RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 PAGR1Q9BTK6 254 aa26.27■■□□□ 1.8
SRM-201ENST00000376957 CCDC171Q6TFL3 1326 aa26.27■■□□□ 1.8
SRM-201ENST00000376957 A0A0D9SFI3 127 aa26.26■■□□□ 1.79
SRM-201ENST00000376957 SMIM22K7EJ46 135 aa26.26■■□□□ 1.79
SRM-201ENST00000376957 ERVK-9P63128 1117 aa26.26■■□□□ 1.79
SRM-201ENST00000376957 ERVK-24P63145 666 aa26.26■■□□□ 1.79
SRM-201ENST00000376957 UBXN2AP68543 259 aa26.26■■□□□ 1.79
SRM-201ENST00000376957 PRKCZQ05513 592 aa26.26■■□□□ 1.79
SRM-201ENST00000376957 SLAIN1Q8ND83 568 aa26.26■■□□□ 1.79
SRM-201ENST00000376957 WDR46O15213 610 aaKnown RBP26.25■■□□□ 1.79
SRM-201ENST00000376957 FLT3LGP49771 235 aa26.25■■□□□ 1.79
SRM-201ENST00000376957 LBX2Q6XYB7 198 aa26.25■■□□□ 1.79
SRM-201ENST00000376957 ZNF333Q96JL9 665 aa26.25■■□□□ 1.79
SRM-201ENST00000376957 NYAP2Q9P242 653 aa26.25■■□□□ 1.79
SRM-201ENST00000376957 RBPJLQ9UBG7 517 aa26.25■■□□□ 1.79
SRM-201ENST00000376957 PRDM1O75626 825 aa26.24■■□□□ 1.79
SRM-201ENST00000376957 IRF5Q13568 498 aa26.24■■□□□ 1.79
SRM-201ENST00000376957 CWC27Q6UX04 472 aaKnown RBP26.24■■□□□ 1.79
SRM-201ENST00000376957 MB21D1Q8N884 522 aa26.24■■□□□ 1.79
SRM-201ENST00000376957 SYNPO2Q9UMS6 1093 aa26.24■■□□□ 1.79
SRM-201ENST00000376957 ZSWIM8A7E2V4 1837 aa26.23■■□□□ 1.79
SRM-201ENST00000376957 FLOT1O75955 427 aa26.23■■□□□ 1.79
SRM-201ENST00000376957 HSPD1P10809 573 aaKnown RBP26.23■■□□□ 1.79
SRM-201ENST00000376957 TTC22Q5TAA0 569 aa26.23■■□□□ 1.79
SRM-201ENST00000376957 CLEC10AQ8IUN9 316 aa26.23■■□□□ 1.79
SRM-201ENST00000376957 SIAH1Q8IUQ4 282 aa26.23■■□□□ 1.79
SRM-201ENST00000376957 SPICE1Q8N0Z3 855 aa26.23■■□□□ 1.79
SRM-201ENST00000376957 PXYLP1Q8TE99 480 aa26.23■■□□□ 1.79
SRM-201ENST00000376957 ANAPC4Q9UJX5 808 aa26.23■■□□□ 1.79
SRM-201ENST00000376957 ZMYM6O95789 1325 aa26.22■■□□□ 1.79
SRM-201ENST00000376957 TSPY2A6NKD2 308 aa26.22■■□□□ 1.79
SRM-201ENST00000376957 ADCY3O60266 1144 aa26.22■■□□□ 1.79
SRM-201ENST00000376957 TTLL1O95922 423 aa26.22■■□□□ 1.79
SRM-201ENST00000376957 TFAP4Q01664 338 aa26.22■■□□□ 1.79
SRM-201ENST00000376957 VPS53Q5VIR6 699 aa26.22■■□□□ 1.79
SRM-201ENST00000376957 NEDD1Q8NHV4 660 aa26.22■■□□□ 1.79
SRM-201ENST00000376957 SH3TC2Q8TF17 1288 aa26.22■■□□□ 1.79
SRM-201ENST00000376957 RUFY2Q8WXA3 655 aa26.22■■□□□ 1.79
SRM-201ENST00000376957 SOCS4Q8WXH5 440 aa26.22■■□□□ 1.79
SRM-201ENST00000376957 CLIP2Q9UDT6 1046 aa26.22■■□□□ 1.79
SRM-201ENST00000376957 FGAP02671 866 aa26.21■■□□□ 1.79
SRM-201ENST00000376957 PCP11498 1178 aaKnown RBP26.21■■□□□ 1.79
SRM-201ENST00000376957 NUDT12Q9BQG2 462 aa26.21■■□□□ 1.79
SRM-201ENST00000376957 TXNRD2Q9NNW7 524 aa26.21■■□□□ 1.79
SRM-201ENST00000376957 TOMM22Q9NS69 142 aa26.21■■□□□ 1.79
SRM-201ENST00000376957 GABRQQ9UN88 632 aa26.21■■□□□ 1.79
SRM-201ENST00000376957 SPDYE16A6NNV3 312 aaPredicted RBP26.2■■□□□ 1.78
SRM-201ENST00000376957 PDE4AP27815 886 aa26.2■■□□□ 1.78
SRM-201ENST00000376957 MTMR4Q9NYA4 1195 aa26.2■■□□□ 1.78
SRM-201ENST00000376957 IVNS1ABPQ9Y6Y0 642 aa26.2■■□□□ 1.78
SRM-201ENST00000376957 NEFLP07196 543 aa26.19■■□□□ 1.78
SRM-201ENST00000376957 CTDSPL2Q05D32 466 aa26.19■■□□□ 1.78
SRM-201ENST00000376957 WDR78Q5VTH9 848 aa26.19■■□□□ 1.78
SRM-201ENST00000376957 CENPQQ7L2Z9 268 aaPredicted RBP26.19■■□□□ 1.78
SRM-201ENST00000376957 ZNF589Q86UQ0 364 aaPredicted RBP26.19■■□□□ 1.78
SRM-201ENST00000376957 CEP95Q96GE4 821 aa26.19■■□□□ 1.78
SRM-201ENST00000376957 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.19■■□□□ 1.78
SRM-201ENST00000376957 RNF41Q9H4P4 317 aaPredicted RBP26.19■■□□□ 1.78
SRM-201ENST00000376957 CTNNA3Q9UI47 895 aa26.19■■□□□ 1.78
SRM-201ENST00000376957 RANBP6O60518 1105 aaKnown RBP26.18■■□□□ 1.78
SRM-201ENST00000376957 DSG3P32926 999 aa26.18■■□□□ 1.78
SRM-201ENST00000376957 Q3C1V9 767 aa26.18■■□□□ 1.78
SRM-201ENST00000376957 PLEKHH3Q7Z736 793 aa26.18■■□□□ 1.78
SRM-201ENST00000376957 TRMT44Q8IYL2 757 aaKnown RBP26.18■■□□□ 1.78
SRM-201ENST00000376957 NKX2-3Q8TAU0 364 aa26.18■■□□□ 1.78
SRM-201ENST00000376957 MKL1Q969V6 931 aa26.18■■□□□ 1.78
SRM-201ENST00000376957 PLIN4Q96Q06 1357 aa26.18■■□□□ 1.78
SRM-201ENST00000376957 F5H6K3 240 aa26.17■■□□□ 1.78
SRM-201ENST00000376957 ZNF213O14771 459 aa26.17■■□□□ 1.78
SRM-201ENST00000376957 FOXP2O15409 715 aa26.17■■□□□ 1.78
SRM-201ENST00000376957 ORC4O43929 436 aa26.17■■□□□ 1.78
SRM-201ENST00000376957 NT5C2P49902 561 aa26.17■■□□□ 1.78
SRM-201ENST00000376957 KLRC3Q07444 240 aa26.17■■□□□ 1.78
SRM-201ENST00000376957 FAM47AQ5JRC9 791 aa26.17■■□□□ 1.78
SRM-201ENST00000376957 SAMD1Q6SPF0 538 aaPredicted RBP26.17■■□□□ 1.78
SRM-201ENST00000376957 MFSD6Q6ZSS7 791 aa26.17■■□□□ 1.78
SRM-201ENST00000376957 GREB1LQ9C091 1923 aaPredicted RBP26.16■■□□□ 1.78
SRM-201ENST00000376957 IGKV6D-41A0A0C4DH26 115 aa26.16■■□□□ 1.78
SRM-201ENST00000376957 MYCP01106 439 aaPredicted RBP26.16■■□□□ 1.78
SRM-201ENST00000376957 PLS1Q14651 629 aa26.16■■□□□ 1.78
SRM-201ENST00000376957 GPR142Q7Z601 462 aa26.16■■□□□ 1.78
SRM-201ENST00000376957 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.16■■□□□ 1.78
SRM-201ENST00000376957 CTDP1Q9Y5B0 961 aaPredicted RBP26.16■■□□□ 1.78
SRM-201ENST00000376957 RGS2P41220 211 aa26.15■■□□□ 1.78
SRM-201ENST00000376957 KIAA1755Q5JYT7 1200 aa26.15■■□□□ 1.78
SRM-201ENST00000376957 DSCC1Q9BVC3 393 aa26.15■■□□□ 1.78
SRM-201ENST00000376957 STX8Q9UNK0 236 aa26.15■■□□□ 1.78
SRM-201ENST00000376957 RAD50Q92878 1312 aa26.14■■□□□ 1.78
SRM-201ENST00000376957 XRCC5P13010 732 aaKnown RBP26.14■■□□□ 1.78
SRM-201ENST00000376957 RRP12Q5JTH9 1297 aaKnown RBP26.14■■□□□ 1.78
SRM-201ENST00000376957 FAM83BQ5T0W9 1011 aa26.14■■□□□ 1.78
SRM-201ENST00000376957 GMCL1P1Q8NEA9 526 aa26.14■■□□□ 1.78
SRM-201ENST00000376957 RNF208Q9H0X6 261 aa26.14■■□□□ 1.78
SRM-201ENST00000376957 PORCNQ9H237 461 aa26.14■■□□□ 1.78
SRM-201ENST00000376957 BTBD7Q9P203 1132 aa26.14■■□□□ 1.78
SRM-201ENST00000376957 GJD2Q9UKL4 321 aa26.14■■□□□ 1.78
SRM-201ENST00000376957 MYH4Q9Y623 1939 aa26.14■■□□□ 1.77
SRM-201ENST00000376957 STRNO43815 780 aa26.13■■□□□ 1.77
SRM-201ENST00000376957 CNMDO75829 334 aa26.13■■□□□ 1.77
SRM-201ENST00000376957 HMGCRP04035 888 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms