RNA–Protein interactions for RNA: ENST00000392090.6

PDCD2-202, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-202ENST00000392090 ZNF444Q8N0Y2 327 aaPredicted RBP23.35■■□□□ 1.33
PDCD2-202ENST00000392090 LPAR1Q92633 364 aa23.35■■□□□ 1.33
PDCD2-202ENST00000392090 CWC22Q9HCG8 908 aaKnown RBP23.35■■□□□ 1.33
PDCD2-202ENST00000392090 HELLSQ9NRZ9 838 aa23.35■■□□□ 1.33
PDCD2-202ENST00000392090 RABGAP1Q9Y3P9 1069 aa23.35■■□□□ 1.33
PDCD2-202ENST00000392090 TNRC18O15417 2968 aaPredicted RBP23.34■■□□□ 1.33
PDCD2-202ENST00000392090 ELNP15502 786 aa23.34■■□□□ 1.33
PDCD2-202ENST00000392090 EN2P19622 333 aaPredicted RBP23.34■■□□□ 1.33
PDCD2-202ENST00000392090 MAPK4P31152 587 aa23.34■■□□□ 1.33
PDCD2-202ENST00000392090 SPICE1Q8N0Z3 855 aa23.34■■□□□ 1.33
PDCD2-202ENST00000392090 PDE4DIPQ5VU43 2346 aa23.34■■□□□ 1.33
PDCD2-202ENST00000392090 RBBP6Q7Z6E9 1792 aaKnown RBP23.33■■□□□ 1.33
PDCD2-202ENST00000392090 RAD21O60216 631 aa23.33■■□□□ 1.33
PDCD2-202ENST00000392090 PRDM1O75626 825 aa23.33■■□□□ 1.33
PDCD2-202ENST00000392090 CCNA1P78396 465 aa23.33■■□□□ 1.33
PDCD2-202ENST00000392090 PDE4BQ07343 736 aa23.33■■□□□ 1.33
PDCD2-202ENST00000392090 COG2Q14746 738 aa23.33■■□□□ 1.33
PDCD2-202ENST00000392090 MTFR1Q15390 333 aa23.33■■□□□ 1.33
PDCD2-202ENST00000392090 Q3C1V9 767 aa23.33■■□□□ 1.33
PDCD2-202ENST00000392090 PXYLP1Q8TE99 480 aa23.33■■□□□ 1.33
PDCD2-202ENST00000392090 FAM227BQ96M60 508 aa23.33■■□□□ 1.33
PDCD2-202ENST00000392090 OSBPL3Q9H4L5 887 aa23.33■■□□□ 1.33
PDCD2-202ENST00000392090 VCPKMTQ9H867 229 aa23.33■■□□□ 1.33
PDCD2-202ENST00000392090 GOPCQ9HD26 462 aa23.33■■□□□ 1.33
PDCD2-202ENST00000392090 HOXC10Q9NYD6 342 aa23.33■■□□□ 1.33
PDCD2-202ENST00000392090 PPARAQ07869 468 aa23.32■■□□□ 1.32
PDCD2-202ENST00000392090 MCMDC2Q4G0Z9 681 aa23.32■■□□□ 1.32
PDCD2-202ENST00000392090 KIAA1755Q5JYT7 1200 aa23.32■■□□□ 1.32
PDCD2-202ENST00000392090 POTEEQ6S8J3 1075 aa23.32■■□□□ 1.32
PDCD2-202ENST00000392090 MKI67P46013 3256 aaKnown RBP23.32■■□□□ 1.32
PDCD2-202ENST00000392090 SPDYE16A6NNV3 312 aaPredicted RBP23.31■■□□□ 1.32
PDCD2-202ENST00000392090 CCL5P13501 91 aa23.31■■□□□ 1.32
PDCD2-202ENST00000392090 LBX2Q6XYB7 198 aa23.31■■□□□ 1.32
PDCD2-202ENST00000392090 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.31■■□□□ 1.32
PDCD2-202ENST00000392090 PORCNQ9H237 461 aa23.31■■□□□ 1.32
PDCD2-202ENST00000392090 GJD2Q9UKL4 321 aa23.31■■□□□ 1.32
PDCD2-202ENST00000392090 A0A0D9SFI3 127 aa23.3■■□□□ 1.32
PDCD2-202ENST00000392090 WDR46O15213 610 aaKnown RBP23.3■■□□□ 1.32
PDCD2-202ENST00000392090 FLOT1O75955 427 aa23.3■■□□□ 1.32
PDCD2-202ENST00000392090 INHAP05111 366 aa23.3■■□□□ 1.32
PDCD2-202ENST00000392090 NMIQ13287 307 aaPredicted RBP23.3■■□□□ 1.32
PDCD2-202ENST00000392090 VPS53Q5VIR6 699 aa23.3■■□□□ 1.32
PDCD2-202ENST00000392090 WDR78Q5VTH9 848 aa23.3■■□□□ 1.32
PDCD2-202ENST00000392090 SAMD1Q6SPF0 538 aaPredicted RBP23.3■■□□□ 1.32
PDCD2-202ENST00000392090 SOCS4Q8WXH5 440 aa23.3■■□□□ 1.32
PDCD2-202ENST00000392090 NUDT12Q9BQG2 462 aa23.3■■□□□ 1.32
PDCD2-202ENST00000392090 RNF208Q9H0X6 261 aa23.3■■□□□ 1.32
PDCD2-202ENST00000392090 CNMDO75829 334 aa23.29■■□□□ 1.32
PDCD2-202ENST00000392090 PLEKHH3Q7Z736 793 aa23.29■■□□□ 1.32
PDCD2-202ENST00000392090 BTBD7Q9P203 1132 aa23.29■■□□□ 1.32
PDCD2-202ENST00000392090 FOXP2O15409 715 aa23.28■■□□□ 1.32
PDCD2-202ENST00000392090 TSPY3P0CV98 308 aa23.28■■□□□ 1.32
PDCD2-202ENST00000392090 TSPY8P0CW00 308 aa23.28■■□□□ 1.32
PDCD2-202ENST00000392090 SDSP20132 328 aa23.28■■□□□ 1.32
PDCD2-202ENST00000392090 CYP2B6P20813 491 aa23.28■■□□□ 1.32
PDCD2-202ENST00000392090 GPR142Q7Z601 462 aa23.28■■□□□ 1.32
PDCD2-202ENST00000392090 NYAP2Q9P242 653 aa23.28■■□□□ 1.32
PDCD2-202ENST00000392090 MB21D1Q8N884 522 aa23.27■■□□□ 1.32
PDCD2-202ENST00000392090 NKX2-3Q8TAU0 364 aa23.27■■□□□ 1.32
PDCD2-202ENST00000392090 UNC93B1Q9H1C4 597 aa23.27■■□□□ 1.32
PDCD2-202ENST00000392090 CLIP2Q9UDT6 1046 aa23.27■■□□□ 1.32
PDCD2-202ENST00000392090 GREB1LQ9C091 1923 aaPredicted RBP23.27■■□□□ 1.32
PDCD2-202ENST00000392090 GJB1P08034 283 aa23.26■■□□□ 1.31
PDCD2-202ENST00000392090 DSG3P32926 999 aa23.26■■□□□ 1.31
PDCD2-202ENST00000392090 MFAP1P55081 439 aaKnown RBP23.26■■□□□ 1.31
PDCD2-202ENST00000392090 TFAP4Q01664 338 aa23.26■■□□□ 1.31
PDCD2-202ENST00000392090 CTDSPL2Q05D32 466 aa23.26■■□□□ 1.31
PDCD2-202ENST00000392090 ALX1Q15699 326 aa23.26■■□□□ 1.31
PDCD2-202ENST00000392090 FAM47AQ5JRC9 791 aa23.26■■□□□ 1.31
PDCD2-202ENST00000392090 DIAPH3Q9NSV4 1193 aa23.26■■□□□ 1.31
PDCD2-202ENST00000392090 IVNS1ABPQ9Y6Y0 642 aa23.26■■□□□ 1.31
PDCD2-202ENST00000392090 CCDC171Q6TFL3 1326 aa23.26■■□□□ 1.31
PDCD2-202ENST00000392090 HIP1O00291 1037 aa23.25■■□□□ 1.31
PDCD2-202ENST00000392090 HMGCRP04035 888 aa23.25■■□□□ 1.31
PDCD2-202ENST00000392090 PLS1Q14651 629 aa23.25■■□□□ 1.31
PDCD2-202ENST00000392090 FAM83BQ5T0W9 1011 aa23.25■■□□□ 1.31
PDCD2-202ENST00000392090 ZNF589Q86UQ0 364 aaPredicted RBP23.25■■□□□ 1.31
PDCD2-202ENST00000392090 NEDD1Q8NHV4 660 aa23.25■■□□□ 1.31
PDCD2-202ENST00000392090 ATG4CQ96DT6 458 aa23.25■■□□□ 1.31
PDCD2-202ENST00000392090 CEP95Q96GE4 821 aa23.25■■□□□ 1.31
PDCD2-202ENST00000392090 MTMR4Q9NYA4 1195 aa23.25■■□□□ 1.31
PDCD2-202ENST00000392090 PLXNB2O15031 1838 aa23.24■■□□□ 1.31
PDCD2-202ENST00000392090 IGKV6D-41A0A0C4DH26 115 aa23.24■■□□□ 1.31
PDCD2-202ENST00000392090 TTLL1O95922 423 aa23.24■■□□□ 1.31
PDCD2-202ENST00000392090 FGAP02671 866 aa23.24■■□□□ 1.31
PDCD2-202ENST00000392090 HSPD1P10809 573 aaKnown RBP23.24■■□□□ 1.31
PDCD2-202ENST00000392090 XRCC5P13010 732 aaKnown RBP23.24■■□□□ 1.31
PDCD2-202ENST00000392090 RGS2P41220 211 aa23.24■■□□□ 1.31
PDCD2-202ENST00000392090 SPATC1LQ9H0A9 340 aa23.24■■□□□ 1.31
PDCD2-202ENST00000392090 RLFQ13129 1914 aa23.23■■□□□ 1.31
PDCD2-202ENST00000392090 MYH4Q9Y623 1939 aa23.23■■□□□ 1.31
PDCD2-202ENST00000392090 TSPY2A6NKD2 308 aa23.23■■□□□ 1.31
PDCD2-202ENST00000392090 F5H6K3 240 aa23.23■■□□□ 1.31
PDCD2-202ENST00000392090 GJA8P48165 433 aa23.23■■□□□ 1.31
PDCD2-202ENST00000392090 KLRC3Q07444 240 aa23.23■■□□□ 1.31
PDCD2-202ENST00000392090 MORN1Q5T089 497 aa23.23■■□□□ 1.31
PDCD2-202ENST00000392090 CWC27Q6UX04 472 aaKnown RBP23.23■■□□□ 1.31
PDCD2-202ENST00000392090 TRMT44Q8IYL2 757 aaKnown RBP23.23■■□□□ 1.31
PDCD2-202ENST00000392090 FBXO28Q9NVF7 368 aa23.23■■□□□ 1.31
PDCD2-202ENST00000392090 ANAPC4Q9UJX5 808 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms