RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 SP3Q02447 781 aa18.88■□□□□ 0.61
HDHD3-202ENST00000374180 USP17L24Q0WX57 530 aa18.88■□□□□ 0.61
HDHD3-202ENST00000374180 SPICE1Q8N0Z3 855 aa18.88■□□□□ 0.61
HDHD3-202ENST00000374180 LPAR1Q92633 364 aa18.88■□□□□ 0.61
HDHD3-202ENST00000374180 CPA4Q9UI42 421 aa18.88■□□□□ 0.61
HDHD3-202ENST00000374180 NEDD4P46934 1319 aa18.87■□□□□ 0.61
HDHD3-202ENST00000374180 RAD21O60216 631 aa18.87■□□□□ 0.61
HDHD3-202ENST00000374180 NMT2O60551 498 aa18.87■□□□□ 0.61
HDHD3-202ENST00000374180 CYP21A2P08686 494 aa18.87■□□□□ 0.61
HDHD3-202ENST00000374180 NT5C2P49902 561 aa18.87■□□□□ 0.61
HDHD3-202ENST00000374180 C17orf99Q6UX52 265 aa18.87■□□□□ 0.61
HDHD3-202ENST00000374180 MKL1Q969V6 931 aa18.87■□□□□ 0.61
HDHD3-202ENST00000374180 KRT23Q9C075 422 aa18.87■□□□□ 0.61
HDHD3-202ENST00000374180 RPAP3Q9H6T3 665 aaPredicted RBP18.87■□□□□ 0.61
HDHD3-202ENST00000374180 CNNM2Q9H8M5 875 aa18.87■□□□□ 0.61
HDHD3-202ENST00000374180 IL17RBQ9NRM6 502 aa18.87■□□□□ 0.61
HDHD3-202ENST00000374180 STX8Q9UNK0 236 aa18.87■□□□□ 0.61
HDHD3-202ENST00000374180 CASP8AP2Q9UKL3 1982 aa18.87■□□□□ 0.61
HDHD3-202ENST00000374180 KIAA1755Q5JYT7 1200 aa18.86■□□□□ 0.61
HDHD3-202ENST00000374180 CATSPERGQ6ZRH7 1159 aa18.86■□□□□ 0.61
HDHD3-202ENST00000374180 P2RX7Q99572 595 aaKnown RBP18.86■□□□□ 0.61
HDHD3-202ENST00000374180 TCP11L1Q9NUJ3 509 aa18.86■□□□□ 0.61
HDHD3-202ENST00000374180 LOC285556D6RIA3 1793 aa18.86■□□□□ 0.61
HDHD3-202ENST00000374180 B4E1Z4 1266 aa18.85■□□□□ 0.61
HDHD3-202ENST00000374180 F5H6K3 240 aa18.85■□□□□ 0.61
HDHD3-202ENST00000374180 KDM4AO75164 1064 aa18.85■□□□□ 0.61
HDHD3-202ENST00000374180 KLRC3Q07444 240 aa18.85■□□□□ 0.61
HDHD3-202ENST00000374180 TRDNQ13061 729 aa18.85■□□□□ 0.61
HDHD3-202ENST00000374180 COL13A1Q5TAT6 717 aaPredicted RBP18.85■□□□□ 0.61
HDHD3-202ENST00000374180 SYNPO2Q9UMS6 1093 aa18.85■□□□□ 0.61
HDHD3-202ENST00000374180 ADGRA2Q96PE1 1338 aa18.85■□□□□ 0.61
HDHD3-202ENST00000374180 GREB1LQ9C091 1923 aaPredicted RBP18.85■□□□□ 0.61
HDHD3-202ENST00000374180 GCLCP48506 637 aaPredicted RBP18.84■□□□□ 0.61
HDHD3-202ENST00000374180 HERVK_113P62684 666 aa18.84■□□□□ 0.61
HDHD3-202ENST00000374180 NKX2-3Q8TAU0 364 aa18.84■□□□□ 0.61
HDHD3-202ENST00000374180 TANGO6Q9C0B7 1094 aa18.84■□□□□ 0.61
HDHD3-202ENST00000374180 ZSWIM5Q9P217 1185 aa18.84■□□□□ 0.61
HDHD3-202ENST00000374180 WDR46O15213 610 aaKnown RBP18.84■□□□□ 0.61
HDHD3-202ENST00000374180 BCRP11274 1271 aa18.84■□□□□ 0.61
HDHD3-202ENST00000374180 IQCA1Q86XH1 822 aa18.84■□□□□ 0.61
HDHD3-202ENST00000374180 LRRC47Q8N1G4 583 aaKnown RBP18.84■□□□□ 0.61
HDHD3-202ENST00000374180 ERO1AQ96HE7 468 aa18.84■□□□□ 0.61
HDHD3-202ENST00000374180 E7EWF7 191 aa18.83■□□□□ 0.6
HDHD3-202ENST00000374180 COG2Q14746 738 aa18.83■□□□□ 0.6
HDHD3-202ENST00000374180 KIF22Q14807 665 aa18.83■□□□□ 0.6
HDHD3-202ENST00000374180 NECTIN1Q15223 517 aa18.83■□□□□ 0.6
HDHD3-202ENST00000374180 CCDC178Q5BJE1 867 aa18.83■□□□□ 0.6
HDHD3-202ENST00000374180 ANKRD13CQ8N6S4 541 aa18.83■□□□□ 0.6
HDHD3-202ENST00000374180 CD99L2Q8TCZ2 262 aa18.83■□□□□ 0.6
HDHD3-202ENST00000374180 TTC14Q96N46 770 aa18.83■□□□□ 0.6
HDHD3-202ENST00000374180 ZKSCAN3Q9BRR0 538 aa18.83■□□□□ 0.6
HDHD3-202ENST00000374180 HOXC10Q9NYD6 342 aa18.83■□□□□ 0.6
HDHD3-202ENST00000374180 LAMA4Q16363 1823 aa18.82■□□□□ 0.6
HDHD3-202ENST00000374180 SLC27A2O14975 620 aa18.82■□□□□ 0.6
HDHD3-202ENST00000374180 NDUFB10O96000 172 aa18.82■□□□□ 0.6
HDHD3-202ENST00000374180 NOVP48745 357 aa18.82■□□□□ 0.6
HDHD3-202ENST00000374180 ARHGEF6Q15052 776 aa18.82■□□□□ 0.6
HDHD3-202ENST00000374180 RNF20Q5VTR2 975 aa18.82■□□□□ 0.6
HDHD3-202ENST00000374180 CREB3L3Q68CJ9 461 aa18.82■□□□□ 0.6
HDHD3-202ENST00000374180 RALYLQ86SE5 291 aaKnown RBP18.82■□□□□ 0.6
HDHD3-202ENST00000374180 GMCL1P1Q8NEA9 526 aa18.82■□□□□ 0.6
HDHD3-202ENST00000374180 GTF3C2Q8WUA4 911 aaPredicted RBP18.82■□□□□ 0.6
HDHD3-202ENST00000374180 TAF6LQ9Y6J9 622 aa18.82■□□□□ 0.6
HDHD3-202ENST00000374180 FLOT1O75955 427 aa18.81■□□□□ 0.6
HDHD3-202ENST00000374180 REC8O95072 547 aa18.81■□□□□ 0.6
HDHD3-202ENST00000374180 TOP1P11387 765 aaKnown RBP18.81■□□□□ 0.6
HDHD3-202ENST00000374180 LACTBP83111 547 aaPredicted RBP18.81■□□□□ 0.6
HDHD3-202ENST00000374180 FAM110CQ1W6H9 321 aa18.81■□□□□ 0.6
HDHD3-202ENST00000374180 FAM83BQ5T0W9 1011 aa18.81■□□□□ 0.6
HDHD3-202ENST00000374180 SLFN13Q68D06 897 aa18.81■□□□□ 0.6
HDHD3-202ENST00000374180 NCOA7Q8NI08 942 aa18.81■□□□□ 0.6
HDHD3-202ENST00000374180 STOX1Q6ZVD7 989 aa18.8■□□□□ 0.6
HDHD3-202ENST00000374180 CTU1Q7Z7A3 348 aaKnown RBP18.8■□□□□ 0.6
HDHD3-202ENST00000374180 DGKHQ86XP1 1220 aa18.8■□□□□ 0.6
HDHD3-202ENST00000374180 ZSCAN10Q96SZ4 725 aaPredicted RBP18.8■□□□□ 0.6
HDHD3-202ENST00000374180 NUP88Q99567 741 aaPredicted RBP18.8■□□□□ 0.6
HDHD3-202ENST00000374180 TMEM47Q9BQJ4 181 aa18.8■□□□□ 0.6
HDHD3-202ENST00000374180 UBAC1Q9BSL1 405 aa18.8■□□□□ 0.6
HDHD3-202ENST00000374180 RBPJLQ9UBG7 517 aa18.8■□□□□ 0.6
HDHD3-202ENST00000374180 SPDYE16A6NNV3 312 aaPredicted RBP18.79■□□□□ 0.6
HDHD3-202ENST00000374180 ECM2O94769 699 aaPredicted RBP18.79■□□□□ 0.6
HDHD3-202ENST00000374180 RCSD1Q6JBY9 416 aa18.79■□□□□ 0.6
HDHD3-202ENST00000374180 SAMD1Q6SPF0 538 aaPredicted RBP18.79■□□□□ 0.6
HDHD3-202ENST00000374180 LBX2Q6XYB7 198 aa18.79■□□□□ 0.6
HDHD3-202ENST00000374180 GPRC5AQ8NFJ5 357 aa18.79■□□□□ 0.6
HDHD3-202ENST00000374180 PAGR1Q9BTK6 254 aa18.79■□□□□ 0.6
HDHD3-202ENST00000374180 EFCC1Q9HA90 598 aa18.79■□□□□ 0.6
HDHD3-202ENST00000374180 MORF4L1Q9UBU8 362 aa18.79■□□□□ 0.6
HDHD3-202ENST00000374180 RABGAP1Q9Y3P9 1069 aa18.79■□□□□ 0.6
HDHD3-202ENST00000374180 MYH4Q9Y623 1939 aa18.78■□□□□ 0.6
HDHD3-202ENST00000374180 FMNL1O95466 1100 aaPredicted RBP18.78■□□□□ 0.6
HDHD3-202ENST00000374180 BMP3P12645 472 aa18.78■□□□□ 0.6
HDHD3-202ENST00000374180 MCCP23508 829 aa18.78■□□□□ 0.6
HDHD3-202ENST00000374180 DSG3P32926 999 aa18.78■□□□□ 0.6
HDHD3-202ENST00000374180 SLC1A4P43007 532 aa18.78■□□□□ 0.6
HDHD3-202ENST00000374180 PSMC4P43686 418 aa18.78■□□□□ 0.6
HDHD3-202ENST00000374180 CYB5R4Q7L1T6 521 aa18.78■□□□□ 0.6
HDHD3-202ENST00000374180 CHMP4CQ96CF2 233 aa18.78■□□□□ 0.6
HDHD3-202ENST00000374180 GMCL1Q96IK5 515 aa18.78■□□□□ 0.6
HDHD3-202ENST00000374180 ARHGAP39Q9C0H5 1083 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms