RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 ECHDC1Q9NTX5 307 aa5.62□□□□□ -1.51
C9orf72-203ENST00000380003 PNMA3Q9UL41 463 aa5.62□□□□□ -1.51
C9orf72-203ENST00000380003 TRIOO75962 3097 aa5.62□□□□□ -1.51
C9orf72-203ENST00000380003 SPDYE16A6NNV3 312 aaPredicted RBP5.61□□□□□ -1.51
C9orf72-203ENST00000380003 CNMDO75829 334 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 GJB1P08034 283 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 RRP1P56182 461 aaKnown RBP5.61□□□□□ -1.51
C9orf72-203ENST00000380003 ICA1Q05084 483 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 CACNB2Q08289 660 aaPredicted RBP5.61□□□□□ -1.51
C9orf72-203ENST00000380003 ARHGEF6Q15052 776 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 TTF1Q15361 905 aaPredicted RBP5.61□□□□□ -1.51
C9orf72-203ENST00000380003 HABP4Q5JVS0 413 aaKnown RBP5.61□□□□□ -1.51
C9orf72-203ENST00000380003 NCAPG2Q86XI2 1143 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 LRRC47Q8N1G4 583 aaKnown RBP5.61□□□□□ -1.51
C9orf72-203ENST00000380003 EXOC6Q8TAG9 804 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 DCTPP1Q9H773 170 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 EPB41L4AQ9HCS5 686 aaPredicted RBP5.61□□□□□ -1.51
C9orf72-203ENST00000380003 HOMER2Q9NSB8 354 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 ATAD5Q96QE3 1844 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 MYH1P12882 1939 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 GSG1L2A8MUP6 293 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 GPAA1O43292 621 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 FARP2O94887 1054 aaPredicted RBP5.61□□□□□ -1.51
C9orf72-203ENST00000380003 IGHDP01880 384 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 UBXN2AP68543 259 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 CTDSPL2Q05D32 466 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 PDE3AQ14432 1141 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 FAM83BQ5T0W9 1011 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 C7orf61Q8IZ16 206 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 NPLOC4Q8TAT6 608 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 FERMT2Q96AC1 680 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 FSD1Q9BTV5 496 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 WDR18Q9BV38 432 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.61□□□□□ -1.51
C9orf72-203ENST00000380003 SUPT16HQ9Y5B9 1047 aaKnown RBP5.61□□□□□ -1.51
C9orf72-203ENST00000380003 RAB11FIP3O75154 756 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 ERCC3P19447 782 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 TDO2P48775 406 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 HAND2P61296 217 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 SH3D19Q5HYK7 790 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 C12orf60Q5U649 245 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 CATSPERGQ6ZRH7 1159 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 METTL16Q86W50 562 aaKnown RBP5.61□□□□□ -1.51
C9orf72-203ENST00000380003 PPP1R13LQ8WUF5 828 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 LRCH3Q96II8 777 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 FAM227BQ96M60 508 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 STRBPQ96SI9 672 aaKnown RBP5.61□□□□□ -1.51
C9orf72-203ENST00000380003 NUDT12Q9BQG2 462 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.61□□□□□ -1.51
C9orf72-203ENST00000380003 MKNK2Q9HBH9 465 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 ZCCHC17Q9NP64 241 aaKnown RBP5.61□□□□□ -1.51
C9orf72-203ENST00000380003 RIPK3Q9Y572 518 aa5.61□□□□□ -1.51
C9orf72-203ENST00000380003 EVI5O60447 810 aa5.6□□□□□ -1.51
C9orf72-203ENST00000380003 MS4A1P11836 297 aa5.6□□□□□ -1.51
C9orf72-203ENST00000380003 HOXA7P31268 230 aaPredicted RBP5.6□□□□□ -1.51
C9orf72-203ENST00000380003 MDM2Q00987 491 aaPredicted RBP5.6□□□□□ -1.51
C9orf72-203ENST00000380003 GJC2Q5T442 439 aaPredicted RBP5.6□□□□□ -1.51
C9orf72-203ENST00000380003 SLAIN1Q8ND83 568 aa5.6□□□□□ -1.51
C9orf72-203ENST00000380003 PI4K2BQ8TCG2 481 aa5.6□□□□□ -1.51
C9orf72-203ENST00000380003 PURBQ96QR8 312 aaKnown RBP5.6□□□□□ -1.51
C9orf72-203ENST00000380003 MOV10L1Q9BXT6 1211 aaKnown RBP5.6□□□□□ -1.51
C9orf72-203ENST00000380003 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.6□□□□□ -1.51
C9orf72-203ENST00000380003 CLIP2Q9UDT6 1046 aa5.6□□□□□ -1.51
C9orf72-203ENST00000380003 C19orf81C9J6K1 198 aa5.6□□□□□ -1.51
C9orf72-203ENST00000380003 FXR1P51114 621 aaKnown RBP eCLIP5.6□□□□□ -1.51
C9orf72-203ENST00000380003 RRP12Q5JTH9 1297 aaKnown RBP5.6□□□□□ -1.51
C9orf72-203ENST00000380003 USP17L2Q6R6M4 530 aa5.6□□□□□ -1.51
C9orf72-203ENST00000380003 DPP9Q86TI2 863 aa5.6□□□□□ -1.51
C9orf72-203ENST00000380003 RILPL2Q969X0 211 aa5.6□□□□□ -1.51
C9orf72-203ENST00000380003 FAM161BQ96MY7 647 aa5.6□□□□□ -1.51
C9orf72-203ENST00000380003 SENP6Q9GZR1 1112 aaPredicted RBP5.6□□□□□ -1.51
C9orf72-203ENST00000380003 HMX1Q9NP08 348 aaPredicted RBP5.6□□□□□ -1.51
C9orf72-203ENST00000380003 PAK6Q9NQU5 681 aaPredicted RBP5.6□□□□□ -1.51
C9orf72-203ENST00000380003 TOMM22Q9NS69 142 aa5.6□□□□□ -1.51
C9orf72-203ENST00000380003 TACC3Q9Y6A5 838 aa5.6□□□□□ -1.51
C9orf72-203ENST00000380003 TRIM6-TRIM34B2RNG4 842 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 USP17L15C9J2P7 530 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 USP17L13C9JLJ4 530 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 USP17L11C9JVI0 530 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 USP17L18D6R9N7 530 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 USP17L22D6RA61 530 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 USP17L17D6RBQ6 530 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 USP17L19D6RCP7 530 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 USP17L20D6RJB6 530 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 SOX1O00570 391 aaPredicted RBP5.59□□□□□ -1.51
C9orf72-203ENST00000380003 COBLO75128 1261 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 MX1P20591 662 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 ADORA2AP29274 412 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 GCLCP48506 637 aaPredicted RBP5.59□□□□□ -1.51
C9orf72-203ENST00000380003 MNX1P50219 401 aaPredicted RBP5.59□□□□□ -1.51
C9orf72-203ENST00000380003 USP17L24Q0WX57 530 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 TMEM132BQ14DG7 1078 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 KBTBD3Q8NAB2 608 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 KIFC2Q96AC6 838 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 CEP95Q96GE4 821 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 KIAA1683Q9H0B3 1180 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 CPVLQ9H3G5 476 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 STX8Q9UNK0 236 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 FOXP2O15409 715 aa5.59□□□□□ -1.51
C9orf72-203ENST00000380003 HMGCRP04035 888 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms