5 808 aa17.03■□□□□ 0.32
SHTN1-204ENST00000392903 HPSEQ9Y251 543 aa17.03■□□□□ 0.32
SHTN1-204ENST00000392903 JRKLQ9Y4A0 524 aa17.03■□□□□ 0.32
SHTN1-204ENST00000392903 BAZ2BQ9UIF8 2168 aaKnown RBP17.03■□□□□ 0.32
SHTN1-204ENST00000392903 CCDC196A0A1B0GTZ2 297 aa17.02■□□□□ 0.32
SHTN1-204ENST00000392903 EIF3CLB5ME19 914 aaKnown RBP17.02■□□□□ 0.32
SHTN1-204ENST00000392903 PPP6R2O75170 966 aa17.02■□□□□ 0.32
SHTN1-204ENST00000392903 GUCY2CP25092 1073 aa17.02■□□□□ 0.32
SHTN1-204ENST00000392903 TOB1P50616 345 aaPredicted RBP17.02■□□□□ 0.32
SHTN1-204ENST00000392903 OLFM4Q6UX06 510 aa17.02■□□□□ 0.32
SHTN1-204ENST00000392903 PACS2Q86VP3 889 aa17.02■□□□□ 0.32
SHTN1-204ENST00000392903 CEP112Q8N8E3 955 aa17.02■□□□□ 0.32
SHTN1-204ENST00000392903 JMYQ8N9B5 988 aa17.02■□□□□ 0.32
SHTN1-204ENST00000392903 OXER1Q8TDS5 423 aa17.02■□□□□ 0.32
SHTN1-204ENST00000392903 EIF3CQ99613 913 aaKnown RBP17.02■□□□□ 0.32
SHTN1-204ENST00000392903 NMT2O60551 498 aa17.02■□□□□ 0.32
SHTN1-204ENST00000392903 DEXIO95424 95 aa17.02■□□□□ 0.32
SHTN1-204ENST00000392903 TM4SF1P30408 202 aa17.02■□□□□ 0.32
SHTN1-204ENST00000392903 RFC4P35249 363 aa17.02■□□□□ 0.32
SHTN1-204ENST00000392903 SPECC1LQ69YQ0 1117 aa17.02■□□□□ 0.32
SHTN1-204ENST00000392903 FNBP4Q8N3X1 1017 aaPredicted RBP17.02■□□□□ 0.32
SHTN1-204ENST00000392903 MYH13Q9UKX3 1938 aa17.02■□□□□ 0.31
SHTN1-204ENST00000392903 BTAF1O14981 1849 aa17.01■□□□□ 0.31
SHTN1-204ENST00000392903 FAM237AA0A1B0GTK4 181 aa17.01■□□□□ 0.31
SHTN1-204ENST00000392903 CORO7P57737 925 aa17.01■□□□□ 0.31
SHTN1-204ENST00000392903 TUBB2AQ13885 445 aa17.01■□□□□ 0.31
SHTN1-204ENST00000392903 IFIT1BQ5T764 474 aaKnown RBP17.01■□□□□ 0.31
SHTN1-204ENST00000392903 PPM1EQ8WY54 764 aa17.01■□□□□ 0.31
SHTN1-204ENST00000392903 TUBB2BQ9BVA1 445 aa17.01■□□□□ 0.31
SHTN1-204ENST00000392903 BRIP1Q9BX63 1249 aa17.01■□□□□ 0.31
SHTN1-204ENST00000392903 FAN1Q9Y2M0 1017 aa17.01■□□□□ 0.31
SHTN1-204ENST00000392903 GRIN1Q05586 938 aa17.01■□□□□ 0.31
SHTN1-204ENST00000392903 PTPN21Q16825 1174 aa17.01■□□□□ 0.31
SHTN1-204ENST00000392903 FOXR1Q6PIV2 292 aa17.01■□□□□ 0.31
SHTN1-204ENST00000392903 PDILTQ8N807 584 aa17.01■□□□□ 0.31
SHTN1-204ENST00000392903 ANKRD2Q9GZV1 360 aa17.01■□□□□ 0.31
SHTN1-204ENST00000392903 ANKIB1Q9P2G1 1089 aa17.01■□□□□ 0.31
SHTN1-204ENST00000392903 CDC23Q9UJX2 597 aa17.01■□□□□ 0.31
SHTN1-204ENST00000392903 CYP2D6P10635 497 aa17■□□□□ 0.31
SHTN1-204ENST00000392903 PNOCQ13519 176 aa17■□□□□ 0.31
SHTN1-204ENST00000392903 FAM47AQ5JRC9 791 aa17■□□□□ 0.31
SHTN1-204ENST00000392903 FAM71BQ8TC56 605 aa17■□□□□ 0.31
SHTN1-204ENST00000392903 ZBTB9Q96C00 473 aa17■□□□□ 0.31
SHTN1-204ENST00000392903 PNKPQ96T60 521 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms