RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 EIF6P56537 245 aaKnown RBP20.34■□□□□ 0.85
SHTN1-203ENST00000392901 PRMT6Q96LA8 375 aaPredicted RBP20.34■□□□□ 0.85
SHTN1-203ENST00000392901 CABP5Q9NP86 173 aa20.34■□□□□ 0.85
SHTN1-203ENST00000392901 ZNF646O15015 1829 aaPredicted RBP20.34■□□□□ 0.85
SHTN1-203ENST00000392901 A0A1B0GVL5 298 aa20.34■□□□□ 0.85
SHTN1-203ENST00000392901 DDTLA6NHG4 134 aaPredicted RBP20.34■□□□□ 0.85
SHTN1-203ENST00000392901 ATP2B1P20020 1258 aa20.34■□□□□ 0.85
SHTN1-203ENST00000392901 SHMT1P34896 483 aa20.34■□□□□ 0.85
SHTN1-203ENST00000392901 KRT2P35908 639 aa20.34■□□□□ 0.85
SHTN1-203ENST00000392901 PFKFB3Q16875 520 aaPredicted RBP20.34■□□□□ 0.85
SHTN1-203ENST00000392901 RSBN1LQ6PCB5 846 aaPredicted RBP20.34■□□□□ 0.85
SHTN1-203ENST00000392901 MRPS27Q92552 414 aaKnown RBP20.34■□□□□ 0.85
SHTN1-203ENST00000392901 IDI2Q9BXS1 227 aa20.34■□□□□ 0.85
SHTN1-203ENST00000392901 CCDC192P0DO97 292 aa20.33■□□□□ 0.85
SHTN1-203ENST00000392901 TOB1P50616 345 aaPredicted RBP20.33■□□□□ 0.85
SHTN1-203ENST00000392901 SNW1Q13573 536 aaKnown RBP20.33■□□□□ 0.85
SHTN1-203ENST00000392901 PTPAQ15257 358 aa20.33■□□□□ 0.85
SHTN1-203ENST00000392901 RBM43Q6ZSC3 357 aaKnown RBP20.33■□□□□ 0.85
SHTN1-203ENST00000392901 CLEC10AQ8IUN9 316 aa20.33■□□□□ 0.85
SHTN1-203ENST00000392901 MTMR4Q9NYA4 1195 aa20.33■□□□□ 0.85
SHTN1-203ENST00000392901 ZBTB12Q9Y330 459 aaPredicted RBP20.33■□□□□ 0.85
SHTN1-203ENST00000392901 PALM3A6NDB9 673 aaPredicted RBP20.32■□□□□ 0.84
SHTN1-203ENST00000392901 FAM196BA6NMK8 535 aa20.32■□□□□ 0.84
SHTN1-203ENST00000392901 MPHOSPH10O00566 681 aaKnown RBP20.32■□□□□ 0.84
SHTN1-203ENST00000392901 FAM160A1Q05DH4 1040 aa20.32■□□□□ 0.84
SHTN1-203ENST00000392901 DALRD3Q5D0E6 543 aaKnown RBP20.32■□□□□ 0.84
SHTN1-203ENST00000392901 SOGA3Q5TF21 947 aa20.32■□□□□ 0.84
SHTN1-203ENST00000392901 USP17L2Q6R6M4 530 aa20.32■□□□□ 0.84
SHTN1-203ENST00000392901 DHX36Q9H2U1 1008 aaKnown RBP20.32■□□□□ 0.84
SHTN1-203ENST00000392901 CPVLQ9H3G5 476 aa20.32■□□□□ 0.84
SHTN1-203ENST00000392901 A0A1W2PQ27 194 aa20.32■□□□□ 0.84
SHTN1-203ENST00000392901 A0A1W2PQ64 194 aa20.32■□□□□ 0.84
SHTN1-203ENST00000392901 A0A1W2PQD8 194 aa20.32■□□□□ 0.84
SHTN1-203ENST00000392901 KLRF2D3W0D1 207 aa20.32■□□□□ 0.84
SHTN1-203ENST00000392901 NLRP5P59047 1200 aa20.32■□□□□ 0.84
SHTN1-203ENST00000392901 RILPL1Q5EBL4 403 aa20.32■□□□□ 0.84
SHTN1-203ENST00000392901 ENGASEQ8NFI3 743 aa20.32■□□□□ 0.84
SHTN1-203ENST00000392901 BRMS1Q9HCU9 246 aa20.32■□□□□ 0.84
SHTN1-203ENST00000392901 CYTH3O43739 400 aa20.31■□□□□ 0.84
SHTN1-203ENST00000392901 VIL1P09327 827 aaKnown RBP20.31■□□□□ 0.84
SHTN1-203ENST00000392901 PARP1P09874 1014 aaKnown RBP20.31■□□□□ 0.84
SHTN1-203ENST00000392901 TYRO3Q06418 890 aa20.31■□□□□ 0.84
SHTN1-203ENST00000392901 SLC35G1Q2M3R5 365 aa20.31■□□□□ 0.84
SHTN1-203ENST00000392901 UVSSAQ2YD98 709 aa20.31■□□□□ 0.84
SHTN1-203ENST00000392901 AXDND1Q5T1B0 1012 aaPredicted RBP20.31■□□□□ 0.84
SHTN1-203ENST00000392901 SH3BP5LQ7L8J4 393 aa20.31■□□□□ 0.84
SHTN1-203ENST00000392901 LRRC47Q8N1G4 583 aaKnown RBP20.31■□□□□ 0.84
SHTN1-203ENST00000392901 GPKOWQ92917 476 aaPredicted RBP eCLIP20.31■□□□□ 0.84
SHTN1-203ENST00000392901 PI4KBQ9UBF8 816 aa20.31■□□□□ 0.84
SHTN1-203ENST00000392901 CLIP2Q9UDT6 1046 aa20.31■□□□□ 0.84
SHTN1-203ENST00000392901 MRVI1Q9Y6F6 885 aa20.31■□□□□ 0.84
SHTN1-203ENST00000392901 COL4A5P29400 1685 aa20.31■□□□□ 0.84
SHTN1-203ENST00000392901 KIF13BQ9NQT8 1826 aa20.31■□□□□ 0.84
SHTN1-203ENST00000392901 MYO3BQ8WXR4 1341 aa20.31■□□□□ 0.84
SHTN1-203ENST00000392901 FAM205CA6NFA0 338 aa20.31■□□□□ 0.84
SHTN1-203ENST00000392901 KINO60870 393 aaKnown RBP20.31■□□□□ 0.84
SHTN1-203ENST00000392901 NOVP48745 357 aa20.31■□□□□ 0.84
SHTN1-203ENST00000392901 NDUFA8P51970 172 aa20.31■□□□□ 0.84
SHTN1-203ENST00000392901 EARS2Q5JPH6 523 aaKnown RBP20.31■□□□□ 0.84
SHTN1-203ENST00000392901 NIM1KQ8IY84 436 aa20.31■□□□□ 0.84
SHTN1-203ENST00000392901 JMYQ8N9B5 988 aa20.31■□□□□ 0.84
SHTN1-203ENST00000392901 EHD4Q9H223 541 aa20.31■□□□□ 0.84
SHTN1-203ENST00000392901 DNAJC18Q9H819 358 aa20.31■□□□□ 0.84
SHTN1-203ENST00000392901 PLIN4Q96Q06 1357 aa20.3■□□□□ 0.84
SHTN1-203ENST00000392901 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.3■□□□□ 0.84
SHTN1-203ENST00000392901 PPP6R2O75170 966 aa20.3■□□□□ 0.84
SHTN1-203ENST00000392901 ZNRF3Q9ULT6 936 aa20.3■□□□□ 0.84
SHTN1-203ENST00000392901 PCDHB6Q9Y5E3 794 aa20.3■□□□□ 0.84
SHTN1-203ENST00000392901 USP17L5A8MUK1 530 aa20.29■□□□□ 0.84
SHTN1-203ENST00000392901 NPY5RQ15761 445 aa20.29■□□□□ 0.84
SHTN1-203ENST00000392901 OGFOD1Q8N543 542 aa20.29■□□□□ 0.84
SHTN1-203ENST00000392901 TRIM34Q9BYJ4 488 aa20.29■□□□□ 0.84
SHTN1-203ENST00000392901 IGKV6D-41A0A0C4DH26 115 aa20.29■□□□□ 0.84
SHTN1-203ENST00000392901 ATP2B2Q01814 1243 aa20.29■□□□□ 0.84
SHTN1-203ENST00000392901 FMR1NBQ8N0W7 255 aaPredicted RBP20.29■□□□□ 0.84
SHTN1-203ENST00000392901 CLIC6Q96NY7 704 aa20.29■□□□□ 0.84
SHTN1-203ENST00000392901 VPS33BQ9H267 617 aa20.29■□□□□ 0.84
SHTN1-203ENST00000392901 MYH8P13535 1937 aa20.28■□□□□ 0.84
SHTN1-203ENST00000392901 TTLL1O95922 423 aa20.28■□□□□ 0.84
SHTN1-203ENST00000392901 NOM1Q5C9Z4 860 aaKnown RBP20.28■□□□□ 0.84
SHTN1-203ENST00000392901 LZTS2Q9BRK4 669 aa20.28■□□□□ 0.84
SHTN1-203ENST00000392901 VAT1LQ9HCJ6 419 aa20.28■□□□□ 0.84
SHTN1-203ENST00000392901 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.28■□□□□ 0.84
SHTN1-203ENST00000392901 USP25Q9UHP3 1055 aa20.28■□□□□ 0.84
SHTN1-203ENST00000392901 HDAC9Q9UKV0 1011 aa20.28■□□□□ 0.84
SHTN1-203ENST00000392901 CLRN2A0PK11 232 aa20.28■□□□□ 0.84
SHTN1-203ENST00000392901 PSDA5PKW4 1024 aaPredicted RBP20.28■□□□□ 0.84
SHTN1-203ENST00000392901 CMA1P23946 247 aa20.28■□□□□ 0.84
SHTN1-203ENST00000392901 GMLQ99445 158 aa20.28■□□□□ 0.84
SHTN1-203ENST00000392901 TAOK3Q9H2K8 898 aa20.28■□□□□ 0.84
SHTN1-203ENST00000392901 FRMPD2Q68DX3 1309 aaPredicted RBP20.27■□□□□ 0.84
SHTN1-203ENST00000392901 SPDYE2BA6NHP3 402 aa20.27■□□□□ 0.84
SHTN1-203ENST00000392901 NPM3O75607 178 aaKnown RBP20.27■□□□□ 0.84
SHTN1-203ENST00000392901 SPDYE6P0CI01 402 aa20.27■□□□□ 0.84
SHTN1-203ENST00000392901 PDHBP11177 359 aa20.27■□□□□ 0.84
SHTN1-203ENST00000392901 DLGAP5Q15398 846 aa20.27■□□□□ 0.84
SHTN1-203ENST00000392901 CERKLQ49MI3 558 aaPredicted RBP20.27■□□□□ 0.84
SHTN1-203ENST00000392901 HEATR3Q7Z4Q2 680 aa20.27■□□□□ 0.84
SHTN1-203ENST00000392901 HOMER1Q86YM7 354 aa20.27■□□□□ 0.84
SHTN1-203ENST00000392901 CCDC17Q96LX7 622 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms