RNA–Protein interactions for RNA: ENST00000374692.7

TMEM38B-202, Transcript of transmembrane protein 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-202ENST00000374692 ZHX3Q9H4I2 956 aa13.64□□□□□ -0.23
TMEM38B-202ENST00000374692 TDRD3Q9H7E2 651 aaKnown RBP13.64□□□□□ -0.23
TMEM38B-202ENST00000374692 DDX4Q9NQI0 724 aaKnown RBP13.64□□□□□ -0.23
TMEM38B-202ENST00000374692 FANCLQ9NW38 375 aa13.64□□□□□ -0.23
TMEM38B-202ENST00000374692 RTL9Q8NET4 1388 aa13.64□□□□□ -0.23
TMEM38B-202ENST00000374692 YEATS4O95619 227 aa13.64□□□□□ -0.23
TMEM38B-202ENST00000374692 C12orf60Q5U649 245 aa13.64□□□□□ -0.23
TMEM38B-202ENST00000374692 BRIP1Q9BX63 1249 aa13.64□□□□□ -0.23
TMEM38B-202ENST00000374692 DAGLAQ9Y4D2 1042 aa13.64□□□□□ -0.23
TMEM38B-202ENST00000374692 SCG2P13521 617 aa13.63□□□□□ -0.23
TMEM38B-202ENST00000374692 PKN1Q16512 942 aa13.63□□□□□ -0.23
TMEM38B-202ENST00000374692 MIGA2Q7L4E1 593 aa13.63□□□□□ -0.23
TMEM38B-202ENST00000374692 N4BP2Q86UW6 1770 aaPredicted RBP13.63□□□□□ -0.23
TMEM38B-202ENST00000374692 ATP2B4P23634 1241 aa13.63□□□□□ -0.23
TMEM38B-202ENST00000374692 TMTC3Q6ZXV5 915 aa13.63□□□□□ -0.23
TMEM38B-202ENST00000374692 FLT1P17948 1338 aa13.63□□□□□ -0.23
TMEM38B-202ENST00000374692 UBE2SQ16763 222 aa13.63□□□□□ -0.23
TMEM38B-202ENST00000374692 SOGA3Q5TF21 947 aa13.63□□□□□ -0.23
TMEM38B-202ENST00000374692 FOXP4Q8IVH2 680 aaPredicted RBP13.63□□□□□ -0.23
TMEM38B-202ENST00000374692 DPF2Q92785 391 aa13.63□□□□□ -0.23
TMEM38B-202ENST00000374692 SEC63Q9UGP8 760 aaKnown RBP13.63□□□□□ -0.23
TMEM38B-202ENST00000374692 TMEM232C9JQI7 657 aa13.62□□□□□ -0.23
TMEM38B-202ENST00000374692 H0YIN7 160 aa13.62□□□□□ -0.23
TMEM38B-202ENST00000374692 CCNT1O60563 726 aaKnown RBP13.62□□□□□ -0.23
TMEM38B-202ENST00000374692 CCT6AP40227 531 aaKnown RBP13.62□□□□□ -0.23
TMEM38B-202ENST00000374692 GSTO1P78417 241 aa13.62□□□□□ -0.23
TMEM38B-202ENST00000374692 SLC30A10Q6XR72 485 aa13.62□□□□□ -0.23
TMEM38B-202ENST00000374692 AHDC1Q5TGY3 1603 aaPredicted RBP13.62□□□□□ -0.23
TMEM38B-202ENST00000374692 FAM205AQ6ZU69 1335 aa13.62□□□□□ -0.23
TMEM38B-202ENST00000374692 PPIP5K2O43314 1243 aa13.62□□□□□ -0.23
TMEM38B-202ENST00000374692 CMA1P23946 247 aa13.62□□□□□ -0.23
TMEM38B-202ENST00000374692 KIF5BP33176 963 aa13.62□□□□□ -0.23
TMEM38B-202ENST00000374692 METTL16Q86W50 562 aaKnown RBP13.62□□□□□ -0.23
TMEM38B-202ENST00000374692 SMARCE1Q969G3 411 aa13.62□□□□□ -0.23
TMEM38B-202ENST00000374692 ZNF277Q9NRM2 450 aaPredicted RBP13.62□□□□□ -0.23
TMEM38B-202ENST00000374692 USP27XA6NNY8 438 aa13.61□□□□□ -0.23
TMEM38B-202ENST00000374692 SKILP12757 684 aa13.61□□□□□ -0.23
TMEM38B-202ENST00000374692 TXKP42681 527 aa13.61□□□□□ -0.23
TMEM38B-202ENST00000374692 RCSD1Q6JBY9 416 aa13.61□□□□□ -0.23
TMEM38B-202ENST00000374692 AKAP11Q9UKA4 1901 aa13.61□□□□□ -0.23
TMEM38B-202ENST00000374692 PARP1P09874 1014 aaKnown RBP13.61□□□□□ -0.23
TMEM38B-202ENST00000374692 RASA1P20936 1047 aa13.61□□□□□ -0.23
TMEM38B-202ENST00000374692 EVCP57679 992 aa13.61□□□□□ -0.23
TMEM38B-202ENST00000374692 TPM4P67936 248 aa13.61□□□□□ -0.23
TMEM38B-202ENST00000374692 PTPAQ15257 358 aa13.61□□□□□ -0.23
TMEM38B-202ENST00000374692 RILPL1Q5EBL4 403 aa13.61□□□□□ -0.23
TMEM38B-202ENST00000374692 DHX40Q8IX18 779 aaKnown RBP13.61□□□□□ -0.23
TMEM38B-202ENST00000374692 NLGN1Q8N2Q7 840 aa13.61□□□□□ -0.23
TMEM38B-202ENST00000374692 RTFDC1Q9BY42 306 aaPredicted RBP13.61□□□□□ -0.23
TMEM38B-202ENST00000374692 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.61□□□□□ -0.23
TMEM38B-202ENST00000374692 MYH2Q9UKX2 1941 aa13.61□□□□□ -0.23
TMEM38B-202ENST00000374692 BBOX1O75936 387 aa13.61□□□□□ -0.23
TMEM38B-202ENST00000374692 UBASH3AP57075 661 aa13.61□□□□□ -0.23
TMEM38B-202ENST00000374692 PRKG1Q13976 671 aa13.61□□□□□ -0.23
TMEM38B-202ENST00000374692 UVSSAQ2YD98 709 aa13.61□□□□□ -0.23
TMEM38B-202ENST00000374692 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.61□□□□□ -0.23
TMEM38B-202ENST00000374692 HPS3Q969F9 1004 aa13.61□□□□□ -0.23
TMEM38B-202ENST00000374692 CENPFP49454 3210 aa13.61□□□□□ -0.23
TMEM38B-202ENST00000374692 A0A087X0B3 334 aa13.6□□□□□ -0.23
TMEM38B-202ENST00000374692 ECM2O94769 699 aaPredicted RBP13.6□□□□□ -0.23
TMEM38B-202ENST00000374692 UBXN2AP68543 259 aa13.6□□□□□ -0.23
TMEM38B-202ENST00000374692 KRBA2Q6ZNG9 492 aa13.6□□□□□ -0.23
TMEM38B-202ENST00000374692 SAMSN1Q9NSI8 373 aaKnown RBP13.6□□□□□ -0.23
TMEM38B-202ENST00000374692 POSTNQ15063 836 aa13.6□□□□□ -0.23
TMEM38B-202ENST00000374692 WWC2Q6AWC2 1192 aa13.6□□□□□ -0.23
TMEM38B-202ENST00000374692 MAP3K14Q99558 947 aa13.6□□□□□ -0.23
TMEM38B-202ENST00000374692 SMCO2A6NFE2 343 aa13.6□□□□□ -0.23
TMEM38B-202ENST00000374692 CTAGE5O15320 804 aa13.6□□□□□ -0.23
TMEM38B-202ENST00000374692 CYTH3O43739 400 aa13.6□□□□□ -0.23
TMEM38B-202ENST00000374692 IQCB1Q15051 598 aa13.6□□□□□ -0.23
TMEM38B-202ENST00000374692 NFE2L3Q9Y4A8 694 aa13.6□□□□□ -0.23
TMEM38B-202ENST00000374692 PLEKHG2Q9H7P9 1386 aa13.59□□□□□ -0.23
TMEM38B-202ENST00000374692 SRGNP10124 158 aa13.59□□□□□ -0.23
TMEM38B-202ENST00000374692 PDIA4P13667 645 aaKnown RBP13.59□□□□□ -0.23
TMEM38B-202ENST00000374692 IDEP14735 1019 aa13.59□□□□□ -0.23
TMEM38B-202ENST00000374692 TECP42680 631 aa13.59□□□□□ -0.23
TMEM38B-202ENST00000374692 RBM6P78332 1123 aaKnown RBP13.59□□□□□ -0.23
TMEM38B-202ENST00000374692 SF3B2Q13435 895 aaKnown RBP13.59□□□□□ -0.23
TMEM38B-202ENST00000374692 NAA30Q147X3 362 aaPredicted RBP13.59□□□□□ -0.23
TMEM38B-202ENST00000374692 RNF26Q9BY78 433 aaPredicted RBP13.59□□□□□ -0.23
TMEM38B-202ENST00000374692 PKD2L1Q9P0L9 805 aa13.59□□□□□ -0.23
TMEM38B-202ENST00000374692 CACNB1Q02641 598 aaPredicted RBP13.59□□□□□ -0.23
TMEM38B-202ENST00000374692 FZD1Q9UP38 647 aa13.59□□□□□ -0.23
TMEM38B-202ENST00000374692 ADKP55263 362 aaKnown RBP13.59□□□□□ -0.23
TMEM38B-202ENST00000374692 CCAR2Q8N163 923 aaKnown RBP13.59□□□□□ -0.23
TMEM38B-202ENST00000374692 CNTNAP5Q8WYK1 1306 aa13.58□□□□□ -0.23
TMEM38B-202ENST00000374692 U2AF2P26368 475 aaKnown RBP eCLIP13.58□□□□□ -0.24
TMEM38B-202ENST00000374692 UBA7P41226 1012 aa13.58□□□□□ -0.24
TMEM38B-202ENST00000374692 FANCCQ00597 558 aa13.58□□□□□ -0.24
TMEM38B-202ENST00000374692 PRAMEF18Q5VWM3 479 aa13.58□□□□□ -0.24
TMEM38B-202ENST00000374692 RRAGBQ5VZM2 374 aa13.58□□□□□ -0.24
TMEM38B-202ENST00000374692 BLIDQ8IZY5 108 aa13.58□□□□□ -0.24
TMEM38B-202ENST00000374692 TEKT1Q969V4 418 aa13.58□□□□□ -0.24
TMEM38B-202ENST00000374692 TMEM60Q9H2L4 133 aa13.58□□□□□ -0.24
TMEM38B-202ENST00000374692 SEMA3EO15041 775 aa13.58□□□□□ -0.24
TMEM38B-202ENST00000374692 CUTAO60888 179 aa13.58□□□□□ -0.24
TMEM38B-202ENST00000374692 FMR1Q06787 632 aaKnown RBP eCLIP13.58□□□□□ -0.246e-7■■■■■ 38.6
TMEM38B-202ENST00000374692 CCDC178Q5BJE1 867 aa13.58□□□□□ -0.24
TMEM38B-202ENST00000374692 DYMQ7RTS9 669 aa13.58□□□□□ -0.24
TMEM38B-202ENST00000374692 LARGE2Q8N3Y3 721 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms