RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 SCG2P13521 617 aa14.2□□□□□ -0.14
DNMT3A-204ENST00000380756 TICAM2Q86XR7 235 aa14.2□□□□□ -0.14
DNMT3A-204ENST00000380756 GRAMD1CQ8IYS0 662 aa14.2□□□□□ -0.14
DNMT3A-204ENST00000380756 FMR1NBQ8N0W7 255 aaPredicted RBP14.2□□□□□ -0.14
DNMT3A-204ENST00000380756 RIMBP3CA6NJZ7 1639 aa14.2□□□□□ -0.14
DNMT3A-204ENST00000380756 RIMBP3BA6NNM3 1639 aa14.2□□□□□ -0.14
DNMT3A-204ENST00000380756 RIMBP3Q9UFD9 1639 aa14.2□□□□□ -0.14
DNMT3A-204ENST00000380756 CETN3O15182 167 aa14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 TSGA10IPQ3SY00 556 aa14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 CCDC174Q6PII3 467 aa14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 CCDC121Q6ZUS5 278 aa14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 C2CD5Q86YS7 1000 aa14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 WDR66Q8TBY9 1149 aa14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 ZC3H12CQ9C0D7 883 aaKnown RBP14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 GOLPH3LQ9H4A5 285 aa14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 GPCPD1Q9NPB8 672 aa14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 SEC31AO94979 1220 aaKnown RBP14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 CLCN6P51797 869 aa14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 CPLX4Q7Z7G2 160 aa14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 ZSWIM5Q9P217 1185 aa14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 MAN1B1Q9UKM7 699 aa14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 PPRC1Q5VV67 1664 aaKnown RBP14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 ATP8B1O43520 1251 aa14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 FAM13AO94988 1023 aa14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 NAA30Q147X3 362 aaPredicted RBP14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 VWA3BQ502W6 1294 aa14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 TYW1BQ6NUM6 668 aa14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 IFT20Q8IY31 132 aa14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 ALDH8A1Q9H2A2 487 aaPredicted RBP14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 NPHP4O75161 1426 aaPredicted RBP14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 HERC4Q5GLZ8 1057 aaPredicted RBP14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 RABEP2Q9H5N1 569 aa14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 SAMSN1Q9NSI8 373 aaKnown RBP14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 ASAP1Q9ULH1 1129 aa14.19□□□□□ -0.14
DNMT3A-204ENST00000380756 MMP1P03956 469 aa14.18□□□□□ -0.14
DNMT3A-204ENST00000380756 SLFN14P0C7P3 912 aa14.18□□□□□ -0.14
DNMT3A-204ENST00000380756 LIFRP42702 1097 aa14.18□□□□□ -0.14
DNMT3A-204ENST00000380756 COPB1P53618 953 aaKnown RBP14.18□□□□□ -0.14
DNMT3A-204ENST00000380756 RRAGAQ7L523 313 aa14.18□□□□□ -0.14
DNMT3A-204ENST00000380756 HOOK3Q86VS8 718 aa14.18□□□□□ -0.14
DNMT3A-204ENST00000380756 SLC35F6Q8N357 371 aa14.18□□□□□ -0.14
DNMT3A-204ENST00000380756 EEF2KMTQ96G04 330 aa14.18□□□□□ -0.14
DNMT3A-204ENST00000380756 USP42Q9H9J4 1324 aaKnown RBP14.18□□□□□ -0.14
DNMT3A-204ENST00000380756 PPFIA1Q13136 1202 aa14.18□□□□□ -0.14
DNMT3A-204ENST00000380756 SMYD4Q8IYR2 804 aaPredicted RBP14.18□□□□□ -0.14
DNMT3A-204ENST00000380756 REXO1Q8N1G1 1221 aaKnown RBP14.18□□□□□ -0.14
DNMT3A-204ENST00000380756 LZTS2Q9BRK4 669 aa14.18□□□□□ -0.14
DNMT3A-204ENST00000380756 MKRN1Q9UHC7 482 aaKnown RBP14.18□□□□□ -0.14
DNMT3A-204ENST00000380756 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.18□□□□□ -0.14
DNMT3A-204ENST00000380756 TMEM94Q12767 1356 aa14.18□□□□□ -0.14
DNMT3A-204ENST00000380756 SETD1BQ9UPS6 1966 aaKnown RBP14.18□□□□□ -0.14
DNMT3A-204ENST00000380756 LONRF2Q1L5Z9 754 aa14.18□□□□□ -0.14
DNMT3A-204ENST00000380756 ARPP21Q9UBL0 812 aaPredicted RBP14.18□□□□□ -0.14
DNMT3A-204ENST00000380756 RPN1P04843 607 aaKnown RBP14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 HPDP32754 393 aaPredicted RBP14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 INF2Q27J81 1249 aa14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 PNMA1Q8ND90 353 aa14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 NLRC4Q9NPP4 1024 aa14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 ZNF335Q9H4Z2 1342 aaPredicted RBP14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 HEG1Q9ULI3 1381 aa14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 KIAA1210Q9ULL0 1709 aa14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 CTNNA2P26232 953 aa14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 RXRBP28702 533 aa14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 EIF6P56537 245 aaKnown RBP14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 TRIM58Q8NG06 486 aa14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 OSBPL5Q9H0X9 879 aaPredicted RBP14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 DDX41Q9UJV9 622 aaKnown RBP14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 USP31Q70CQ4 1352 aa14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 NCAPD2Q15021 1401 aa14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 A6NNZ2 444 aa14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 RPS8P62241 208 aaKnown RBP14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 UBE4AQ14139 1066 aa14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 TUBB8Q3ZCM7 444 aa14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 CFAP221Q4G0U5 840 aa14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 B4GALNT4Q76KP1 1039 aa14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 PDE11AQ9HCR9 933 aa14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 CCDC151A5D8V7 595 aa14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 EZRP15311 586 aaKnown RBP14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 CALCRLQ16602 461 aa14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 CCDC26Q8TAB7 109 aa14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 UBLCP1Q8WVY7 318 aaPredicted RBP14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 CCDC114Q96M63 670 aa14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 NAP1L4Q99733 375 aaKnown RBP14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 KCNF1Q9H3M0 494 aa14.17□□□□□ -0.14
DNMT3A-204ENST00000380756 ANKARQ7Z5J8 1434 aa14.16□□□□□ -0.14
DNMT3A-204ENST00000380756 GNPATO15228 680 aa14.16□□□□□ -0.14
DNMT3A-204ENST00000380756 RBL2Q08999 1139 aa14.16□□□□□ -0.14
DNMT3A-204ENST00000380756 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.16□□□□□ -0.14
DNMT3A-204ENST00000380756 IQCDQ96DY2 449 aa14.16□□□□□ -0.14
DNMT3A-204ENST00000380756 NSRP1Q9H0G5 558 aaKnown RBP14.16□□□□□ -0.14
DNMT3A-204ENST00000380756 TRPC5Q9UL62 973 aaPredicted RBP14.16□□□□□ -0.14
DNMT3A-204ENST00000380756 SMIM23A6NLE4 172 aa14.16□□□□□ -0.14
DNMT3A-204ENST00000380756 PRKAB2O43741 272 aa14.16□□□□□ -0.14
DNMT3A-204ENST00000380756 COBLO75128 1261 aa14.16□□□□□ -0.14
DNMT3A-204ENST00000380756 KLHL30Q0D2K2 578 aa14.16□□□□□ -0.14
DNMT3A-204ENST00000380756 PAK2Q13177 524 aa14.16□□□□□ -0.14
DNMT3A-204ENST00000380756 MAPKAPK5Q8IW41 473 aa14.16□□□□□ -0.14
DNMT3A-204ENST00000380756 ANKS4BQ8N8V4 417 aa14.16□□□□□ -0.14
DNMT3A-204ENST00000380756 SELENOSQ9BQE4 189 aa14.16□□□□□ -0.14
DNMT3A-204ENST00000380756 INCENPQ9NQS7 918 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms