RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 H7C1D1 291 aa16.84■□□□□ 0.29
SYNGR1-204ENST00000381535 NCLP19338 710 aaKnown RBP16.84■□□□□ 0.29
SYNGR1-204ENST00000381535 GUCY1A2P33402 732 aa16.84■□□□□ 0.29
SYNGR1-204ENST00000381535 TRIM29Q14134 588 aa16.84■□□□□ 0.29
SYNGR1-204ENST00000381535 FAM173BQ6P4H8 233 aa16.84■□□□□ 0.29
SYNGR1-204ENST00000381535 USP48Q86UV5 1035 aa16.84■□□□□ 0.29
SYNGR1-204ENST00000381535 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.84■□□□□ 0.29
SYNGR1-204ENST00000381535 GJB4Q9NTQ9 266 aa16.84■□□□□ 0.29
SYNGR1-204ENST00000381535 CLIP2Q9UDT6 1046 aa16.84■□□□□ 0.29
SYNGR1-204ENST00000381535 ZNF541Q9H0D2 1346 aa16.84■□□□□ 0.29
SYNGR1-204ENST00000381535 PLIN4Q96Q06 1357 aa16.84■□□□□ 0.29
SYNGR1-204ENST00000381535 COL2A1P02458 1487 aaPredicted RBP16.84■□□□□ 0.29
SYNGR1-204ENST00000381535 UBE2Q2LH0YL09 131 aa16.83■□□□□ 0.28
SYNGR1-204ENST00000381535 TTLL1O95922 423 aa16.83■□□□□ 0.28
SYNGR1-204ENST00000381535 TNNI2P48788 182 aa16.83■□□□□ 0.28
SYNGR1-204ENST00000381535 CNTNAP1P78357 1384 aa16.83■□□□□ 0.28
SYNGR1-204ENST00000381535 CSPP1Q1MSJ5 1256 aa16.83■□□□□ 0.28
SYNGR1-204ENST00000381535 KRT40Q6A162 431 aa16.83■□□□□ 0.28
SYNGR1-204ENST00000381535 SAMD7Q7Z3H4 446 aa16.83■□□□□ 0.28
SYNGR1-204ENST00000381535 LZTS2Q9BRK4 669 aa16.83■□□□□ 0.28
SYNGR1-204ENST00000381535 MAD2L2Q9UI95 211 aa16.83■□□□□ 0.28
SYNGR1-204ENST00000381535 HERC5Q9UII4 1024 aaKnown RBP16.83■□□□□ 0.28
SYNGR1-204ENST00000381535 MTMR7Q9Y216 660 aa16.83■□□□□ 0.28
SYNGR1-204ENST00000381535 PALM3A6NDB9 673 aaPredicted RBP16.82■□□□□ 0.28
SYNGR1-204ENST00000381535 DDNO94850 711 aaPredicted RBP16.82■□□□□ 0.28
SYNGR1-204ENST00000381535 KRT85P78386 507 aa16.82■□□□□ 0.28
SYNGR1-204ENST00000381535 TBC1D10BQ4KMP7 808 aaPredicted RBP16.82■□□□□ 0.28
SYNGR1-204ENST00000381535 STAG2Q8N3U4 1231 aa16.82■□□□□ 0.28
SYNGR1-204ENST00000381535 GDPD2Q9HCC8 539 aa16.82■□□□□ 0.28
SYNGR1-204ENST00000381535 TFIP11Q9UBB9 837 aaKnown RBP16.82■□□□□ 0.28
SYNGR1-204ENST00000381535 EGFRP00533 1210 aa16.81■□□□□ 0.28
SYNGR1-204ENST00000381535 PARP1P09874 1014 aaKnown RBP16.81■□□□□ 0.28
SYNGR1-204ENST00000381535 ATP2B2Q01814 1243 aa16.81■□□□□ 0.28
SYNGR1-204ENST00000381535 PKN1Q16512 942 aa16.81■□□□□ 0.28
SYNGR1-204ENST00000381535 ABCB5Q2M3G0 1257 aa16.81■□□□□ 0.28
SYNGR1-204ENST00000381535 GPC2Q8N158 579 aa16.81■□□□□ 0.28
SYNGR1-204ENST00000381535 TMEM87AQ8NBN3 555 aa16.81■□□□□ 0.28
SYNGR1-204ENST00000381535 L3MBTL3Q96JM7 780 aaPredicted RBP16.81■□□□□ 0.28
SYNGR1-204ENST00000381535 ZNF396Q96N95 335 aaPredicted RBP16.81■□□□□ 0.28
SYNGR1-204ENST00000381535 TMEM39BQ9GZU3 492 aa16.81■□□□□ 0.28
SYNGR1-204ENST00000381535 KANSL2Q9H9L4 492 aa16.81■□□□□ 0.28
SYNGR1-204ENST00000381535 CABP5Q9NP86 173 aa16.81■□□□□ 0.28
SYNGR1-204ENST00000381535 DDX49Q9Y6V7 483 aaKnown RBP16.81■□□□□ 0.28
SYNGR1-204ENST00000381535 USP17L5A8MUK1 530 aa16.8■□□□□ 0.28
SYNGR1-204ENST00000381535 FIBPO43427 364 aa16.8■□□□□ 0.28
SYNGR1-204ENST00000381535 TBC1D12O60347 775 aa16.8■□□□□ 0.28
SYNGR1-204ENST00000381535 XBP1P17861 261 aa16.8■□□□□ 0.28
SYNGR1-204ENST00000381535 KIF23Q02241 960 aaPredicted RBP16.8■□□□□ 0.28
SYNGR1-204ENST00000381535 SAFBQ15424 915 aaKnown RBP eCLIP16.8■□□□□ 0.28
SYNGR1-204ENST00000381535 KIF4BQ2VIQ3 1234 aa16.8■□□□□ 0.28
SYNGR1-204ENST00000381535 TMEM179Q6ZVK1 233 aa16.8■□□□□ 0.28
SYNGR1-204ENST00000381535 MKL1Q969V6 931 aa16.8■□□□□ 0.28
SYNGR1-204ENST00000381535 RNF216Q9NWF9 866 aaPredicted RBP16.8■□□□□ 0.28
SYNGR1-204ENST00000381535 NYAP2Q9P242 653 aa16.8■□□□□ 0.28
SYNGR1-204ENST00000381535 PGAP2Q9UHJ9 254 aa16.8■□□□□ 0.28
SYNGR1-204ENST00000381535 CFAP45Q9UL16 551 aa16.8■□□□□ 0.28
SYNGR1-204ENST00000381535 CNTNAP5Q8WYK1 1306 aa16.79■□□□□ 0.28
SYNGR1-204ENST00000381535 hCG_1642624A0A1W2PR95 340 aa16.79■□□□□ 0.28
SYNGR1-204ENST00000381535 KLRF2D3W0D1 207 aa16.79■□□□□ 0.28
SYNGR1-204ENST00000381535 GDF11O95390 407 aa16.79■□□□□ 0.28
SYNGR1-204ENST00000381535 GOLGA8HP0CJ92 632 aa16.79■□□□□ 0.28
SYNGR1-204ENST00000381535 TNFAIP1Q13829 316 aa16.79■□□□□ 0.28
SYNGR1-204ENST00000381535 RASA3Q14644 834 aa16.79■□□□□ 0.28
SYNGR1-204ENST00000381535 SEPT2Q15019 361 aa16.79■□□□□ 0.28
SYNGR1-204ENST00000381535 ATL3Q6DD88 541 aa16.79■□□□□ 0.28
SYNGR1-204ENST00000381535 USP17L2Q6R6M4 530 aa16.79■□□□□ 0.28
SYNGR1-204ENST00000381535 BRAPQ7Z569 592 aa16.79■□□□□ 0.28
SYNGR1-204ENST00000381535 CLEC10AQ8IUN9 316 aa16.79■□□□□ 0.28
SYNGR1-204ENST00000381535 LRRC47Q8N1G4 583 aaKnown RBP16.79■□□□□ 0.28
SYNGR1-204ENST00000381535 SCAND2PQ9GZW5 306 aaPredicted RBP16.79■□□□□ 0.28
SYNGR1-204ENST00000381535 GPRC5DQ9NZD1 345 aa16.79■□□□□ 0.28
SYNGR1-204ENST00000381535 RBM27Q9P2N5 1060 aaKnown RBP16.79■□□□□ 0.28
SYNGR1-204ENST00000381535 TCHHQ07283 1943 aa16.78■□□□□ 0.28
SYNGR1-204ENST00000381535 GADD45BO75293 160 aaPredicted RBP16.78■□□□□ 0.28
SYNGR1-204ENST00000381535 EEF2P13639 858 aaKnown RBP16.78■□□□□ 0.28
SYNGR1-204ENST00000381535 SMARCA1P28370 1054 aa16.78■□□□□ 0.28
SYNGR1-204ENST00000381535 GNL2Q13823 731 aaKnown RBP16.78■□□□□ 0.28
SYNGR1-204ENST00000381535 RRP1BQ14684 758 aaKnown RBP16.78■□□□□ 0.28
SYNGR1-204ENST00000381535 SHROOM1Q2M3G4 852 aaPredicted RBP16.78■□□□□ 0.28
SYNGR1-204ENST00000381535 KLHL40Q2TBA0 621 aa16.78■□□□□ 0.28
SYNGR1-204ENST00000381535 MIGA2Q7L4E1 593 aa16.78■□□□□ 0.28
SYNGR1-204ENST00000381535 PIBF1Q8WXW3 757 aa16.78■□□□□ 0.28
SYNGR1-204ENST00000381535 HACL1Q9UJ83 578 aa16.78■□□□□ 0.28
SYNGR1-204ENST00000381535 KCNJ14Q9UNX9 436 aa16.78■□□□□ 0.28
SYNGR1-204ENST00000381535 SIPA1L1O43166 1804 aa16.77■□□□□ 0.28
SYNGR1-204ENST00000381535 KIF28PB7ZC32 967 aa16.77■□□□□ 0.28
SYNGR1-204ENST00000381535 GH2P01242 217 aa16.77■□□□□ 0.28
SYNGR1-204ENST00000381535 PDHBP11177 359 aa16.77■□□□□ 0.28
SYNGR1-204ENST00000381535 MAP3K10Q02779 954 aa16.77■□□□□ 0.28
SYNGR1-204ENST00000381535 PFKFB3Q16875 520 aaPredicted RBP16.77■□□□□ 0.28
SYNGR1-204ENST00000381535 SIAH1Q8IUQ4 282 aa16.77■□□□□ 0.28
SYNGR1-204ENST00000381535 SPATA32Q96LK8 384 aa16.77■□□□□ 0.28
SYNGR1-204ENST00000381535 SCAF8Q9UPN6 1271 aaKnown RBP16.77■□□□□ 0.28
SYNGR1-204ENST00000381535 PCNTO95613 3336 aa16.77■□□□□ 0.27
SYNGR1-204ENST00000381535 MYH8P13535 1937 aa16.76■□□□□ 0.27
SYNGR1-204ENST00000381535 ASTN2O75129 1339 aaPredicted RBP16.76■□□□□ 0.27
SYNGR1-204ENST00000381535 IQCA1LA6NCM1 817 aa16.76■□□□□ 0.27
SYNGR1-204ENST00000381535 MMP1P03956 469 aa16.76■□□□□ 0.27
SYNGR1-204ENST00000381535 SNHG28P0DPA3 235 aa16.76■□□□□ 0.27
SYNGR1-204ENST00000381535 SCG2P13521 617 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms