RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 CYTH3O43739 400 aa18.21■□□□□ 0.51
NIPAL3-204ENST00000374399 MYO1BO43795 1136 aa18.21■□□□□ 0.51
NIPAL3-204ENST00000374399 VEGFAP15692 232 aaPredicted RBP18.21■□□□□ 0.51
NIPAL3-204ENST00000374399 KIF23Q02241 960 aaPredicted RBP18.21■□□□□ 0.51
NIPAL3-204ENST00000374399 TBC1D10BQ4KMP7 808 aaPredicted RBP18.21■□□□□ 0.51
NIPAL3-204ENST00000374399 GPC2Q8N158 579 aa18.21■□□□□ 0.51
NIPAL3-204ENST00000374399 GPT2Q8TD30 523 aa18.21■□□□□ 0.51
NIPAL3-204ENST00000374399 TEPSINQ96N21 525 aa18.21■□□□□ 0.51
NIPAL3-204ENST00000374399 HERC5Q9UII4 1024 aaKnown RBP18.21■□□□□ 0.51
NIPAL3-204ENST00000374399 V9GY48 417 aaPredicted RBP18.21■□□□□ 0.51
NIPAL3-204ENST00000374399 GADD45BO75293 160 aaPredicted RBP18.2■□□□□ 0.5
NIPAL3-204ENST00000374399 GDF11O95390 407 aa18.2■□□□□ 0.5
NIPAL3-204ENST00000374399 TTLL1O95922 423 aa18.2■□□□□ 0.5
NIPAL3-204ENST00000374399 SNHG28P0DPA3 235 aa18.2■□□□□ 0.5
NIPAL3-204ENST00000374399 KIF5BP33176 963 aa18.2■□□□□ 0.5
NIPAL3-204ENST00000374399 MAP3K10Q02779 954 aa18.2■□□□□ 0.5
NIPAL3-204ENST00000374399 LRRC47Q8N1G4 583 aaKnown RBP18.2■□□□□ 0.5
NIPAL3-204ENST00000374399 GPRC5DQ9NZD1 345 aa18.2■□□□□ 0.5
NIPAL3-204ENST00000374399 CLIP2Q9UDT6 1046 aa18.2■□□□□ 0.5
NIPAL3-204ENST00000374399 USP17L5A8MUK1 530 aa18.2■□□□□ 0.5
NIPAL3-204ENST00000374399 MPHOSPH10O00566 681 aaKnown RBP18.2■□□□□ 0.5
NIPAL3-204ENST00000374399 TBC1D12O60347 775 aa18.2■□□□□ 0.5
NIPAL3-204ENST00000374399 GOLGA8HP0CJ92 632 aa18.2■□□□□ 0.5
NIPAL3-204ENST00000374399 PDHBP11177 359 aa18.2■□□□□ 0.5
NIPAL3-204ENST00000374399 PTMSP20962 102 aa18.2■□□□□ 0.5
NIPAL3-204ENST00000374399 KIF4BQ2VIQ3 1234 aa18.2■□□□□ 0.5
NIPAL3-204ENST00000374399 USP17L2Q6R6M4 530 aa18.2■□□□□ 0.5
NIPAL3-204ENST00000374399 WASF1Q92558 559 aa18.2■□□□□ 0.5
NIPAL3-204ENST00000374399 TFIP11Q9UBB9 837 aaKnown RBP18.2■□□□□ 0.5
NIPAL3-204ENST00000374399 FIBPO43427 364 aa18.19■□□□□ 0.5
NIPAL3-204ENST00000374399 RASA3Q14644 834 aa18.19■□□□□ 0.5
NIPAL3-204ENST00000374399 SEPT2Q15019 361 aa18.19■□□□□ 0.5
NIPAL3-204ENST00000374399 TRPM4Q8TD43 1214 aa18.19■□□□□ 0.5
NIPAL3-204ENST00000374399 MKL1Q969V6 931 aa18.19■□□□□ 0.5
NIPAL3-204ENST00000374399 CPVLQ9H3G5 476 aa18.19■□□□□ 0.5
NIPAL3-204ENST00000374399 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.19■□□□□ 0.5
NIPAL3-204ENST00000374399 KCNJ14Q9UNX9 436 aa18.19■□□□□ 0.5
NIPAL3-204ENST00000374399 MTMR7Q9Y216 660 aa18.19■□□□□ 0.5
NIPAL3-204ENST00000374399 ABCB5Q2M3G0 1257 aa18.18■□□□□ 0.5
NIPAL3-204ENST00000374399 FTOQ9C0B1 505 aaKnown RBP eCLIP18.18■□□□□ 0.5
NIPAL3-204ENST00000374399 HACL1Q9UJ83 578 aa18.18■□□□□ 0.5
NIPAL3-204ENST00000374399 MMP1P03956 469 aa18.18■□□□□ 0.5
NIPAL3-204ENST00000374399 EEF2P13639 858 aaKnown RBP18.18■□□□□ 0.5
NIPAL3-204ENST00000374399 NCLP19338 710 aaKnown RBP18.18■□□□□ 0.5
NIPAL3-204ENST00000374399 U2AF2P26368 475 aaKnown RBP eCLIP18.18■□□□□ 0.5
NIPAL3-204ENST00000374399 EPS15P42566 896 aa18.18■□□□□ 0.5
NIPAL3-204ENST00000374399 HIRAP54198 1017 aaPredicted RBP18.18■□□□□ 0.5
NIPAL3-204ENST00000374399 KRT85P78386 507 aa18.18■□□□□ 0.5
NIPAL3-204ENST00000374399 NPY5RQ15761 445 aa18.18■□□□□ 0.5
NIPAL3-204ENST00000374399 KLHL40Q2TBA0 621 aa18.18■□□□□ 0.5
NIPAL3-204ENST00000374399 TMEM179Q6ZVK1 233 aa18.18■□□□□ 0.5
NIPAL3-204ENST00000374399 TRIM34Q9BYJ4 488 aa18.18■□□□□ 0.5
NIPAL3-204ENST00000374399 KANSL2Q9H9L4 492 aa18.18■□□□□ 0.5
NIPAL3-204ENST00000374399 RNF181Q9P0P0 153 aa18.18■□□□□ 0.5
NIPAL3-204ENST00000374399 NYAP2Q9P242 653 aa18.18■□□□□ 0.5
NIPAL3-204ENST00000374399 KLRF2D3W0D1 207 aa18.17■□□□□ 0.5
NIPAL3-204ENST00000374399 DDNO94850 711 aaPredicted RBP18.17■□□□□ 0.5
NIPAL3-204ENST00000374399 GH2P01242 217 aa18.17■□□□□ 0.5
NIPAL3-204ENST00000374399 PARP1P09874 1014 aaKnown RBP18.17■□□□□ 0.5
NIPAL3-204ENST00000374399 SKOR2Q2VWA4 1001 aaPredicted RBP18.17■□□□□ 0.5
NIPAL3-204ENST00000374399 MIGA2Q7L4E1 593 aa18.17■□□□□ 0.5
NIPAL3-204ENST00000374399 USP28Q96RU2 1077 aa18.17■□□□□ 0.5
NIPAL3-204ENST00000374399 VPS54Q9P1Q0 977 aa18.17■□□□□ 0.5
NIPAL3-204ENST00000374399 GNAQP50148 359 aa18.16■□□□□ 0.5
NIPAL3-204ENST00000374399 PFKFB3Q16875 520 aaPredicted RBP18.16■□□□□ 0.5
NIPAL3-204ENST00000374399 C9orf131Q5VYM1 1079 aa18.16■□□□□ 0.5
NIPAL3-204ENST00000374399 LEO1Q8WVC0 666 aaPredicted RBP18.16■□□□□ 0.5
NIPAL3-204ENST00000374399 PHF20Q9BVI0 1012 aa18.16■□□□□ 0.5
NIPAL3-204ENST00000374399 DDX49Q9Y6V7 483 aaKnown RBP18.16■□□□□ 0.5
NIPAL3-204ENST00000374399 ELP1O95163 1332 aa18.16■□□□□ 0.5
NIPAL3-204ENST00000374399 POLR2AP24928 1970 aaKnown RBP18.16■□□□□ 0.5
NIPAL3-204ENST00000374399 BTBD18B2RXH4 712 aa18.15■□□□□ 0.5
NIPAL3-204ENST00000374399 H7C1D1 291 aa18.15■□□□□ 0.5
NIPAL3-204ENST00000374399 AKAP17AQ02040 695 aaKnown RBP18.15■□□□□ 0.5
NIPAL3-204ENST00000374399 MYSM1Q5VVJ2 828 aa18.15■□□□□ 0.5
NIPAL3-204ENST00000374399 BRAPQ7Z569 592 aa18.15■□□□□ 0.5
NIPAL3-204ENST00000374399 OXER1Q8TDS5 423 aa18.15■□□□□ 0.5
NIPAL3-204ENST00000374399 SPZ1Q9BXG8 430 aa18.15■□□□□ 0.5
NIPAL3-204ENST00000374399 ATAD5Q96QE3 1844 aa18.15■□□□□ 0.5
NIPAL3-204ENST00000374399 PHF20L1A8MW92 1017 aa18.15■□□□□ 0.5
NIPAL3-204ENST00000374399 ADAMTS3O15072 1205 aa18.15■□□□□ 0.5
NIPAL3-204ENST00000374399 SCG2P13521 617 aa18.15■□□□□ 0.5
NIPAL3-204ENST00000374399 SMARCA1P28370 1054 aa18.15■□□□□ 0.5
NIPAL3-204ENST00000374399 TNNI2P48788 182 aa18.15■□□□□ 0.5
NIPAL3-204ENST00000374399 ICA1Q05084 483 aa18.15■□□□□ 0.5
NIPAL3-204ENST00000374399 ZNF543Q08ER8 600 aa18.15■□□□□ 0.5
NIPAL3-204ENST00000374399 TYW1BQ6NUM6 668 aa18.15■□□□□ 0.5
NIPAL3-204ENST00000374399 PIBF1Q8WXW3 757 aa18.15■□□□□ 0.5
NIPAL3-204ENST00000374399 LZTS2Q9BRK4 669 aa18.15■□□□□ 0.5
NIPAL3-204ENST00000374399 FRMPD2Q68DX3 1309 aaPredicted RBP18.14■□□□□ 0.5
NIPAL3-204ENST00000374399 A0A1W2PRG0 241 aa18.14■□□□□ 0.49
NIPAL3-204ENST00000374399 ATP2B2Q01814 1243 aa18.14■□□□□ 0.49
NIPAL3-204ENST00000374399 TNFAIP1Q13829 316 aa18.14■□□□□ 0.49
NIPAL3-204ENST00000374399 TRIM29Q14134 588 aa18.14■□□□□ 0.49
NIPAL3-204ENST00000374399 DIS3L2Q8IYB7 885 aaKnown RBP18.14■□□□□ 0.49
NIPAL3-204ENST00000374399 SCAND2PQ9GZW5 306 aaPredicted RBP18.14■□□□□ 0.49
NIPAL3-204ENST00000374399 DEFB129Q9H1M3 183 aa18.14■□□□□ 0.49
NIPAL3-204ENST00000374399 RIOX1Q9H6W3 641 aa18.14■□□□□ 0.49
NIPAL3-204ENST00000374399 RCOR1Q9UKL0 485 aa18.14■□□□□ 0.49
NIPAL3-204ENST00000374399 NR5A1Q13285 461 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms