RNA–Protein interactions for RNA: ENST00000378251.2

LRRC47-201, Transcript of leucine rich repeat containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC47, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-201ENST00000378251 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.1■□□□□ 0.49
LRRC47-201ENST00000378251 BCL9O00512 1426 aa18.1■□□□□ 0.49
LRRC47-201ENST00000378251 ELP1O95163 1332 aa18.1■□□□□ 0.49
LRRC47-201ENST00000378251 SH2B2O14492 632 aaPredicted RBP18.1■□□□□ 0.49
LRRC47-201ENST00000378251 NR5A1Q13285 461 aa18.1■□□□□ 0.49
LRRC47-201ENST00000378251 TMX1Q9H3N1 280 aa18.1■□□□□ 0.49
LRRC47-201ENST00000378251 SSR1P43307 286 aaKnown RBP18.1■□□□□ 0.49
LRRC47-201ENST00000378251 DYMQ7RTS9 669 aa18.1■□□□□ 0.49
LRRC47-201ENST00000378251 FTOQ9C0B1 505 aaKnown RBP eCLIP18.1■□□□□ 0.49
LRRC47-201ENST00000378251 LMBRD1Q9NUN5 540 aa18.1■□□□□ 0.49
LRRC47-201ENST00000378251 UBXN2AP68543 259 aa18.09■□□□□ 0.49
LRRC47-201ENST00000378251 CALCRLQ16602 461 aa18.09■□□□□ 0.49
LRRC47-201ENST00000378251 COA7Q96BR5 231 aa18.09■□□□□ 0.49
LRRC47-201ENST00000378251 CAVIN2O95810 425 aa18.09■□□□□ 0.49
LRRC47-201ENST00000378251 PGBD1Q96JS3 809 aa18.09■□□□□ 0.49
LRRC47-201ENST00000378251 DPEP1P16444 411 aa18.09■□□□□ 0.49
LRRC47-201ENST00000378251 TRIM21P19474 475 aaKnown RBP18.09■□□□□ 0.49
LRRC47-201ENST00000378251 CAMTA1Q9Y6Y1 1673 aa18.09■□□□□ 0.49
LRRC47-201ENST00000378251 CCP110O43303 1012 aa18.09■□□□□ 0.49
LRRC47-201ENST00000378251 CLIC6Q96NY7 704 aa18.09■□□□□ 0.49
LRRC47-201ENST00000378251 POLR1AO95602 1720 aaPredicted RBP18.08■□□□□ 0.49
LRRC47-201ENST00000378251 TESPA1A2RU30 521 aaPredicted RBP18.08■□□□□ 0.49
LRRC47-201ENST00000378251 DDAH1O94760 285 aa18.08■□□□□ 0.49
LRRC47-201ENST00000378251 C3orf67Q6ZVT6 689 aa18.08■□□□□ 0.49
LRRC47-201ENST00000378251 SV2BQ7L1I2 683 aa18.08■□□□□ 0.49
LRRC47-201ENST00000378251 PIGSQ96S52 555 aa18.08■□□□□ 0.49
LRRC47-201ENST00000378251 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.08■□□□□ 0.49
LRRC47-201ENST00000378251 AS3MTQ9HBK9 375 aa18.08■□□□□ 0.49
LRRC47-201ENST00000378251 SWAP70Q9UH65 585 aa18.08■□□□□ 0.49
LRRC47-201ENST00000378251 CUTAO60888 179 aa18.08■□□□□ 0.48
LRRC47-201ENST00000378251 CETN1Q12798 172 aa18.08■□□□□ 0.48
LRRC47-201ENST00000378251 PRR16Q569H4 304 aa18.08■□□□□ 0.48
LRRC47-201ENST00000378251 NSUN4Q96CB9 384 aaKnown RBP18.08■□□□□ 0.48
LRRC47-201ENST00000378251 IL25Q9H293 177 aa18.08■□□□□ 0.48
LRRC47-201ENST00000378251 NEDD4P46934 1319 aa18.08■□□□□ 0.48
LRRC47-201ENST00000378251 NEMFO60524 1076 aa18.08■□□□□ 0.48
LRRC47-201ENST00000378251 SNAP25P60880 206 aa18.08■□□□□ 0.48
LRRC47-201ENST00000378251 CYB5R4Q7L1T6 521 aa18.08■□□□□ 0.48
LRRC47-201ENST00000378251 GLT8D2Q9H1C3 349 aa18.08■□□□□ 0.48
LRRC47-201ENST00000378251 TXNRD3Q86VQ6 643 aa18.07■□□□□ 0.48
LRRC47-201ENST00000378251 ZKSCAN5Q9Y2L8 839 aa18.07■□□□□ 0.48
LRRC47-201ENST00000378251 UTYO14607 1347 aa18.07■□□□□ 0.48
LRRC47-201ENST00000378251 SPA17Q15506 151 aa18.07■□□□□ 0.48
LRRC47-201ENST00000378251 SUPT20HL1Q3ZLR7 823 aa18.07■□□□□ 0.48
LRRC47-201ENST00000378251 PLCD1P51178 756 aa18.07■□□□□ 0.48
LRRC47-201ENST00000378251 CCDC186Q7Z3E2 898 aa18.07■□□□□ 0.48
LRRC47-201ENST00000378251 CCPG1Q9ULG6 757 aa18.07■□□□□ 0.48
LRRC47-201ENST00000378251 PLEKHA8P1O95397 391 aa18.07■□□□□ 0.48
LRRC47-201ENST00000378251 FAM212AQ96EL1 285 aa18.07■□□□□ 0.48
LRRC47-201ENST00000378251 TBC1D7Q9P0N9 293 aa18.07■□□□□ 0.48
LRRC47-201ENST00000378251 MROH7-TTC4A0A0A0MT08 1334 aa18.06■□□□□ 0.48
LRRC47-201ENST00000378251 TECP42680 631 aa18.06■□□□□ 0.48
LRRC47-201ENST00000378251 PDE4DQ08499 809 aa18.06■□□□□ 0.48
LRRC47-201ENST00000378251 GPATCH4Q5T3I0 446 aaKnown RBP18.06■□□□□ 0.48
LRRC47-201ENST00000378251 FOXP4Q8IVH2 680 aaPredicted RBP18.06■□□□□ 0.48
LRRC47-201ENST00000378251 ANKRD35Q8N283 1001 aa18.06■□□□□ 0.48
LRRC47-201ENST00000378251 HARSP12081 509 aaKnown RBP18.06■□□□□ 0.48
LRRC47-201ENST00000378251 LIFRP42702 1097 aa18.06■□□□□ 0.48
LRRC47-201ENST00000378251 HS2ST1Q7LGA3 356 aa18.06■□□□□ 0.48
LRRC47-201ENST00000378251 TMEM63CQ9P1W3 806 aa18.06■□□□□ 0.48
LRRC47-201ENST00000378251 CLIC4Q9Y696 253 aa18.06■□□□□ 0.48
LRRC47-201ENST00000378251 SEPT2Q15019 361 aa18.06■□□□□ 0.48
LRRC47-201ENST00000378251 CTR9Q6PD62 1173 aa18.06■□□□□ 0.48
LRRC47-201ENST00000378251 SPAG5Q96R06 1193 aa18.06■□□□□ 0.48
LRRC47-201ENST00000378251 BLZF1Q9H2G9 400 aa18.06■□□□□ 0.48
LRRC47-201ENST00000378251 YEATS4O95619 227 aa18.05■□□□□ 0.48
LRRC47-201ENST00000378251 BMP3P12645 472 aa18.05■□□□□ 0.48
LRRC47-201ENST00000378251 PTGDRQ13258 359 aa18.05■□□□□ 0.48
LRRC47-201ENST00000378251 AMNQ9BXJ7 453 aa18.05■□□□□ 0.48
LRRC47-201ENST00000378251 RNF26Q9BY78 433 aaPredicted RBP18.05■□□□□ 0.48
LRRC47-201ENST00000378251 NOP56O00567 594 aaKnown RBP18.05■□□□□ 0.48
LRRC47-201ENST00000378251 CUL4AQ13619 759 aa18.05■□□□□ 0.48
LRRC47-201ENST00000378251 PAF1Q8N7H5 531 aa18.05■□□□□ 0.48
LRRC47-201ENST00000378251 PUF60Q9UHX1 559 aaKnown RBP18.05■□□□□ 0.48
LRRC47-201ENST00000378251 IFNAR1P17181 557 aa18.05■□□□□ 0.48
LRRC47-201ENST00000378251 ARID5AQ03989 594 aa18.05■□□□□ 0.48
LRRC47-201ENST00000378251 TOB2Q14106 344 aaPredicted RBP18.05■□□□□ 0.48
LRRC47-201ENST00000378251 PRIMPOLQ96LW4 560 aa18.05■□□□□ 0.48
LRRC47-201ENST00000378251 HERC4Q5GLZ8 1057 aaPredicted RBP18.04■□□□□ 0.48
LRRC47-201ENST00000378251 NCAPG2Q86XI2 1143 aa18.04■□□□□ 0.48
LRRC47-201ENST00000378251 FAM114A1Q8IWE2 563 aa18.04■□□□□ 0.48
LRRC47-201ENST00000378251 C16orf45Q96MC5 204 aaPredicted RBP18.04■□□□□ 0.48
LRRC47-201ENST00000378251 CCDC181Q5TID7 509 aa18.04■□□□□ 0.48
LRRC47-201ENST00000378251 IFNKQ9P0W0 207 aa18.04■□□□□ 0.48
LRRC47-201ENST00000378251 NR1I2O75469 434 aa18.04■□□□□ 0.48
LRRC47-201ENST00000378251 PTGS1P23219 599 aa18.04■□□□□ 0.48
LRRC47-201ENST00000378251 CDC25AP30304 524 aa18.04■□□□□ 0.48
LRRC47-201ENST00000378251 TPH2Q8IWU9 490 aa18.04■□□□□ 0.48
LRRC47-201ENST00000378251 TTC12Q9H892 705 aaPredicted RBP18.04■□□□□ 0.48
LRRC47-201ENST00000378251 PCDHA12Q9UN75 941 aa18.04■□□□□ 0.48
LRRC47-201ENST00000378251 KIF20BQ96Q89 1820 aa18.04■□□□□ 0.48
LRRC47-201ENST00000378251 PLEKHG2Q9H7P9 1386 aa18.04■□□□□ 0.48
LRRC47-201ENST00000378251 CCDC169A6NNP5 214 aa18.04■□□□□ 0.48
LRRC47-201ENST00000378251 TRAF5O00463 557 aa18.04■□□□□ 0.48
LRRC47-201ENST00000378251 STOX1Q6ZVD7 989 aa18.04■□□□□ 0.48
LRRC47-201ENST00000378251 ZNF341Q9BYN7 854 aa18.04■□□□□ 0.48
LRRC47-201ENST00000378251 TAF6LQ9Y6J9 622 aa18.04■□□□□ 0.48
LRRC47-201ENST00000378251 TNS2Q63HR2 1409 aa18.03■□□□□ 0.48
LRRC47-201ENST00000378251 TNNT1P13805 278 aa18.03■□□□□ 0.48
LRRC47-201ENST00000378251 HAUS3Q68CZ6 603 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms