RNA–Protein interactions for RNA: ENST00000379697.7

SH3KBP1-201, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

TSL 5 BASIC

Gene SH3KBP1, Length 1,944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-201ENST00000379697 KIF28PB7ZC32 967 aa17.29■□□□□ 0.36
SH3KBP1-201ENST00000379697 GADD45BO75293 160 aaPredicted RBP17.29■□□□□ 0.36
SH3KBP1-201ENST00000379697 EGFRP00533 1210 aa17.29■□□□□ 0.36
SH3KBP1-201ENST00000379697 HERC5Q9UII4 1024 aaKnown RBP17.29■□□□□ 0.36
SH3KBP1-201ENST00000379697 ELP1O95163 1332 aa17.29■□□□□ 0.36
SH3KBP1-201ENST00000379697 hCG_1642624A0A1W2PR95 340 aa17.29■□□□□ 0.36
SH3KBP1-201ENST00000379697 PALM3A6NDB9 673 aaPredicted RBP17.29■□□□□ 0.36
SH3KBP1-201ENST00000379697 PPP4R3BQ5MIZ7 849 aa17.29■□□□□ 0.36
SH3KBP1-201ENST00000379697 ATL3Q6DD88 541 aa17.29■□□□□ 0.36
SH3KBP1-201ENST00000379697 RASGRP2Q7LDG7 609 aa17.29■□□□□ 0.36
SH3KBP1-201ENST00000379697 SPATA32Q96LK8 384 aa17.29■□□□□ 0.36
SH3KBP1-201ENST00000379697 CNOT7Q9UIV1 285 aaKnown RBP17.29■□□□□ 0.36
SH3KBP1-201ENST00000379697 CFAP45Q9UL16 551 aa17.29■□□□□ 0.36
SH3KBP1-201ENST00000379697 MMP1P03956 469 aa17.28■□□□□ 0.36
SH3KBP1-201ENST00000379697 PARP1P09874 1014 aaKnown RBP17.28■□□□□ 0.36
SH3KBP1-201ENST00000379697 LRRC47Q8N1G4 583 aaKnown RBP17.28■□□□□ 0.36
SH3KBP1-201ENST00000379697 LEO1Q8WVC0 666 aaPredicted RBP17.28■□□□□ 0.36
SH3KBP1-201ENST00000379697 ZNF396Q96N95 335 aaPredicted RBP17.28■□□□□ 0.36
SH3KBP1-201ENST00000379697 TMEM39BQ9GZU3 492 aa17.28■□□□□ 0.36
SH3KBP1-201ENST00000379697 RBM27Q9P2N5 1060 aaKnown RBP17.28■□□□□ 0.36
SH3KBP1-201ENST00000379697 CLIP2Q9UDT6 1046 aa17.28■□□□□ 0.36
SH3KBP1-201ENST00000379697 XBP1P17861 261 aa17.27■□□□□ 0.36
SH3KBP1-201ENST00000379697 UBE2HP62256 183 aa17.27■□□□□ 0.36
SH3KBP1-201ENST00000379697 GNL2Q13823 731 aaKnown RBP17.27■□□□□ 0.36
SH3KBP1-201ENST00000379697 SHROOM1Q2M3G4 852 aaPredicted RBP17.27■□□□□ 0.36
SH3KBP1-201ENST00000379697 RBM26Q5T8P6 1007 aaKnown RBP17.27■□□□□ 0.36
SH3KBP1-201ENST00000379697 LZTS2Q9BRK4 669 aa17.27■□□□□ 0.36
SH3KBP1-201ENST00000379697 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.27■□□□□ 0.36
SH3KBP1-201ENST00000379697 KCNJ14Q9UNX9 436 aa17.27■□□□□ 0.36
SH3KBP1-201ENST00000379697 MYH15Q9Y2K3 1946 aa17.27■□□□□ 0.36
SH3KBP1-201ENST00000379697 GOLGA8HP0CJ92 632 aa17.27■□□□□ 0.35
SH3KBP1-201ENST00000379697 PDHBP11177 359 aa17.27■□□□□ 0.35
SH3KBP1-201ENST00000379697 U2AF2P26368 475 aaKnown RBP eCLIP17.27■□□□□ 0.35
SH3KBP1-201ENST00000379697 GSE1Q14687 1217 aa17.27■□□□□ 0.35
SH3KBP1-201ENST00000379697 SAFBQ15424 915 aaKnown RBP eCLIP17.27■□□□□ 0.35
SH3KBP1-201ENST00000379697 MYSM1Q5VVJ2 828 aa17.27■□□□□ 0.35
SH3KBP1-201ENST00000379697 USP17L2Q6R6M4 530 aa17.27■□□□□ 0.35
SH3KBP1-201ENST00000379697 TMEM179Q6ZVK1 233 aa17.27■□□□□ 0.35
SH3KBP1-201ENST00000379697 SAMD7Q7Z3H4 446 aa17.27■□□□□ 0.35
SH3KBP1-201ENST00000379697 USP28Q96RU2 1077 aa17.27■□□□□ 0.35
SH3KBP1-201ENST00000379697 FTOQ9C0B1 505 aaKnown RBP eCLIP17.27■□□□□ 0.35
SH3KBP1-201ENST00000379697 KANSL2Q9H9L4 492 aa17.27■□□□□ 0.35
SH3KBP1-201ENST00000379697 VPS54Q9P1Q0 977 aa17.27■□□□□ 0.35
SH3KBP1-201ENST00000379697 MYH6P13533 1939 aa17.27■□□□□ 0.35
SH3KBP1-201ENST00000379697 USP17L5A8MUK1 530 aa17.26■□□□□ 0.35
SH3KBP1-201ENST00000379697 KLRF2D3W0D1 207 aa17.26■□□□□ 0.35
SH3KBP1-201ENST00000379697 GDF11O95390 407 aa17.26■□□□□ 0.35
SH3KBP1-201ENST00000379697 SCG2P13521 617 aa17.26■□□□□ 0.35
SH3KBP1-201ENST00000379697 TNFAIP1Q13829 316 aa17.26■□□□□ 0.35
SH3KBP1-201ENST00000379697 PFKFB3Q16875 520 aaPredicted RBP17.26■□□□□ 0.35
SH3KBP1-201ENST00000379697 ABCB5Q2M3G0 1257 aa17.26■□□□□ 0.35
SH3KBP1-201ENST00000379697 SLC35G1Q2M3R5 365 aa17.26■□□□□ 0.35
SH3KBP1-201ENST00000379697 TBC1D10BQ4KMP7 808 aaPredicted RBP17.26■□□□□ 0.35
SH3KBP1-201ENST00000379697 CDAN1Q8IWY9 1227 aa17.26■□□□□ 0.35
SH3KBP1-201ENST00000379697 DIS3L2Q8IYB7 885 aaKnown RBP17.26■□□□□ 0.35
SH3KBP1-201ENST00000379697 SHISA4Q96DD7 197 aa17.26■□□□□ 0.35
SH3KBP1-201ENST00000379697 SNHG28P0DPA3 235 aa17.25■□□□□ 0.35
SH3KBP1-201ENST00000379697 TNNI2P48788 182 aa17.25■□□□□ 0.35
SH3KBP1-201ENST00000379697 ATP2B2Q01814 1243 aa17.25■□□□□ 0.35
SH3KBP1-201ENST00000379697 CEBPZQ03701 1054 aaKnown RBP17.25■□□□□ 0.35
SH3KBP1-201ENST00000379697 KIF4BQ2VIQ3 1234 aa17.25■□□□□ 0.35
SH3KBP1-201ENST00000379697 CAVIN1Q6NZI2 390 aaKnown RBP17.25■□□□□ 0.35
SH3KBP1-201ENST00000379697 GPC2Q8N158 579 aa17.25■□□□□ 0.35
SH3KBP1-201ENST00000379697 PIBF1Q8WXW3 757 aa17.25■□□□□ 0.35
SH3KBP1-201ENST00000379697 SPZ1Q9BXG8 430 aa17.25■□□□□ 0.35
SH3KBP1-201ENST00000379697 DICER1Q9UPY3 1922 aaKnown RBP17.25■□□□□ 0.35
SH3KBP1-201ENST00000379697 CYTH3O43739 400 aa17.25■□□□□ 0.35
SH3KBP1-201ENST00000379697 YBX3P16989 372 aaKnown RBP eCLIP17.25■□□□□ 0.35
SH3KBP1-201ENST00000379697 ICA1Q05084 483 aa17.25■□□□□ 0.35
SH3KBP1-201ENST00000379697 SEPT2Q15019 361 aa17.25■□□□□ 0.35
SH3KBP1-201ENST00000379697 PHF20Q9BVI0 1012 aa17.25■□□□□ 0.35
SH3KBP1-201ENST00000379697 NYAP2Q9P242 653 aa17.25■□□□□ 0.35
SH3KBP1-201ENST00000379697 PGAP2Q9UHJ9 254 aa17.25■□□□□ 0.35
SH3KBP1-201ENST00000379697 BTBD18B2RXH4 712 aa17.24■□□□□ 0.35
SH3KBP1-201ENST00000379697 GH2P01242 217 aa17.24■□□□□ 0.35
SH3KBP1-201ENST00000379697 EEF2P13639 858 aaKnown RBP17.24■□□□□ 0.35
SH3KBP1-201ENST00000379697 RASA3Q14644 834 aa17.24■□□□□ 0.35
SH3KBP1-201ENST00000379697 RRP1BQ14684 758 aaKnown RBP17.24■□□□□ 0.35
SH3KBP1-201ENST00000379697 ASPRV1Q53RT3 343 aa17.24■□□□□ 0.35
SH3KBP1-201ENST00000379697 NOSTRINQ8IVI9 506 aa17.24■□□□□ 0.35
SH3KBP1-201ENST00000379697 FOXP1Q9H334 677 aaPredicted RBP17.24■□□□□ 0.35
SH3KBP1-201ENST00000379697 BAZ2BQ9UIF8 2168 aaKnown RBP17.24■□□□□ 0.35
SH3KBP1-201ENST00000379697 H7C1D1 291 aa17.23■□□□□ 0.35
SH3KBP1-201ENST00000379697 TBC1D12O60347 775 aa17.23■□□□□ 0.35
SH3KBP1-201ENST00000379697 JAG1P78504 1218 aa17.23■□□□□ 0.35
SH3KBP1-201ENST00000379697 MKL1Q969V6 931 aa17.23■□□□□ 0.35
SH3KBP1-201ENST00000379697 CABP5Q9NP86 173 aa17.23■□□□□ 0.35
SH3KBP1-201ENST00000379697 RTEL1Q9NZ71 1219 aa17.23■□□□□ 0.35
SH3KBP1-201ENST00000379697 RCOR1Q9UKL0 485 aa17.23■□□□□ 0.35
SH3KBP1-201ENST00000379697 SBF1O95248 1867 aa17.23■□□□□ 0.35
SH3KBP1-201ENST00000379697 ASTN2O75129 1339 aaPredicted RBP17.23■□□□□ 0.35
SH3KBP1-201ENST00000379697 SMARCA1P28370 1054 aa17.23■□□□□ 0.35
SH3KBP1-201ENST00000379697 TPRNQ4KMQ1 711 aa17.23■□□□□ 0.35
SH3KBP1-201ENST00000379697 FRMPD2Q68DX3 1309 aaPredicted RBP17.23■□□□□ 0.35
SH3KBP1-201ENST00000379697 CPVLQ9H3G5 476 aa17.23■□□□□ 0.35
SH3KBP1-201ENST00000379697 POLR3EQ9NVU0 708 aa17.23■□□□□ 0.35
SH3KBP1-201ENST00000379697 GPRC5DQ9NZD1 345 aa17.23■□□□□ 0.35
SH3KBP1-201ENST00000379697 SCAF8Q9UPN6 1271 aaKnown RBP17.23■□□□□ 0.35
SH3KBP1-201ENST00000379697 VEGFAP15692 232 aaPredicted RBP17.22■□□□□ 0.35
SH3KBP1-201ENST00000379697 ZNF543Q08ER8 600 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms