RNA–Protein interactions for RNA: ENST00000390439.2

TRAV13-2-201, Transcript of T cell receptor alpha variable 13-2, humanhuman

APPRIS P1 BASIC

Gene TRAV13-2, Length 410 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2-201ENST00000390439 SMAD3P84022 425 aaKnown RBP11.78□□□□□ -0.52
TRAV13-2-201ENST00000390439 PLS1Q14651 629 aa11.78□□□□□ -0.52
TRAV13-2-201ENST00000390439 SEPT2Q15019 361 aa11.78□□□□□ -0.52
TRAV13-2-201ENST00000390439 SHHQ15465 462 aa11.78□□□□□ -0.52
TRAV13-2-201ENST00000390439 ERC1Q8IUD2 1116 aa11.78□□□□□ -0.52
TRAV13-2-201ENST00000390439 FTSJ3Q8IY81 847 aaKnown RBP11.78□□□□□ -0.52
TRAV13-2-201ENST00000390439 TMEM57Q8N5G2 664 aa11.78□□□□□ -0.52
TRAV13-2-201ENST00000390439 MAFAQ8NHW3 353 aaPredicted RBP11.78□□□□□ -0.52
TRAV13-2-201ENST00000390439 SH2D4AQ9H788 454 aa11.78□□□□□ -0.52
TRAV13-2-201ENST00000390439 MCM9Q9NXL9 1143 aa11.78□□□□□ -0.52
TRAV13-2-201ENST00000390439 FCER1AP12319 257 aa11.77□□□□□ -0.53
TRAV13-2-201ENST00000390439 ADCYAP1R1P41586 468 aa11.77□□□□□ -0.53
TRAV13-2-201ENST00000390439 TRIM60Q495X7 471 aa11.77□□□□□ -0.53
TRAV13-2-201ENST00000390439 C1orf53Q5VUE5 145 aa11.77□□□□□ -0.53
TRAV13-2-201ENST00000390439 TMEM179Q6ZVK1 233 aa11.77□□□□□ -0.53
TRAV13-2-201ENST00000390439 NCAPG2Q86XI2 1143 aa11.77□□□□□ -0.53
TRAV13-2-201ENST00000390439 SYMPKQ92797 1274 aaKnown RBP11.77□□□□□ -0.53
TRAV13-2-201ENST00000390439 BADQ92934 168 aa11.77□□□□□ -0.53
TRAV13-2-201ENST00000390439 EAF2Q96CJ1 260 aaPredicted RBP11.77□□□□□ -0.53
TRAV13-2-201ENST00000390439 ARHGEF10LQ9HCE6 1279 aa11.77□□□□□ -0.53
TRAV13-2-201ENST00000390439 NRBP1Q9UHY1 535 aa11.77□□□□□ -0.53
TRAV13-2-201ENST00000390439 TACC3Q9Y6A5 838 aa11.77□□□□□ -0.53
TRAV13-2-201ENST00000390439 SIPA1L1O43166 1804 aa11.76□□□□□ -0.53
TRAV13-2-201ENST00000390439 COBLO75128 1261 aa11.76□□□□□ -0.53
TRAV13-2-201ENST00000390439 FLOT1O75955 427 aa11.76□□□□□ -0.53
TRAV13-2-201ENST00000390439 SLC25A27O95847 323 aa11.76□□□□□ -0.53
TRAV13-2-201ENST00000390439 IGHA2P01877 340 aa11.76□□□□□ -0.53
TRAV13-2-201ENST00000390439 RARBP10826 455 aa11.76□□□□□ -0.53
TRAV13-2-201ENST00000390439 DSG3P32926 999 aa11.76□□□□□ -0.53
TRAV13-2-201ENST00000390439 GUCY1A2P33402 732 aa11.76□□□□□ -0.53
TRAV13-2-201ENST00000390439 GABPAQ06546 454 aa11.76□□□□□ -0.53
TRAV13-2-201ENST00000390439 SNX17Q15036 470 aa11.76□□□□□ -0.53
TRAV13-2-201ENST00000390439 LRRC41Q15345 812 aa11.76□□□□□ -0.53
TRAV13-2-201ENST00000390439 HSP90AB4PQ58FF6 505 aa11.76□□□□□ -0.53
TRAV13-2-201ENST00000390439 SLC9C2Q5TAH2 1124 aa11.76□□□□□ -0.53
TRAV13-2-201ENST00000390439 ANO1Q5XXA6 986 aa11.76□□□□□ -0.53
TRAV13-2-201ENST00000390439 RNF180Q86T96 592 aa11.76□□□□□ -0.53
TRAV13-2-201ENST00000390439 FERMT2Q96AC1 680 aa11.76□□□□□ -0.53
TRAV13-2-201ENST00000390439 TLR7Q9NYK1 1049 aaKnown RBP11.76□□□□□ -0.53
TRAV13-2-201ENST00000390439 SWAP70Q9UH65 585 aa11.76□□□□□ -0.53
TRAV13-2-201ENST00000390439 TNNQ9UQP3 1299 aa11.76□□□□□ -0.53
TRAV13-2-201ENST00000390439 MAST2Q6P0Q8 1798 aa11.75□□□□□ -0.53
TRAV13-2-201ENST00000390439 TMEM265A0A087WTH1 108 aa11.75□□□□□ -0.53
TRAV13-2-201ENST00000390439 FOSL2P15408 326 aa11.75□□□□□ -0.53
TRAV13-2-201ENST00000390439 TLE2Q04725 743 aa11.75□□□□□ -0.53
TRAV13-2-201ENST00000390439 C9orf50Q5SZB4 431 aa11.75□□□□□ -0.53
TRAV13-2-201ENST00000390439 SAMD1Q6SPF0 538 aaPredicted RBP11.75□□□□□ -0.53
TRAV13-2-201ENST00000390439 AACSQ86V21 672 aa11.75□□□□□ -0.53
TRAV13-2-201ENST00000390439 ITPRIPQ8IWB1 547 aa11.75□□□□□ -0.53
TRAV13-2-201ENST00000390439 AMOTL1Q8IY63 956 aa11.75□□□□□ -0.53
TRAV13-2-201ENST00000390439 RIOK1Q9BRS2 568 aaKnown RBP11.75□□□□□ -0.53
TRAV13-2-201ENST00000390439 ANTXR1Q9H6X2 564 aa11.75□□□□□ -0.53
TRAV13-2-201ENST00000390439 XPNPEP3Q9NQH7 507 aa11.75□□□□□ -0.53
TRAV13-2-201ENST00000390439 PDLIM7Q9NR12 457 aa11.75□□□□□ -0.53
TRAV13-2-201ENST00000390439 A0A1W2PRG0 241 aa11.74□□□□□ -0.53
TRAV13-2-201ENST00000390439 TRIM43BA6NCK2 446 aa11.74□□□□□ -0.53
TRAV13-2-201ENST00000390439 CLTBP09497 229 aa11.74□□□□□ -0.53
TRAV13-2-201ENST00000390439 RAG1P15918 1043 aa11.74□□□□□ -0.53
TRAV13-2-201ENST00000390439 COPB2P35606 906 aa11.74□□□□□ -0.53
TRAV13-2-201ENST00000390439 KCTD2Q14681 263 aa11.74□□□□□ -0.53
TRAV13-2-201ENST00000390439 PRAMEF19Q5SWL8 479 aa11.74□□□□□ -0.53
TRAV13-2-201ENST00000390439 MYLIPQ8WY64 445 aa11.74□□□□□ -0.53
TRAV13-2-201ENST00000390439 TRIM43Q96BQ3 446 aaPredicted RBP11.74□□□□□ -0.53
TRAV13-2-201ENST00000390439 DDRGK1Q96HY6 314 aa11.74□□□□□ -0.53
TRAV13-2-201ENST00000390439 MAML3Q96JK9 1138 aa11.74□□□□□ -0.53
TRAV13-2-201ENST00000390439 RNPC3Q96LT9 517 aaKnown RBP11.74□□□□□ -0.53
TRAV13-2-201ENST00000390439 CCDC17Q96LX7 622 aa11.74□□□□□ -0.53
TRAV13-2-201ENST00000390439 MMP19Q99542 508 aa11.74□□□□□ -0.53
TRAV13-2-201ENST00000390439 C1orf115Q9H7X2 142 aa11.74□□□□□ -0.53
TRAV13-2-201ENST00000390439 MYH1P12882 1939 aa11.74□□□□□ -0.53
TRAV13-2-201ENST00000390439 DCDC2CA8MYV0 355 aa11.73□□□□□ -0.53
TRAV13-2-201ENST00000390439 CCER2I3L3R5 266 aa11.73□□□□□ -0.53
TRAV13-2-201ENST00000390439 WDR46O15213 610 aaKnown RBP11.73□□□□□ -0.53
TRAV13-2-201ENST00000390439 PDE6AP16499 860 aa11.73□□□□□ -0.53
TRAV13-2-201ENST00000390439 ICA1Q05084 483 aa11.73□□□□□ -0.53
TRAV13-2-201ENST00000390439 FAM47AQ5JRC9 791 aa11.73□□□□□ -0.53
TRAV13-2-201ENST00000390439 FOCADQ5VW36 1801 aa11.73□□□□□ -0.53
TRAV13-2-201ENST00000390439 SH3RF1Q7Z6J0 888 aa11.73□□□□□ -0.53
TRAV13-2-201ENST00000390439 SPICE1Q8N0Z3 855 aa11.73□□□□□ -0.53
TRAV13-2-201ENST00000390439 TTC28Q96AY4 2481 aa11.73□□□□□ -0.53
TRAV13-2-201ENST00000390439 ATG4CQ96DT6 458 aa11.73□□□□□ -0.53
TRAV13-2-201ENST00000390439 VCPKMTQ9H867 229 aa11.73□□□□□ -0.53
TRAV13-2-201ENST00000390439 TMEM39AQ9NV64 488 aa11.73□□□□□ -0.53
TRAV13-2-201ENST00000390439 PHF24Q9UPV7 400 aa11.73□□□□□ -0.53
TRAV13-2-201ENST00000390439 CNPY2Q9Y2B0 182 aa11.73□□□□□ -0.53
TRAV13-2-201ENST00000390439 DIS3Q9Y2L1 958 aaKnown RBP11.73□□□□□ -0.53
TRAV13-2-201ENST00000390439 TMX2Q9Y320 296 aa11.73□□□□□ -0.53
TRAV13-2-201ENST00000390439 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.72□□□□□ -0.53
TRAV13-2-201ENST00000390439 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.72□□□□□ -0.53
TRAV13-2-201ENST00000390439 KIAA0355O15063 1070 aa11.72□□□□□ -0.53
TRAV13-2-201ENST00000390439 FPGSQ05932 587 aa11.72□□□□□ -0.53
TRAV13-2-201ENST00000390439 CCDC174Q6PII3 467 aa11.72□□□□□ -0.53
TRAV13-2-201ENST00000390439 CLASRPQ8N2M8 674 aaKnown RBP11.72□□□□□ -0.53
TRAV13-2-201ENST00000390439 NUP133Q8WUM0 1156 aa11.72□□□□□ -0.53
TRAV13-2-201ENST00000390439 TINF2Q9BSI4 451 aa11.72□□□□□ -0.53
TRAV13-2-201ENST00000390439 TSEN34Q9BSV6 310 aaKnown RBP11.72□□□□□ -0.53
TRAV13-2-201ENST00000390439 TTYH1Q9H313 450 aaPredicted RBP11.72□□□□□ -0.53
TRAV13-2-201ENST00000390439 GOPCQ9HD26 462 aa11.72□□□□□ -0.53
TRAV13-2-201ENST00000390439 DCP1AQ9NPI6 582 aaPredicted RBP11.72□□□□□ -0.53
TRAV13-2-201ENST00000390439 PRDM6Q9NQX0 595 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms