RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 KCNA3P22001 575 aa15.91■□□□□ 0.14
HMGCL-203ENST00000374490 ERCC5P28715 1186 aaPredicted RBP15.91■□□□□ 0.14
HMGCL-203ENST00000374490 DDR1Q08345 913 aa15.91■□□□□ 0.14
HMGCL-203ENST00000374490 C9orf131Q5VYM1 1079 aa15.91■□□□□ 0.14
HMGCL-203ENST00000374490 E4F1Q66K89 784 aaPredicted RBP15.91■□□□□ 0.14
HMGCL-203ENST00000374490 PPP1R13BQ96KQ4 1090 aa15.91■□□□□ 0.14
HMGCL-203ENST00000374490 ATP8A2Q9NTI2 1148 aa15.91■□□□□ 0.14
HMGCL-203ENST00000374490 TRMT1Q9NXH9 659 aaKnown RBP15.91■□□□□ 0.14
HMGCL-203ENST00000374490 SERTAD1Q9UHV2 236 aa15.91■□□□□ 0.14
HMGCL-203ENST00000374490 TAOK2Q9UL54 1235 aa15.91■□□□□ 0.14
HMGCL-203ENST00000374490 PCDHB6Q9Y5E3 794 aa15.91■□□□□ 0.14
HMGCL-203ENST00000374490 DLEC1Q9Y238 1755 aa15.9■□□□□ 0.14
HMGCL-203ENST00000374490 UBE2Q2LH0YL09 131 aa15.9■□□□□ 0.14
HMGCL-203ENST00000374490 POLR2DO15514 142 aaKnown RBP15.9■□□□□ 0.14
HMGCL-203ENST00000374490 ACTN4O43707 911 aaKnown RBP15.9■□□□□ 0.14
HMGCL-203ENST00000374490 ATP1A3P13637 1013 aa15.9■□□□□ 0.14
HMGCL-203ENST00000374490 GRAPQ13588 217 aa15.9■□□□□ 0.14
HMGCL-203ENST00000374490 PPP4R3BQ5MIZ7 849 aa15.9■□□□□ 0.14
HMGCL-203ENST00000374490 ISM2Q6H9L7 571 aa15.9■□□□□ 0.14
HMGCL-203ENST00000374490 FOXP4Q8IVH2 680 aaPredicted RBP15.9■□□□□ 0.14
HMGCL-203ENST00000374490 GRAPLQ8TC17 118 aaPredicted RBP15.9■□□□□ 0.14
HMGCL-203ENST00000374490 FAM84BQ96KN1 310 aaPredicted RBP15.9■□□□□ 0.14
HMGCL-203ENST00000374490 ARPP21Q9UBL0 812 aaPredicted RBP15.9■□□□□ 0.14
HMGCL-203ENST00000374490 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.9■□□□□ 0.14
HMGCL-203ENST00000374490 MAST2Q6P0Q8 1798 aa15.9■□□□□ 0.14
HMGCL-203ENST00000374490 POLRMTO00411 1230 aaKnown RBP15.9■□□□□ 0.14
HMGCL-203ENST00000374490 SLU7O95391 586 aaKnown RBP15.9■□□□□ 0.14
HMGCL-203ENST00000374490 PLCD1P51178 756 aa15.9■□□□□ 0.14
HMGCL-203ENST00000374490 FUT2Q10981 343 aa15.9■□□□□ 0.14
HMGCL-203ENST00000374490 NR5A1Q13285 461 aa15.9■□□□□ 0.14
HMGCL-203ENST00000374490 PKN1Q16512 942 aa15.9■□□□□ 0.14
HMGCL-203ENST00000374490 SBK1Q52WX2 424 aa15.9■□□□□ 0.14
HMGCL-203ENST00000374490 CTR9Q6PD62 1173 aa15.9■□□□□ 0.14
HMGCL-203ENST00000374490 TMTC3Q6ZXV5 915 aa15.9■□□□□ 0.14
HMGCL-203ENST00000374490 CTCFLQ8NI51 663 aaPredicted RBP15.9■□□□□ 0.14
HMGCL-203ENST00000374490 SPATA20Q8TB22 786 aa15.9■□□□□ 0.14
HMGCL-203ENST00000374490 TMX1Q9H3N1 280 aa15.9■□□□□ 0.14
HMGCL-203ENST00000374490 CABP5Q9NP86 173 aa15.9■□□□□ 0.14
HMGCL-203ENST00000374490 NMRK2Q9NPI5 230 aa15.9■□□□□ 0.14
HMGCL-203ENST00000374490 FANCLQ9NW38 375 aa15.9■□□□□ 0.14
HMGCL-203ENST00000374490 IQSEC3Q9UPP2 1182 aaPredicted RBP15.9■□□□□ 0.14
HMGCL-203ENST00000374490 GOLGA6L9A6NEM1 432 aa15.89■□□□□ 0.13
HMGCL-203ENST00000374490 ZSCAN12O43309 604 aa15.89■□□□□ 0.13
HMGCL-203ENST00000374490 TRAPPC10P48553 1259 aa15.89■□□□□ 0.13
HMGCL-203ENST00000374490 DYNLL1P63167 89 aaKnown RBP15.89■□□□□ 0.13
HMGCL-203ENST00000374490 SPTY2D1Q68D10 685 aaPredicted RBP15.89■□□□□ 0.13
HMGCL-203ENST00000374490 CSRNP2Q9H175 543 aa15.89■□□□□ 0.13
HMGCL-203ENST00000374490 KIF13BQ9NQT8 1826 aa15.89■□□□□ 0.13
HMGCL-203ENST00000374490 PHLPP2Q6ZVD8 1323 aa15.89■□□□□ 0.13
HMGCL-203ENST00000374490 MYH13Q9UKX3 1938 aa15.88■□□□□ 0.13
HMGCL-203ENST00000374490 CEP350Q5VT06 3117 aa15.88■□□□□ 0.13
HMGCL-203ENST00000374490 CHRNA5P30532 468 aa15.88■□□□□ 0.13
HMGCL-203ENST00000374490 TROAPQ12815 778 aa15.88■□□□□ 0.13
HMGCL-203ENST00000374490 CCDC178Q5BJE1 867 aa15.88■□□□□ 0.13
HMGCL-203ENST00000374490 CCDC82Q8N4S0 544 aa15.88■□□□□ 0.13
HMGCL-203ENST00000374490 OXER1Q8TDS5 423 aa15.88■□□□□ 0.13
HMGCL-203ENST00000374490 NSUN4Q96CB9 384 aaKnown RBP15.88■□□□□ 0.13
HMGCL-203ENST00000374490 RBM17Q96I25 401 aaKnown RBP15.88■□□□□ 0.13
HMGCL-203ENST00000374490 L2HGDHQ9H9P8 463 aa15.88■□□□□ 0.13
HMGCL-203ENST00000374490 ARHGAP6O43182 974 aa15.87■□□□□ 0.13
HMGCL-203ENST00000374490 SLFN14P0C7P3 912 aa15.87■□□□□ 0.13
HMGCL-203ENST00000374490 ZNF18P17022 549 aa15.87■□□□□ 0.13
HMGCL-203ENST00000374490 BMP6P22004 513 aa15.87■□□□□ 0.13
HMGCL-203ENST00000374490 HIBADHP31937 336 aaKnown RBP15.87■□□□□ 0.13
HMGCL-203ENST00000374490 PDE4BQ07343 736 aa15.87■□□□□ 0.13
HMGCL-203ENST00000374490 DPF2Q92785 391 aa15.87■□□□□ 0.13
HMGCL-203ENST00000374490 RNF181Q9P0P0 153 aa15.87■□□□□ 0.13
HMGCL-203ENST00000374490 VPS54Q9P1Q0 977 aa15.87■□□□□ 0.13
HMGCL-203ENST00000374490 CNTNAP5Q8WYK1 1306 aa15.87■□□□□ 0.13
HMGCL-203ENST00000374490 KIAA1551Q9HCM1 1747 aa15.87■□□□□ 0.13
HMGCL-203ENST00000374490 NRXN2Q9P2S2 1712 aa15.87■□□□□ 0.13
HMGCL-203ENST00000374490 FOXN1O15353 648 aa15.86■□□□□ 0.13
HMGCL-203ENST00000374490 CDK11BP21127 795 aaKnown RBP15.86■□□□□ 0.13
HMGCL-203ENST00000374490 KIF5BP33176 963 aa15.86■□□□□ 0.13
HMGCL-203ENST00000374490 GRIN1Q05586 938 aa15.86■□□□□ 0.13
HMGCL-203ENST00000374490 TBX2Q13207 712 aaPredicted RBP15.86■□□□□ 0.13
HMGCL-203ENST00000374490 CRY2Q49AN0 593 aa15.86■□□□□ 0.13
HMGCL-203ENST00000374490 SPECC1Q5M775 1068 aa15.86■□□□□ 0.13
HMGCL-203ENST00000374490 TTC38Q5R3I4 469 aa15.86■□□□□ 0.13
HMGCL-203ENST00000374490 CMTR1Q8N1G2 835 aaKnown RBP15.86■□□□□ 0.13
HMGCL-203ENST00000374490 ZNF397Q8NF99 534 aaPredicted RBP15.86■□□□□ 0.13
HMGCL-203ENST00000374490 RBM46Q8TBY0 533 aaKnown RBP15.86■□□□□ 0.13
HMGCL-203ENST00000374490 TNFRSF25Q93038 417 aa15.86■□□□□ 0.13
HMGCL-203ENST00000374490 NFE2L3Q9Y4A8 694 aa15.86■□□□□ 0.13
HMGCL-203ENST00000374490 V9GY48 417 aaPredicted RBP15.86■□□□□ 0.13
HMGCL-203ENST00000374490 LAMB1P07942 1786 aa15.86■□□□□ 0.13
HMGCL-203ENST00000374490 USP17L12C9JPN9 530 aa15.86■□□□□ 0.13
HMGCL-203ENST00000374490 USP17L21D6R901 530 aa15.86■□□□□ 0.13
HMGCL-203ENST00000374490 PRR29P0C7W0 189 aa15.86■□□□□ 0.13
HMGCL-203ENST00000374490 CALML3P27482 149 aa15.86■□□□□ 0.13
HMGCL-203ENST00000374490 MECOMQ03112 1051 aa15.86■□□□□ 0.13
HMGCL-203ENST00000374490 SH3RF1Q7Z6J0 888 aa15.86■□□□□ 0.13
HMGCL-203ENST00000374490 GSDMAQ96QA5 445 aa15.86■□□□□ 0.13
HMGCL-203ENST00000374490 SRRTQ9BXP5 876 aaKnown RBP15.86■□□□□ 0.13
HMGCL-203ENST00000374490 DCP1AQ9NPI6 582 aaPredicted RBP15.86■□□□□ 0.13
HMGCL-203ENST00000374490 ANKIB1Q9P2G1 1089 aa15.86■□□□□ 0.13
HMGCL-203ENST00000374490 PLEKHA8P1O95397 391 aa15.85■□□□□ 0.13
HMGCL-203ENST00000374490 ATP2B1P20020 1258 aa15.85■□□□□ 0.13
HMGCL-203ENST00000374490 ETF1P62495 437 aaKnown RBP15.85■□□□□ 0.13
HMGCL-203ENST00000374490 SPECC1LQ69YQ0 1117 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms