RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 ANAPC4Q9UJX5 808 aa13.6□□□□□ -0.23
IGHV4-28-201ENST00000390612 RABGAP1Q9Y3P9 1069 aa13.6□□□□□ -0.23
IGHV4-28-201ENST00000390612 SPDYE16A6NNV3 312 aaPredicted RBP13.59□□□□□ -0.23
IGHV4-28-201ENST00000390612 TNPO2O14787 897 aaKnown RBP13.59□□□□□ -0.23
IGHV4-28-201ENST00000390612 ECM2O94769 699 aaPredicted RBP13.59□□□□□ -0.23
IGHV4-28-201ENST00000390612 FGRP09769 529 aa13.59□□□□□ -0.23
IGHV4-28-201ENST00000390612 SDSP20132 328 aa13.59□□□□□ -0.23
IGHV4-28-201ENST00000390612 FLT3LGP49771 235 aa13.59□□□□□ -0.23
IGHV4-28-201ENST00000390612 ERVK-9P63128 1117 aa13.59□□□□□ -0.23
IGHV4-28-201ENST00000390612 ERVK-24P63145 666 aa13.59□□□□□ -0.23
IGHV4-28-201ENST00000390612 NMIQ13287 307 aaPredicted RBP13.59□□□□□ -0.23
IGHV4-28-201ENST00000390612 GPRC5AQ8NFJ5 357 aa13.59□□□□□ -0.23
IGHV4-28-201ENST00000390612 SH3TC2Q8TF17 1288 aa13.59□□□□□ -0.23
IGHV4-28-201ENST00000390612 NAPBQ9H115 298 aa13.59□□□□□ -0.23
IGHV4-28-201ENST00000390612 MKNK2Q9HBH9 465 aa13.59□□□□□ -0.23
IGHV4-28-201ENST00000390612 ARHGEF10LQ9HCE6 1279 aa13.59□□□□□ -0.23
IGHV4-28-201ENST00000390612 NYAP2Q9P242 653 aa13.59□□□□□ -0.23
IGHV4-28-201ENST00000390612 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.59□□□□□ -0.23
IGHV4-28-201ENST00000390612 TACC3Q9Y6A5 838 aa13.59□□□□□ -0.23
IGHV4-28-201ENST00000390612 CEP290O15078 2479 aa13.59□□□□□ -0.23
IGHV4-28-201ENST00000390612 PLIN4Q96Q06 1357 aa13.58□□□□□ -0.23
IGHV4-28-201ENST00000390612 LAMA4Q16363 1823 aa13.58□□□□□ -0.24
IGHV4-28-201ENST00000390612 POTEFA5A3E0 1075 aa13.58□□□□□ -0.24
IGHV4-28-201ENST00000390612 TRIM6-TRIM34B2RNG4 842 aa13.58□□□□□ -0.24
IGHV4-28-201ENST00000390612 FGAP02671 866 aa13.58□□□□□ -0.24
IGHV4-28-201ENST00000390612 GRK4P32298 578 aa13.58□□□□□ -0.24
IGHV4-28-201ENST00000390612 PPARAQ07869 468 aa13.58□□□□□ -0.24
IGHV4-28-201ENST00000390612 ZNF589Q86UQ0 364 aaPredicted RBP13.58□□□□□ -0.24
IGHV4-28-201ENST00000390612 RAET1EQ8TD07 263 aa13.58□□□□□ -0.24
IGHV4-28-201ENST00000390612 PXYLP1Q8TE99 480 aa13.58□□□□□ -0.24
IGHV4-28-201ENST00000390612 MKL1Q969V6 931 aa13.58□□□□□ -0.24
IGHV4-28-201ENST00000390612 RILPL2Q969X0 211 aa13.58□□□□□ -0.24
IGHV4-28-201ENST00000390612 SH2D4AQ9H788 454 aa13.58□□□□□ -0.24
IGHV4-28-201ENST00000390612 ZNF287Q9HBT7 754 aa13.58□□□□□ -0.24
IGHV4-28-201ENST00000390612 ZMYM6O95789 1325 aa13.58□□□□□ -0.24
IGHV4-28-201ENST00000390612 HSPD1P10809 573 aaKnown RBP13.57□□□□□ -0.24
IGHV4-28-201ENST00000390612 MLLT1Q03111 559 aaPredicted RBP13.57□□□□□ -0.24
IGHV4-28-201ENST00000390612 COG2Q14746 738 aa13.57□□□□□ -0.24
IGHV4-28-201ENST00000390612 ZNF444Q8N0Y2 327 aaPredicted RBP13.57□□□□□ -0.24
IGHV4-28-201ENST00000390612 SLAIN1Q8ND83 568 aa13.57□□□□□ -0.24
IGHV4-28-201ENST00000390612 NEDD1Q8NHV4 660 aa13.57□□□□□ -0.24
IGHV4-28-201ENST00000390612 USP6NLQ92738 828 aa13.57□□□□□ -0.24
IGHV4-28-201ENST00000390612 COA7Q96BR5 231 aa13.57□□□□□ -0.24
IGHV4-28-201ENST00000390612 PORCNQ9H237 461 aa13.57□□□□□ -0.24
IGHV4-28-201ENST00000390612 HOXC10Q9NYD6 342 aa13.57□□□□□ -0.24
IGHV4-28-201ENST00000390612 BTBD7Q9P203 1132 aa13.57□□□□□ -0.24
IGHV4-28-201ENST00000390612 ADAMTS5Q9UNA0 930 aa13.57□□□□□ -0.24
IGHV4-28-201ENST00000390612 CCDC171Q6TFL3 1326 aa13.57□□□□□ -0.24
IGHV4-28-201ENST00000390612 WDR46O15213 610 aaKnown RBP13.56□□□□□ -0.24
IGHV4-28-201ENST00000390612 ADCY3O60266 1144 aa13.56□□□□□ -0.24
IGHV4-28-201ENST00000390612 PRDM1O75626 825 aa13.56□□□□□ -0.24
IGHV4-28-201ENST00000390612 GSPT1P15170 499 aaKnown RBP13.56□□□□□ -0.24
IGHV4-28-201ENST00000390612 MAPK4P31152 587 aa13.56□□□□□ -0.24
IGHV4-28-201ENST00000390612 DSG3P32926 999 aa13.56□□□□□ -0.24
IGHV4-28-201ENST00000390612 NOVP48745 357 aa13.56□□□□□ -0.24
IGHV4-28-201ENST00000390612 PDE4BQ07343 736 aa13.56□□□□□ -0.24
IGHV4-28-201ENST00000390612 STK11IPQ8N1F8 1099 aa13.56□□□□□ -0.24
IGHV4-28-201ENST00000390612 MTMR4Q9NYA4 1195 aa13.56□□□□□ -0.24
IGHV4-28-201ENST00000390612 SYNPO2Q9UMS6 1093 aa13.56□□□□□ -0.24
IGHV4-28-201ENST00000390612 ORC4O43929 436 aa13.55□□□□□ -0.24
IGHV4-28-201ENST00000390612 SLC3A2P08195 630 aaKnown RBP13.55□□□□□ -0.24
IGHV4-28-201ENST00000390612 CTDSPL2Q05D32 466 aa13.55□□□□□ -0.24
IGHV4-28-201ENST00000390612 MTFR1Q15390 333 aa13.55□□□□□ -0.24
IGHV4-28-201ENST00000390612 MORN1Q5T089 497 aa13.55□□□□□ -0.24
IGHV4-28-201ENST00000390612 TTC22Q5TAA0 569 aa13.55□□□□□ -0.24
IGHV4-28-201ENST00000390612 SPICE1Q8N0Z3 855 aa13.55□□□□□ -0.24
IGHV4-28-201ENST00000390612 CEP95Q96GE4 821 aa13.55□□□□□ -0.24
IGHV4-28-201ENST00000390612 PAGR1Q9BTK6 254 aa13.55□□□□□ -0.24
IGHV4-28-201ENST00000390612 INCENPQ9NQS7 918 aa13.55□□□□□ -0.24
IGHV4-28-201ENST00000390612 SMCHD1A6NHR9 2005 aa13.55□□□□□ -0.24
IGHV4-28-201ENST00000390612 ZNF236Q9UL36 1845 aa13.55□□□□□ -0.24
IGHV4-28-201ENST00000390612 F5H6K3 240 aa13.54□□□□□ -0.24
IGHV4-28-201ENST00000390612 HIP1O00291 1037 aa13.54□□□□□ -0.24
IGHV4-28-201ENST00000390612 XRCC5P13010 732 aaKnown RBP13.54□□□□□ -0.24
IGHV4-28-201ENST00000390612 ELNP15502 786 aa13.54□□□□□ -0.24
IGHV4-28-201ENST00000390612 EN2P19622 333 aaPredicted RBP13.54□□□□□ -0.24
IGHV4-28-201ENST00000390612 KLRC3Q07444 240 aa13.54□□□□□ -0.24
IGHV4-28-201ENST00000390612 GPR142Q7Z601 462 aa13.54□□□□□ -0.24
IGHV4-28-201ENST00000390612 MB21D1Q8N884 522 aa13.54□□□□□ -0.24
IGHV4-28-201ENST00000390612 TANGO6Q9C0B7 1094 aa13.54□□□□□ -0.24
IGHV4-28-201ENST00000390612 NBPF3Q9H094 633 aa13.54□□□□□ -0.24
IGHV4-28-201ENST00000390612 GOPCQ9HD26 462 aa13.54□□□□□ -0.24
IGHV4-28-201ENST00000390612 DNAH12Q6ZR08 3092 aa13.53□□□□□ -0.24
IGHV4-28-201ENST00000390612 NDUFB10O96000 172 aa13.53□□□□□ -0.24
IGHV4-28-201ENST00000390612 MFAP1P55081 439 aaKnown RBP13.53□□□□□ -0.24
IGHV4-28-201ENST00000390612 CCNA1P78396 465 aa13.53□□□□□ -0.24
IGHV4-28-201ENST00000390612 TFAP4Q01664 338 aa13.53□□□□□ -0.24
IGHV4-28-201ENST00000390612 ATP2B2Q01814 1243 aa13.53□□□□□ -0.24
IGHV4-28-201ENST00000390612 FAM47AQ5JRC9 791 aa13.53□□□□□ -0.24
IGHV4-28-201ENST00000390612 CWC27Q6UX04 472 aaKnown RBP13.53□□□□□ -0.24
IGHV4-28-201ENST00000390612 PLEKHH3Q7Z736 793 aa13.53□□□□□ -0.24
IGHV4-28-201ENST00000390612 SOCS4Q8WXH5 440 aa13.53□□□□□ -0.24
IGHV4-28-201ENST00000390612 TMEM106CQ9BVX2 250 aa13.53□□□□□ -0.24
IGHV4-28-201ENST00000390612 IL17RBQ9NRM6 502 aa13.53□□□□□ -0.24
IGHV4-28-201ENST00000390612 FBXO28Q9NVF7 368 aa13.53□□□□□ -0.24
IGHV4-28-201ENST00000390612 CLIP2Q9UDT6 1046 aa13.53□□□□□ -0.24
IGHV4-28-201ENST00000390612 PLXNA1Q9UIW2 1896 aa13.53□□□□□ -0.24
IGHV4-28-201ENST00000390612 FLOT1O75955 427 aa13.52□□□□□ -0.25
IGHV4-28-201ENST00000390612 TTLL1O95922 423 aa13.52□□□□□ -0.25
IGHV4-28-201ENST00000390612 IGHA2P01877 340 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms