RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 IFNAR1P17181 557 aa12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 GTF2A1P52655 376 aaPredicted RBP12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 CORO7P57737 925 aa12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 SAFBQ15424 915 aaKnown RBP eCLIP12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 CHRNA2Q15822 529 aa12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 RILPL1Q5EBL4 403 aa12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 ICE2Q659A1 982 aa12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 MSL3Q8N5Y2 521 aaKnown RBP12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 CAPZA3Q96KX2 299 aa12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 RABEP2Q9H5N1 569 aa12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 TOMM22Q9NS69 142 aa12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 GEMIN8Q9NWZ8 242 aaKnown RBP12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 DNAJC21Q5F1R6 531 aaKnown RBP12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 KRT28Q7Z3Y7 464 aa12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 EXOC8Q8IYI6 725 aa12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 SYMPKQ92797 1274 aaKnown RBP12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 DDX17Q92841 729 aaKnown RBP12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 NUP88Q99567 741 aaPredicted RBP12.98□□□□□ -0.33
TM9SF2-201ENST00000376387 STK36Q9NRP7 1315 aa12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 ATP1A1P05023 1023 aaKnown RBP12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 MYBL2P10244 700 aa12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 PIP4K2BP78356 416 aa12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 RIC1Q4ADV7 1423 aa12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 CNGA4Q8IV77 575 aa12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 OTUD6BQ8N6M0 293 aa12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 ZNF579Q8NAF0 562 aaKnown RBP12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 CABLES1Q8TDN4 633 aa12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 EHD4Q9H223 541 aa12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 PRKAB2O43741 272 aa12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 PDE6AP16499 860 aa12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 FECHP22830 423 aa12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 METTL24Q5JXM2 366 aa12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 CCDC97Q96F63 343 aaPredicted RBP12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 STRBPQ96SI9 672 aaKnown RBP12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 FOXP1Q9H334 677 aaPredicted RBP12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 HPCAL4Q9UM19 191 aa12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 MAPK8IP1Q9UQF2 711 aa12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 N4BP3O15049 544 aa12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 PRDM1O75626 825 aa12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 WDR93Q6P2C0 686 aa12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 GET4Q7L5D6 327 aaPredicted RBP12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 SH3RF1Q7Z6J0 888 aa12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 NUP133Q8WUM0 1156 aa12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 DRC1Q96MC2 740 aa12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 JRKLQ9Y4A0 524 aa12.97□□□□□ -0.33
TM9SF2-201ENST00000376387 TCRBV5S4A2TA0A5A2 114 aa12.96□□□□□ -0.33
TM9SF2-201ENST00000376387 SMIM22K7EJ46 135 aa12.96□□□□□ -0.33
TM9SF2-201ENST00000376387 PHKA1P46020 1223 aa12.96□□□□□ -0.33
TM9SF2-201ENST00000376387 RTN1Q16799 776 aa12.96□□□□□ -0.33
TM9SF2-201ENST00000376387 FILIP1LQ4L180 1135 aa12.96□□□□□ -0.33
TM9SF2-201ENST00000376387 TMTC1Q8IUR5 882 aa12.96□□□□□ -0.33
TM9SF2-201ENST00000376387 AFAP1L1Q8TED9 768 aa12.96□□□□□ -0.33
TM9SF2-201ENST00000376387 MKRN1Q9UHC7 482 aaKnown RBP12.96□□□□□ -0.33
TM9SF2-201ENST00000376387 KRT9P35527 623 aa12.96□□□□□ -0.33
TM9SF2-201ENST00000376387 GGCXP38435 758 aa12.96□□□□□ -0.33
TM9SF2-201ENST00000376387 USP14P54578 494 aa12.96□□□□□ -0.33
TM9SF2-201ENST00000376387 KANK3Q6NY19 840 aa12.96□□□□□ -0.33
TM9SF2-201ENST00000376387 CRACR2BQ8N4Y2 399 aaPredicted RBP12.96□□□□□ -0.33
TM9SF2-201ENST00000376387 GOLGA6L1Q8N7Z2 621 aa12.96□□□□□ -0.33
TM9SF2-201ENST00000376387 MED4Q9NPJ6 270 aa12.96□□□□□ -0.33
TM9SF2-201ENST00000376387 VPS54Q9P1Q0 977 aa12.96□□□□□ -0.33
TM9SF2-201ENST00000376387 ZNF185O15231 689 aa12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 CAPN15O75808 1086 aa12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 LIFRP42702 1097 aa12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 SART3Q15020 963 aaKnown RBP12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 TRAPPC11Q7Z392 1133 aa12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 APBB1IPQ7Z5R6 666 aaPredicted RBP12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 IFNL3Q8IZI9 196 aa12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 GBP3Q9H0R5 595 aa12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 ARMT1Q9H993 441 aa12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 TUBB2AQ13885 445 aa12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 SPTY2D1Q68D10 685 aaPredicted RBP12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 CYP26C1Q6V0L0 522 aa12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 CCDC148Q8NFR7 591 aa12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 AIDAQ96BJ3 306 aa12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 TUBB2BQ9BVA1 445 aa12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 AGPSO00116 658 aa12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 SNAP23O00161 211 aa12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 PPFIA4O75335 1185 aa12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 AARSP49588 968 aaKnown RBP eCLIP12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 IFIT5Q13325 482 aaKnown RBP12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 TRIM22Q8IYM9 498 aa12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 PROCA1Q8NCQ7 364 aaPredicted RBP12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 CTAGE1Q96RT6 745 aa12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 MTRQ99707 1265 aa12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 RIPOR2Q9Y4F9 1068 aa12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 XDHP47989 1333 aa12.95□□□□□ -0.34
TM9SF2-201ENST00000376387 CHD4Q14839 1912 aa12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 MBD4O95243 580 aa12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 COPB1P53618 953 aaKnown RBP12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 MRPS25P82663 173 aaKnown RBP12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 ZNF174Q15697 407 aa12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 WASF1Q92558 559 aa12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 BORCS6Q96GS4 357 aa12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 GREM2Q9H772 168 aa12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 AATFQ9NY61 560 aaKnown RBP eCLIP12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 ITIH6Q6UXX5 1313 aa12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 CDHR2Q9BYE9 1310 aa12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 LRP6O75581 1613 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms