RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 SLC3A2P08195 630 aaKnown RBP20.07■□□□□ 0.8
HMGN4-201ENST00000377575 MAPK4P31152 587 aa20.07■□□□□ 0.8
HMGN4-201ENST00000377575 LBX2Q6XYB7 198 aa20.07■□□□□ 0.8
HMGN4-201ENST00000377575 CCAR1Q8IX12 1150 aaKnown RBP20.07■□□□□ 0.8
HMGN4-201ENST00000377575 PXYLP1Q8TE99 480 aa20.07■□□□□ 0.8
HMGN4-201ENST00000377575 TANGO6Q9C0B7 1094 aa20.07■□□□□ 0.8
HMGN4-201ENST00000377575 VCPKMTQ9H867 229 aa20.07■□□□□ 0.8
HMGN4-201ENST00000377575 HELLSQ9NRZ9 838 aa20.07■□□□□ 0.8
HMGN4-201ENST00000377575 RBPJLQ9UBG7 517 aa20.07■□□□□ 0.8
HMGN4-201ENST00000377575 RABGAP1Q9Y3P9 1069 aa20.07■□□□□ 0.8
HMGN4-201ENST00000377575 RLFQ13129 1914 aa20.07■□□□□ 0.8
HMGN4-201ENST00000377575 RASA1P20936 1047 aa20.06■□□□□ 0.8
HMGN4-201ENST00000377575 CCNA1P78396 465 aa20.06■□□□□ 0.8
HMGN4-201ENST00000377575 ATP2B2Q01814 1243 aa20.06■□□□□ 0.8
HMGN4-201ENST00000377575 STK11IPQ8N1F8 1099 aa20.06■□□□□ 0.8
HMGN4-201ENST00000377575 OSBPL3Q9H4L5 887 aa20.06■□□□□ 0.8
HMGN4-201ENST00000377575 PDE4DIPQ5VU43 2346 aa20.05■□□□□ 0.8
HMGN4-201ENST00000377575 SPDYE16A6NNV3 312 aaPredicted RBP20.05■□□□□ 0.8
HMGN4-201ENST00000377575 EEF2P13639 858 aaKnown RBP20.05■□□□□ 0.8
HMGN4-201ENST00000377575 IRX6P78412 446 aaPredicted RBP20.05■□□□□ 0.8
HMGN4-201ENST00000377575 PDE4BQ07343 736 aa20.05■□□□□ 0.8
HMGN4-201ENST00000377575 CCDC129Q6ZRS4 1044 aa20.05■□□□□ 0.8
HMGN4-201ENST00000377575 PLEKHM2Q8IWE5 1019 aa20.05■□□□□ 0.8
HMGN4-201ENST00000377575 SOCS4Q8WXH5 440 aa20.05■□□□□ 0.8
HMGN4-201ENST00000377575 RILPL2Q969X0 211 aa20.05■□□□□ 0.8
HMGN4-201ENST00000377575 CWC22Q9HCG8 908 aaKnown RBP20.05■□□□□ 0.8
HMGN4-201ENST00000377575 GOPCQ9HD26 462 aa20.05■□□□□ 0.8
HMGN4-201ENST00000377575 WDR46O15213 610 aaKnown RBP20.04■□□□□ 0.8
HMGN4-201ENST00000377575 PPARAQ07869 468 aa20.04■□□□□ 0.8
HMGN4-201ENST00000377575 SIAH1Q8IUQ4 282 aa20.04■□□□□ 0.8
HMGN4-201ENST00000377575 ZNF444Q8N0Y2 327 aaPredicted RBP20.04■□□□□ 0.8
HMGN4-201ENST00000377575 PEX10O60683 326 aa20.03■□□□□ 0.8
HMGN4-201ENST00000377575 INHAP05111 366 aa20.03■□□□□ 0.8
HMGN4-201ENST00000377575 ELNP15502 786 aa20.03■□□□□ 0.8
HMGN4-201ENST00000377575 EN2P19622 333 aaPredicted RBP20.03■□□□□ 0.8
HMGN4-201ENST00000377575 COG2Q14746 738 aa20.03■□□□□ 0.8
HMGN4-201ENST00000377575 MTFR1Q15390 333 aa20.03■□□□□ 0.8
HMGN4-201ENST00000377575 MCMDC2Q4G0Z9 681 aa20.03■□□□□ 0.8
HMGN4-201ENST00000377575 SPICE1Q8N0Z3 855 aa20.03■□□□□ 0.8
HMGN4-201ENST00000377575 NUDT12Q9BQG2 462 aa20.03■□□□□ 0.8
HMGN4-201ENST00000377575 HOXC10Q9NYD6 342 aa20.03■□□□□ 0.8
HMGN4-201ENST00000377575 COL11A1P12107 1806 aaPredicted RBP20.03■□□□□ 0.8
HMGN4-201ENST00000377575 PLIN4Q96Q06 1357 aa20.03■□□□□ 0.8
HMGN4-201ENST00000377575 A0A0D9SFI3 127 aa20.02■□□□□ 0.8
HMGN4-201ENST00000377575 CNMDO75829 334 aa20.02■□□□□ 0.8
HMGN4-201ENST00000377575 FLOT1O75955 427 aa20.02■□□□□ 0.8
HMGN4-201ENST00000377575 CCL5P13501 91 aa20.02■□□□□ 0.8
HMGN4-201ENST00000377575 Q3C1V9 767 aa20.02■□□□□ 0.8
HMGN4-201ENST00000377575 KIAA1755Q5JYT7 1200 aa20.02■□□□□ 0.8
HMGN4-201ENST00000377575 POTEEQ6S8J3 1075 aa20.02■□□□□ 0.8
HMGN4-201ENST00000377575 GPR142Q7Z601 462 aa20.02■□□□□ 0.8
HMGN4-201ENST00000377575 NKX2-3Q8TAU0 364 aa20.02■□□□□ 0.8
HMGN4-201ENST00000377575 FAM227BQ96M60 508 aa20.02■□□□□ 0.8
HMGN4-201ENST00000377575 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.02■□□□□ 0.8
HMGN4-201ENST00000377575 PORCNQ9H237 461 aa20.02■□□□□ 0.8
HMGN4-201ENST00000377575 GJD2Q9UKL4 321 aa20.02■□□□□ 0.8
HMGN4-201ENST00000377575 ZNF236Q9UL36 1845 aa20.02■□□□□ 0.79
HMGN4-201ENST00000377575 PRDM1O75626 825 aa20.01■□□□□ 0.79
HMGN4-201ENST00000377575 HMGCRP04035 888 aa20.01■□□□□ 0.79
HMGN4-201ENST00000377575 MFAP1P55081 439 aaKnown RBP20.01■□□□□ 0.79
HMGN4-201ENST00000377575 PLEKHH3Q7Z736 793 aa20.01■□□□□ 0.79
HMGN4-201ENST00000377575 MB21D1Q8N884 522 aa20.01■□□□□ 0.79
HMGN4-201ENST00000377575 RNF208Q9H0X6 261 aa20.01■□□□□ 0.79
HMGN4-201ENST00000377575 NYAP2Q9P242 653 aa20.01■□□□□ 0.79
HMGN4-201ENST00000377575 MKI67P46013 3256 aaKnown RBP20.01■□□□□ 0.79
HMGN4-201ENST00000377575 LAMA4Q16363 1823 aa20■□□□□ 0.79
HMGN4-201ENST00000377575 FOXP2O15409 715 aa20■□□□□ 0.79
HMGN4-201ENST00000377575 RAD21O60216 631 aa20■□□□□ 0.79
HMGN4-201ENST00000377575 TSPY3P0CV98 308 aa20■□□□□ 0.79
HMGN4-201ENST00000377575 TSPY8P0CW00 308 aa20■□□□□ 0.79
HMGN4-201ENST00000377575 NMIQ13287 307 aaPredicted RBP20■□□□□ 0.79
HMGN4-201ENST00000377575 WDR78Q5VTH9 848 aa20■□□□□ 0.79
HMGN4-201ENST00000377575 BTBD7Q9P203 1132 aa20■□□□□ 0.79
HMGN4-201ENST00000377575 ZMYM6O95789 1325 aa20■□□□□ 0.79
HMGN4-201ENST00000377575 CCDC171Q6TFL3 1326 aa20■□□□□ 0.79
HMGN4-201ENST00000377575 IGKV6D-41A0A0C4DH26 115 aa19.99■□□□□ 0.79
HMGN4-201ENST00000377575 HIP1O00291 1037 aa19.99■□□□□ 0.79
HMGN4-201ENST00000377575 GJB1P08034 283 aa19.99■□□□□ 0.79
HMGN4-201ENST00000377575 XRCC5P13010 732 aaKnown RBP19.99■□□□□ 0.79
HMGN4-201ENST00000377575 DSG3P32926 999 aa19.99■□□□□ 0.79
HMGN4-201ENST00000377575 RGS2P41220 211 aa19.99■□□□□ 0.79
HMGN4-201ENST00000377575 ALX1Q15699 326 aa19.99■□□□□ 0.79
HMGN4-201ENST00000377575 VPS53Q5VIR6 699 aa19.99■□□□□ 0.79
HMGN4-201ENST00000377575 TRMT44Q8IYL2 757 aaKnown RBP19.99■□□□□ 0.79
HMGN4-201ENST00000377575 SYNPO2Q9UMS6 1093 aa19.99■□□□□ 0.79
HMGN4-201ENST00000377575 IVNS1ABPQ9Y6Y0 642 aa19.99■□□□□ 0.79
HMGN4-201ENST00000377575 TTLL1O95922 423 aa19.98■□□□□ 0.79
HMGN4-201ENST00000377575 SDSP20132 328 aa19.98■□□□□ 0.79
HMGN4-201ENST00000377575 CYP2B6P20813 491 aa19.98■□□□□ 0.79
HMGN4-201ENST00000377575 GJA8P48165 433 aa19.98■□□□□ 0.79
HMGN4-201ENST00000377575 PPP4R3BQ5MIZ7 849 aa19.98■□□□□ 0.79
HMGN4-201ENST00000377575 MORN1Q5T089 497 aa19.98■□□□□ 0.79
HMGN4-201ENST00000377575 CEP95Q96GE4 821 aa19.98■□□□□ 0.79
HMGN4-201ENST00000377575 APBA2Q99767 749 aa19.98■□□□□ 0.79
HMGN4-201ENST00000377575 UNC93B1Q9H1C4 597 aa19.98■□□□□ 0.79
HMGN4-201ENST00000377575 DIAPH3Q9NSV4 1193 aa19.98■□□□□ 0.79
HMGN4-201ENST00000377575 ANAPC4Q9UJX5 808 aa19.98■□□□□ 0.79
HMGN4-201ENST00000377575 ZKSCAN1P17029 563 aaPredicted RBP19.97■□□□□ 0.79
HMGN4-201ENST00000377575 KCNA4P22459 653 aa19.97■□□□□ 0.79
HMGN4-201ENST00000377575 ZNF589Q86UQ0 364 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms