RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 A0A1W2PQD8 194 aa16.75■□□□□ 0.27
NPHP4-201ENST00000378156 RESTQ13127 1097 aa16.75■□□□□ 0.27
NPHP4-201ENST00000378156 CCDC6Q16204 474 aa16.75■□□□□ 0.27
NPHP4-201ENST00000378156 DOK7Q18PE1 504 aa16.75■□□□□ 0.27
NPHP4-201ENST00000378156 HERC4Q5GLZ8 1057 aaPredicted RBP16.75■□□□□ 0.27
NPHP4-201ENST00000378156 CNKSR1Q969H4 720 aa16.75■□□□□ 0.27
NPHP4-201ENST00000378156 SEMA3EO15041 775 aa16.75■□□□□ 0.27
NPHP4-201ENST00000378156 CETN3O15182 167 aa16.75■□□□□ 0.27
NPHP4-201ENST00000378156 KCNQ4P56696 695 aa16.75■□□□□ 0.27
NPHP4-201ENST00000378156 DPCR1Q3MIW9 517 aa16.75■□□□□ 0.27
NPHP4-201ENST00000378156 NCAPH2Q6IBW4 605 aa16.75■□□□□ 0.27
NPHP4-201ENST00000378156 ATP8A2Q9NTI2 1148 aa16.75■□□□□ 0.27
NPHP4-201ENST00000378156 AXIN2Q9Y2T1 843 aa16.75■□□□□ 0.27
NPHP4-201ENST00000378156 PPRC1Q5VV67 1664 aaKnown RBP16.75■□□□□ 0.27
NPHP4-201ENST00000378156 EPB41P11171 864 aaKnown RBP16.75■□□□□ 0.27
NPHP4-201ENST00000378156 BTDP43251 543 aa16.75■□□□□ 0.27
NPHP4-201ENST00000378156 RAPGEF1Q13905 1077 aa16.75■□□□□ 0.27
NPHP4-201ENST00000378156 NSMFQ6X4W1 530 aa16.75■□□□□ 0.27
NPHP4-201ENST00000378156 TMEM87AQ8NBN3 555 aa16.75■□□□□ 0.27
NPHP4-201ENST00000378156 CACTINQ8WUQ7 758 aaKnown RBP16.75■□□□□ 0.27
NPHP4-201ENST00000378156 TTC14Q96N46 770 aa16.75■□□□□ 0.27
NPHP4-201ENST00000378156 FERMT1Q9BQL6 677 aa16.75■□□□□ 0.27
NPHP4-201ENST00000378156 PUS7LQ9H0K6 701 aaKnown RBP16.75■□□□□ 0.27
NPHP4-201ENST00000378156 GPHNQ9NQX3 736 aaPredicted RBP16.75■□□□□ 0.27
NPHP4-201ENST00000378156 XDHP47989 1333 aa16.74■□□□□ 0.27
NPHP4-201ENST00000378156 ARHGEF35A5YM69 484 aa16.74■□□□□ 0.27
NPHP4-201ENST00000378156 RBM6P78332 1123 aaKnown RBP16.74■□□□□ 0.27
NPHP4-201ENST00000378156 APOA5Q6Q788 366 aa16.74■□□□□ 0.27
NPHP4-201ENST00000378156 KRBA2Q6ZNG9 492 aa16.74■□□□□ 0.27
NPHP4-201ENST00000378156 IQSEC2Q5JU85 1478 aa16.74■□□□□ 0.27
NPHP4-201ENST00000378156 LMTK2Q8IWU2 1503 aa16.74■□□□□ 0.27
NPHP4-201ENST00000378156 ARHGEF40Q8TER5 1519 aa16.74■□□□□ 0.27
NPHP4-201ENST00000378156 PCP11498 1178 aaKnown RBP16.74■□□□□ 0.27
NPHP4-201ENST00000378156 SCNN1DP51172 638 aa16.74■□□□□ 0.27
NPHP4-201ENST00000378156 GABPB1Q06547 395 aaPredicted RBP16.74■□□□□ 0.27
NPHP4-201ENST00000378156 CLEC17AQ6ZS10 378 aa16.74■□□□□ 0.27
NPHP4-201ENST00000378156 RGS22Q8NE09 1264 aa16.74■□□□□ 0.27
NPHP4-201ENST00000378156 CCDC77Q9BR77 488 aa16.74■□□□□ 0.27
NPHP4-201ENST00000378156 SMTNP53814 917 aa16.74■□□□□ 0.27
NPHP4-201ENST00000378156 KIAA1524Q8TCG1 905 aa16.74■□□□□ 0.27
NPHP4-201ENST00000378156 NAPGQ99747 312 aaPredicted RBP16.74■□□□□ 0.27
NPHP4-201ENST00000378156 HOMER2Q9NSB8 354 aa16.74■□□□□ 0.27
NPHP4-201ENST00000378156 DNM3Q9UQ16 869 aa16.74■□□□□ 0.27
NPHP4-201ENST00000378156 ZBED4O75132 1171 aa16.74■□□□□ 0.27
NPHP4-201ENST00000378156 TOB2Q14106 344 aaPredicted RBP16.74■□□□□ 0.27
NPHP4-201ENST00000378156 CYP26C1Q6V0L0 522 aa16.74■□□□□ 0.27
NPHP4-201ENST00000378156 FMNL3Q8IVF7 1028 aa16.74■□□□□ 0.27
NPHP4-201ENST00000378156 STK24Q9Y6E0 443 aa16.74■□□□□ 0.27
NPHP4-201ENST00000378156 MYCLP12524 364 aaPredicted RBP16.73■□□□□ 0.27
NPHP4-201ENST00000378156 CABP7Q86V35 215 aa16.73■□□□□ 0.27
NPHP4-201ENST00000378156 KLRF2D3W0D1 207 aa16.73■□□□□ 0.27
NPHP4-201ENST00000378156 ECM2O94769 699 aaPredicted RBP16.73■□□□□ 0.27
NPHP4-201ENST00000378156 SLC39A14Q15043 492 aa16.73■□□□□ 0.27
NPHP4-201ENST00000378156 GPIHBP1Q8IV16 184 aa16.73■□□□□ 0.27
NPHP4-201ENST00000378156 CHURC1Q8WUH1 139 aa16.73■□□□□ 0.27
NPHP4-201ENST00000378156 DESI2Q9BSY9 194 aa16.73■□□□□ 0.27
NPHP4-201ENST00000378156 PCDHA5Q9Y5H7 936 aa16.73■□□□□ 0.27
NPHP4-201ENST00000378156 TRIM37O94972 964 aa16.73■□□□□ 0.27
NPHP4-201ENST00000378156 SERPINB2P05120 415 aa16.73■□□□□ 0.27
NPHP4-201ENST00000378156 ERCC6LQ2NKX8 1250 aa16.73■□□□□ 0.27
NPHP4-201ENST00000378156 BLIDQ8IZY5 108 aa16.73■□□□□ 0.27
NPHP4-201ENST00000378156 MED23Q9ULK4 1368 aa16.73■□□□□ 0.27
NPHP4-201ENST00000378156 DKC1O60832 514 aaKnown RBP eCLIP16.72■□□□□ 0.271e-6■■■■■ 42.6
NPHP4-201ENST00000378156 ERCC3P19447 782 aa16.72■□□□□ 0.27
NPHP4-201ENST00000378156 TRIM14Q14142 442 aa16.72■□□□□ 0.27
NPHP4-201ENST00000378156 ERFEQ4G0M1 354 aa16.72■□□□□ 0.27
NPHP4-201ENST00000378156 HDXQ7Z353 690 aa16.72■□□□□ 0.27
NPHP4-201ENST00000378156 LINC00301Q8NCQ3 95 aa16.72■□□□□ 0.27
NPHP4-201ENST00000378156 RASAL2Q9UJF2 1139 aa16.72■□□□□ 0.27
NPHP4-201ENST00000378156 PTPRMP28827 1452 aa16.72■□□□□ 0.27
NPHP4-201ENST00000378156 CCDC169A6NNP5 214 aa16.72■□□□□ 0.27
NPHP4-201ENST00000378156 ATP2C2O75185 946 aa16.72■□□□□ 0.27
NPHP4-201ENST00000378156 DYMQ7RTS9 669 aa16.72■□□□□ 0.27
NPHP4-201ENST00000378156 NELFBQ8WX92 580 aa16.72■□□□□ 0.27
NPHP4-201ENST00000378156 KIF4AO95239 1232 aa16.72■□□□□ 0.27
NPHP4-201ENST00000378156 TNFAIP1Q13829 316 aa16.72■□□□□ 0.27
NPHP4-201ENST00000378156 SLF1Q9BQI6 1058 aa16.72■□□□□ 0.27
NPHP4-201ENST00000378156 H7C1W4 665 aa16.72■□□□□ 0.27
NPHP4-201ENST00000378156 PRKG1Q13976 671 aa16.72■□□□□ 0.27
NPHP4-201ENST00000378156 TMTC1Q8IUR5 882 aa16.71■□□□□ 0.27
NPHP4-201ENST00000378156 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.71■□□□□ 0.27
NPHP4-201ENST00000378156 POLR3EQ9NVU0 708 aa16.71■□□□□ 0.27
NPHP4-201ENST00000378156 BIN2Q9UBW5 565 aaPredicted RBP16.71■□□□□ 0.27
NPHP4-201ENST00000378156 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.71■□□□□ 0.27
NPHP4-201ENST00000378156 H7C1D1 291 aa16.71■□□□□ 0.27
NPHP4-201ENST00000378156 BBOX1O75936 387 aa16.71■□□□□ 0.27
NPHP4-201ENST00000378156 THRAP3Q9Y2W1 955 aaKnown RBP16.71■□□□□ 0.27
NPHP4-201ENST00000378156 IKBKGQ9Y6K9 419 aa16.71■□□□□ 0.27
NPHP4-201ENST00000378156 SCG2P13521 617 aa16.71■□□□□ 0.27
NPHP4-201ENST00000378156 FNBP1Q96RU3 617 aa16.71■□□□□ 0.27
NPHP4-201ENST00000378156 CRB1P82279 1406 aa16.71■□□□□ 0.27
NPHP4-201ENST00000378156 ADGRL3Q9HAR2 1447 aa16.71■□□□□ 0.27
NPHP4-201ENST00000378156 A0A1W2PRG0 241 aa16.71■□□□□ 0.27
NPHP4-201ENST00000378156 A6NNZ2 444 aa16.71■□□□□ 0.27
NPHP4-201ENST00000378156 ADD2P35612 726 aa16.71■□□□□ 0.27
NPHP4-201ENST00000378156 KIF23Q02241 960 aaPredicted RBP16.71■□□□□ 0.27
NPHP4-201ENST00000378156 TUBB8Q3ZCM7 444 aa16.71■□□□□ 0.27
NPHP4-201ENST00000378156 UIMC1Q96RL1 719 aa16.71■□□□□ 0.27
NPHP4-201ENST00000378156 CYP2E1P05181 493 aaPredicted RBP16.7■□□□□ 0.26
NPHP4-201ENST00000378156 TUBB2AQ13885 445 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms