RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 CTAGE1Q96RT6 745 aa14.51□□□□□ -0.09
PRPF4-201ENST00000374198 ABHD10Q9NUJ1 306 aa14.51□□□□□ -0.09
PRPF4-201ENST00000374198 GGA2Q9UJY4 613 aa14.51□□□□□ -0.09
PRPF4-201ENST00000374198 COL5A2P05997 1499 aaPredicted RBP14.51□□□□□ -0.09
PRPF4-201ENST00000374198 ITIH6Q6UXX5 1313 aa14.51□□□□□ -0.09
PRPF4-201ENST00000374198 PDHBP11177 359 aa14.51□□□□□ -0.09
PRPF4-201ENST00000374198 LSP1P33241 339 aa14.51□□□□□ -0.09
PRPF4-201ENST00000374198 EIF4A1P60842 406 aaKnown RBP14.51□□□□□ -0.09
PRPF4-201ENST00000374198 DRP2Q13474 957 aa14.51□□□□□ -0.09
PRPF4-201ENST00000374198 FILIP1LQ4L180 1135 aa14.51□□□□□ -0.09
PRPF4-201ENST00000374198 TTC39AQ5SRH9 613 aa14.51□□□□□ -0.09
PRPF4-201ENST00000374198 FAM228AQ86W67 206 aa14.51□□□□□ -0.09
PRPF4-201ENST00000374198 ZNF473Q8WTR7 871 aaKnown RBP14.51□□□□□ -0.09
PRPF4-201ENST00000374198 DBNLQ9UJU6 430 aaKnown RBP14.51□□□□□ -0.09
PRPF4-201ENST00000374198 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.51□□□□□ -0.09
PRPF4-201ENST00000374198 CPLX1O14810 134 aa14.5□□□□□ -0.09
PRPF4-201ENST00000374198 SPATA1Q5VX52 437 aa14.5□□□□□ -0.09
PRPF4-201ENST00000374198 ALS2CLQ60I27 953 aa14.5□□□□□ -0.09
PRPF4-201ENST00000374198 VPS37DQ86XT2 251 aa14.5□□□□□ -0.09
PRPF4-201ENST00000374198 KLHDC4Q8TBB5 520 aa14.5□□□□□ -0.09
PRPF4-201ENST00000374198 ATP6V0A4Q9HBG4 840 aa14.5□□□□□ -0.09
PRPF4-201ENST00000374198 HPS5Q9UPZ3 1129 aa14.5□□□□□ -0.09
PRPF4-201ENST00000374198 USP54Q70EL1 1684 aa14.5□□□□□ -0.09
PRPF4-201ENST00000374198 OVOS2A0A0G2JMS6 1433 aa14.5□□□□□ -0.09
PRPF4-201ENST00000374198 FRMD3A2A2Y4 597 aa14.5□□□□□ -0.09
PRPF4-201ENST00000374198 ATP1A2P50993 1020 aa14.5□□□□□ -0.09
PRPF4-201ENST00000374198 ZNF483Q8TF39 744 aaPredicted RBP14.5□□□□□ -0.09
PRPF4-201ENST00000374198 FLT4P35916 1363 aa14.49□□□□□ -0.09
PRPF4-201ENST00000374198 MRC1P22897 1456 aa14.49□□□□□ -0.09
PRPF4-201ENST00000374198 GOLGA8BA8MQT2 603 aa14.49□□□□□ -0.09
PRPF4-201ENST00000374198 GRM8O00222 908 aa14.49□□□□□ -0.09
PRPF4-201ENST00000374198 ONECUT3O60422 494 aaPredicted RBP14.49□□□□□ -0.09
PRPF4-201ENST00000374198 IFT88Q13099 833 aa14.49□□□□□ -0.09
PRPF4-201ENST00000374198 CCDC70Q6NSX1 233 aa14.49□□□□□ -0.09
PRPF4-201ENST00000374198 CYB5D1Q6P9G0 228 aa14.49□□□□□ -0.09
PRPF4-201ENST00000374198 DDX46Q7L014 1031 aaKnown RBP14.49□□□□□ -0.09
PRPF4-201ENST00000374198 CAGE1Q8TC20 777 aa14.49□□□□□ -0.09
PRPF4-201ENST00000374198 JAKMIP2Q96AA8 810 aa14.49□□□□□ -0.09
PRPF4-201ENST00000374198 RUFY1Q96T51 708 aa14.49□□□□□ -0.09
PRPF4-201ENST00000374198 REXO2Q9Y3B8 237 aaKnown RBP14.49□□□□□ -0.09
PRPF4-201ENST00000374198 MAP3K15Q6ZN16 1313 aa14.49□□□□□ -0.09
PRPF4-201ENST00000374198 KLF18A0A0U1RQI7 1052 aa14.49□□□□□ -0.09
PRPF4-201ENST00000374198 A1BGP04217 495 aa14.49□□□□□ -0.09
PRPF4-201ENST00000374198 SPECC1Q5M775 1068 aa14.49□□□□□ -0.09
PRPF4-201ENST00000374198 CDKAL1Q5VV42 579 aa14.49□□□□□ -0.09
PRPF4-201ENST00000374198 ARMC2Q8NEN0 867 aa14.49□□□□□ -0.09
PRPF4-201ENST00000374198 CCDC114Q96M63 670 aa14.49□□□□□ -0.09
PRPF4-201ENST00000374198 HAUS7Q99871 368 aa14.49□□□□□ -0.09
PRPF4-201ENST00000374198 HAUS4Q9H6D7 363 aa14.49□□□□□ -0.09
PRPF4-201ENST00000374198 EPN1Q9Y6I3 576 aaPredicted RBP14.49□□□□□ -0.09
PRPF4-201ENST00000374198 GOLGA6L7A0A1B0GV03 622 aa14.48□□□□□ -0.09
PRPF4-201ENST00000374198 ANKRD33BA6NCL7 494 aa14.48□□□□□ -0.09
PRPF4-201ENST00000374198 PDE2AO00408 941 aaPredicted RBP14.48□□□□□ -0.09
PRPF4-201ENST00000374198 NAA25Q14CX7 972 aa14.48□□□□□ -0.09
PRPF4-201ENST00000374198 KDM7AQ6ZMT4 941 aa14.48□□□□□ -0.09
PRPF4-201ENST00000374198 FUKQ8N0W3 1084 aa14.48□□□□□ -0.09
PRPF4-201ENST00000374198 KRI1Q8N9T8 703 aaKnown RBP14.48□□□□□ -0.09
PRPF4-201ENST00000374198 ACTR5Q9H9F9 607 aaPredicted RBP14.48□□□□□ -0.09
PRPF4-201ENST00000374198 HELLSQ9NRZ9 838 aa14.48□□□□□ -0.09
PRPF4-201ENST00000374198 SERTAD1Q9UHV2 236 aa14.48□□□□□ -0.09
PRPF4-201ENST00000374198 RNF225M0QZC1 329 aaPredicted RBP14.48□□□□□ -0.09
PRPF4-201ENST00000374198 HSF2BPO75031 334 aa14.48□□□□□ -0.09
PRPF4-201ENST00000374198 NDUFA10O95299 355 aa14.48□□□□□ -0.09
PRPF4-201ENST00000374198 SLC8A3P57103 927 aa14.48□□□□□ -0.09
PRPF4-201ENST00000374198 IQCEQ6IPM2 695 aa14.48□□□□□ -0.09
PRPF4-201ENST00000374198 C6orf89Q6UWU4 347 aa14.48□□□□□ -0.09
PRPF4-201ENST00000374198 KSR2Q6VAB6 950 aa14.48□□□□□ -0.09
PRPF4-201ENST00000374198 KRT27Q7Z3Y8 459 aa14.48□□□□□ -0.09
PRPF4-201ENST00000374198 SH2D3CQ8N5H7 860 aa14.48□□□□□ -0.09
PRPF4-201ENST00000374198 KBTBD3Q8NAB2 608 aa14.48□□□□□ -0.09
PRPF4-201ENST00000374198 RNPC3Q96LT9 517 aaKnown RBP14.48□□□□□ -0.09
PRPF4-201ENST00000374198 HINFPQ9BQA5 517 aa14.48□□□□□ -0.09
PRPF4-201ENST00000374198 COL18A1P39060 1754 aa14.48□□□□□ -0.09
PRPF4-201ENST00000374198 UTYO14607 1347 aa14.48□□□□□ -0.09
PRPF4-201ENST00000374198 WDR17Q8IZU2 1322 aa14.48□□□□□ -0.09
PRPF4-201ENST00000374198 POLR2DO15514 142 aaKnown RBP14.47□□□□□ -0.09
PRPF4-201ENST00000374198 HSPD1P10809 573 aaKnown RBP14.47□□□□□ -0.09
PRPF4-201ENST00000374198 C2orf54Q08AI8 447 aa14.47□□□□□ -0.09
PRPF4-201ENST00000374198 NNTQ13423 1086 aa14.47□□□□□ -0.09
PRPF4-201ENST00000374198 PTGISQ16647 500 aa14.47□□□□□ -0.09
PRPF4-201ENST00000374198 FAM43BQ6ZT52 329 aaPredicted RBP14.47□□□□□ -0.09
PRPF4-201ENST00000374198 GRAMD1CQ8IYS0 662 aa14.47□□□□□ -0.09
PRPF4-201ENST00000374198 KIRREL3Q8IZU9 778 aa14.47□□□□□ -0.09
PRPF4-201ENST00000374198 TSEN2Q8NCE0 465 aaKnown RBP14.47□□□□□ -0.09
PRPF4-201ENST00000374198 UPF1Q92900 1129 aaKnown RBP eCLIP14.47□□□□□ -0.093e-7■■□□□ 13.9
PRPF4-201ENST00000374198 SCLT1Q96NL6 688 aa14.47□□□□□ -0.09
PRPF4-201ENST00000374198 CCT8L2Q96SF2 557 aa14.47□□□□□ -0.09
PRPF4-201ENST00000374198 TPX2Q9ULW0 747 aaKnown RBP14.47□□□□□ -0.09
PRPF4-201ENST00000374198 LTN1O94822 1766 aa14.47□□□□□ -0.09
PRPF4-201ENST00000374198 SLC8A1P32418 973 aa14.47□□□□□ -0.09
PRPF4-201ENST00000374198 GUCY1A3Q02108 690 aa14.47□□□□□ -0.09
PRPF4-201ENST00000374198 TNNI3KQ59H18 835 aa14.47□□□□□ -0.09
PRPF4-201ENST00000374198 NLRP14Q86W24 1093 aa14.47□□□□□ -0.09
PRPF4-201ENST00000374198 RAB11FIP4Q86YS3 637 aa14.47□□□□□ -0.09
PRPF4-201ENST00000374198 MYCBPAPQ8TBZ2 947 aa14.47□□□□□ -0.09
PRPF4-201ENST00000374198 RUBCNQ92622 972 aa14.47□□□□□ -0.09
PRPF4-201ENST00000374198 AIFM3Q96NN9 605 aa14.47□□□□□ -0.09
PRPF4-201ENST00000374198 NUP88Q99567 741 aaPredicted RBP14.47□□□□□ -0.09
PRPF4-201ENST00000374198 FPGT-TNNI3KV9GXZ4 949 aa14.47□□□□□ -0.09
PRPF4-201ENST00000374198 SEMA3EO15041 775 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms