RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 ESR2Q92731 530 aa17.78■□□□□ 0.44
IGHV3-53-201ENST00000390627 MAP4K1Q92918 833 aa17.78■□□□□ 0.44
IGHV3-53-201ENST00000390627 ASCC2Q9H1I8 757 aaPredicted RBP17.78■□□□□ 0.44
IGHV3-53-201ENST00000390627 ANO2Q9NQ90 1003 aa17.78■□□□□ 0.44
IGHV3-53-201ENST00000390627 SYNPO2Q9UMS6 1093 aa17.78■□□□□ 0.44
IGHV3-53-201ENST00000390627 CASP8AP2Q9UKL3 1982 aa17.77■□□□□ 0.44
IGHV3-53-201ENST00000390627 C17orf99Q6UX52 265 aa17.77■□□□□ 0.44
IGHV3-53-201ENST00000390627 GTF3C2Q8WUA4 911 aaPredicted RBP17.77■□□□□ 0.44
IGHV3-53-201ENST00000390627 ERO1AQ96HE7 468 aa17.77■□□□□ 0.44
IGHV3-53-201ENST00000390627 LSG1Q9H089 658 aaKnown RBP17.77■□□□□ 0.44
IGHV3-53-201ENST00000390627 RPAP3Q9H6T3 665 aaPredicted RBP17.77■□□□□ 0.44
IGHV3-53-201ENST00000390627 CNNM2Q9H8M5 875 aa17.77■□□□□ 0.44
IGHV3-53-201ENST00000390627 CLIP2Q9UDT6 1046 aa17.77■□□□□ 0.44
IGHV3-53-201ENST00000390627 CPA4Q9UI42 421 aa17.77■□□□□ 0.44
IGHV3-53-201ENST00000390627 RBM8AQ9Y5S9 174 aaKnown RBP17.77■□□□□ 0.44
IGHV3-53-201ENST00000390627 NEDD4P46934 1319 aa17.76■□□□□ 0.43
IGHV3-53-201ENST00000390627 WDR46O15213 610 aaKnown RBP17.76■□□□□ 0.43
IGHV3-53-201ENST00000390627 GCLCP48506 637 aaPredicted RBP17.76■□□□□ 0.43
IGHV3-53-201ENST00000390627 KRT23Q9C075 422 aa17.76■□□□□ 0.43
IGHV3-53-201ENST00000390627 RAD21O60216 631 aa17.75■□□□□ 0.43
IGHV3-53-201ENST00000390627 CYP21A2P08686 494 aa17.75■□□□□ 0.43
IGHV3-53-201ENST00000390627 BCRP11274 1271 aa17.75■□□□□ 0.43
IGHV3-53-201ENST00000390627 TRDNQ13061 729 aa17.75■□□□□ 0.43
IGHV3-53-201ENST00000390627 CATSPERGQ6ZRH7 1159 aa17.75■□□□□ 0.43
IGHV3-53-201ENST00000390627 SPICE1Q8N0Z3 855 aa17.75■□□□□ 0.43
IGHV3-53-201ENST00000390627 MKL1Q969V6 931 aa17.75■□□□□ 0.43
IGHV3-53-201ENST00000390627 TANGO6Q9C0B7 1094 aa17.75■□□□□ 0.43
IGHV3-53-201ENST00000390627 TCP11L1Q9NUJ3 509 aa17.75■□□□□ 0.43
IGHV3-53-201ENST00000390627 STX8Q9UNK0 236 aa17.75■□□□□ 0.43
IGHV3-53-201ENST00000390627 MYH4Q9Y623 1939 aa17.74■□□□□ 0.43
IGHV3-53-201ENST00000390627 HERVK_113P62684 666 aa17.74■□□□□ 0.43
IGHV3-53-201ENST00000390627 KIF22Q14807 665 aa17.74■□□□□ 0.43
IGHV3-53-201ENST00000390627 ARHGEF6Q15052 776 aa17.74■□□□□ 0.43
IGHV3-53-201ENST00000390627 FAM110CQ1W6H9 321 aa17.74■□□□□ 0.43
IGHV3-53-201ENST00000390627 COL13A1Q5TAT6 717 aaPredicted RBP17.74■□□□□ 0.43
IGHV3-53-201ENST00000390627 IQCA1Q86XH1 822 aa17.74■□□□□ 0.43
IGHV3-53-201ENST00000390627 LRRC47Q8N1G4 583 aaKnown RBP17.74■□□□□ 0.43
IGHV3-53-201ENST00000390627 GMCL1P1Q8NEA9 526 aa17.74■□□□□ 0.43
IGHV3-53-201ENST00000390627 IL17RBQ9NRM6 502 aa17.74■□□□□ 0.43
IGHV3-53-201ENST00000390627 B4E1Z4 1266 aa17.73■□□□□ 0.43
IGHV3-53-201ENST00000390627 F5H6K3 240 aa17.73■□□□□ 0.43
IGHV3-53-201ENST00000390627 NMT2O60551 498 aa17.73■□□□□ 0.43
IGHV3-53-201ENST00000390627 KDM4AO75164 1064 aa17.73■□□□□ 0.43
IGHV3-53-201ENST00000390627 NDUFB10O96000 172 aa17.73■□□□□ 0.43
IGHV3-53-201ENST00000390627 NOVP48745 357 aa17.73■□□□□ 0.43
IGHV3-53-201ENST00000390627 LACTBP83111 547 aaPredicted RBP17.73■□□□□ 0.43
IGHV3-53-201ENST00000390627 KLRC3Q07444 240 aa17.73■□□□□ 0.43
IGHV3-53-201ENST00000390627 CCDC178Q5BJE1 867 aa17.73■□□□□ 0.43
IGHV3-53-201ENST00000390627 KIAA1755Q5JYT7 1200 aa17.73■□□□□ 0.43
IGHV3-53-201ENST00000390627 CTU1Q7Z7A3 348 aaKnown RBP17.73■□□□□ 0.43
IGHV3-53-201ENST00000390627 ANKRD13CQ8N6S4 541 aa17.73■□□□□ 0.43
IGHV3-53-201ENST00000390627 CD99L2Q8TCZ2 262 aa17.73■□□□□ 0.43
IGHV3-53-201ENST00000390627 P2RX7Q99572 595 aaKnown RBP17.73■□□□□ 0.43
IGHV3-53-201ENST00000390627 COG2Q14746 738 aa17.72■□□□□ 0.43
IGHV3-53-201ENST00000390627 RALYLQ86SE5 291 aaKnown RBP17.72■□□□□ 0.43
IGHV3-53-201ENST00000390627 TTC14Q96N46 770 aa17.72■□□□□ 0.43
IGHV3-53-201ENST00000390627 FLOT1O75955 427 aa17.71■□□□□ 0.43
IGHV3-53-201ENST00000390627 REC8O95072 547 aa17.71■□□□□ 0.43
IGHV3-53-201ENST00000390627 TOP1P11387 765 aaKnown RBP17.71■□□□□ 0.43
IGHV3-53-201ENST00000390627 FAM83BQ5T0W9 1011 aa17.71■□□□□ 0.43
IGHV3-53-201ENST00000390627 RNF20Q5VTR2 975 aa17.71■□□□□ 0.43
IGHV3-53-201ENST00000390627 SLFN13Q68D06 897 aa17.71■□□□□ 0.43
IGHV3-53-201ENST00000390627 LBX2Q6XYB7 198 aa17.71■□□□□ 0.43
IGHV3-53-201ENST00000390627 NCOA7Q8NI08 942 aa17.71■□□□□ 0.43
IGHV3-53-201ENST00000390627 HOXC10Q9NYD6 342 aa17.71■□□□□ 0.43
IGHV3-53-201ENST00000390627 MORF4L1Q9UBU8 362 aa17.71■□□□□ 0.43
IGHV3-53-201ENST00000390627 MYPNQ86TC9 1320 aa17.71■□□□□ 0.42
IGHV3-53-201ENST00000390627 SPDYE16A6NNV3 312 aaPredicted RBP17.7■□□□□ 0.42
IGHV3-53-201ENST00000390627 E7EWF7 191 aa17.7■□□□□ 0.42
IGHV3-53-201ENST00000390627 SLC27A2O14975 620 aa17.7■□□□□ 0.42
IGHV3-53-201ENST00000390627 PKN2Q16513 984 aaKnown RBP17.7■□□□□ 0.42
IGHV3-53-201ENST00000390627 CREB3L3Q68CJ9 461 aa17.7■□□□□ 0.42
IGHV3-53-201ENST00000390627 UBAC1Q9BSL1 405 aa17.7■□□□□ 0.42
IGHV3-53-201ENST00000390627 EFCC1Q9HA90 598 aa17.7■□□□□ 0.42
IGHV3-53-201ENST00000390627 ZSWIM5Q9P217 1185 aa17.7■□□□□ 0.42
IGHV3-53-201ENST00000390627 TRIM17Q9Y577 477 aa17.7■□□□□ 0.42
IGHV3-53-201ENST00000390627 GNRH1P01148 92 aa17.69■□□□□ 0.42
IGHV3-53-201ENST00000390627 DSG3P32926 999 aa17.69■□□□□ 0.42
IGHV3-53-201ENST00000390627 FCGRTP55899 365 aa17.69■□□□□ 0.42
IGHV3-53-201ENST00000390627 NECTIN1Q15223 517 aa17.69■□□□□ 0.42
IGHV3-53-201ENST00000390627 OTOP1Q7RTM1 612 aa17.69■□□□□ 0.42
IGHV3-53-201ENST00000390627 DGKHQ86XP1 1220 aa17.69■□□□□ 0.42
IGHV3-53-201ENST00000390627 MB21D1Q8N884 522 aa17.69■□□□□ 0.42
IGHV3-53-201ENST00000390627 GPRC5AQ8NFJ5 357 aa17.69■□□□□ 0.42
IGHV3-53-201ENST00000390627 NKX2-3Q8TAU0 364 aa17.69■□□□□ 0.42
IGHV3-53-201ENST00000390627 GMCL1Q96IK5 515 aa17.69■□□□□ 0.42
IGHV3-53-201ENST00000390627 ZSCAN10Q96SZ4 725 aaPredicted RBP17.69■□□□□ 0.42
IGHV3-53-201ENST00000390627 TMEM47Q9BQJ4 181 aa17.69■□□□□ 0.42
IGHV3-53-201ENST00000390627 ZKSCAN3Q9BRR0 538 aa17.69■□□□□ 0.42
IGHV3-53-201ENST00000390627 PAGR1Q9BTK6 254 aa17.69■□□□□ 0.42
IGHV3-53-201ENST00000390627 RABGAP1Q9Y3P9 1069 aa17.69■□□□□ 0.42
IGHV3-53-201ENST00000390627 FMNL1O95466 1100 aaPredicted RBP17.68■□□□□ 0.42
IGHV3-53-201ENST00000390627 BMP3P12645 472 aa17.68■□□□□ 0.42
IGHV3-53-201ENST00000390627 SLC1A4P43007 532 aa17.68■□□□□ 0.42
IGHV3-53-201ENST00000390627 PSMC4P43686 418 aa17.68■□□□□ 0.42
IGHV3-53-201ENST00000390627 ERVK-9P63128 1117 aa17.68■□□□□ 0.42
IGHV3-53-201ENST00000390627 ERVK-24P63145 666 aa17.68■□□□□ 0.42
IGHV3-53-201ENST00000390627 STOX1Q6ZVD7 989 aa17.68■□□□□ 0.42
IGHV3-53-201ENST00000390627 TNS4Q8IZW8 715 aa17.68■□□□□ 0.42
IGHV3-53-201ENST00000390627 NUP88Q99567 741 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms