RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 RTP1P59025 263 aa23.22■■□□□ 1.31
TRAPPC3-204ENST00000373166 MAP3K12Q12852 859 aa23.22■■□□□ 1.31
TRAPPC3-204ENST00000373166 ARRDC4Q8NCT1 418 aa23.22■■□□□ 1.31
TRAPPC3-204ENST00000373166 FAM161BQ96MY7 647 aa23.22■■□□□ 1.31
TRAPPC3-204ENST00000373166 COL25A1Q9BXS0 654 aaPredicted RBP23.22■■□□□ 1.31
TRAPPC3-204ENST00000373166 HOXC10Q9NYD6 342 aa23.21■■□□□ 1.31
TRAPPC3-204ENST00000373166 STRNO43815 780 aa23.2■■□□□ 1.3
TRAPPC3-204ENST00000373166 IFIT2P09913 472 aaKnown RBP23.2■■□□□ 1.3
TRAPPC3-204ENST00000373166 CYBAP13498 195 aa23.2■■□□□ 1.3
TRAPPC3-204ENST00000373166 SHMT1P34896 483 aa23.2■■□□□ 1.3
TRAPPC3-204ENST00000373166 COG2Q14746 738 aa23.2■■□□□ 1.3
TRAPPC3-204ENST00000373166 ZNF697Q5TEC3 545 aa23.2■■□□□ 1.3
TRAPPC3-204ENST00000373166 TRPV1Q8NER1 839 aa23.2■■□□□ 1.3
TRAPPC3-204ENST00000373166 ATP11BQ9Y2G3 1177 aa23.2■■□□□ 1.3
TRAPPC3-204ENST00000373166 FOCADQ5VW36 1801 aa23.19■■□□□ 1.3
TRAPPC3-204ENST00000373166 KBTBD13C9JR72 458 aa23.19■■□□□ 1.3
TRAPPC3-204ENST00000373166 IGHA2P01877 340 aa23.19■■□□□ 1.3
TRAPPC3-204ENST00000373166 POLR3DP05423 398 aaPredicted RBP23.19■■□□□ 1.3
TRAPPC3-204ENST00000373166 ADORA2AP29274 412 aa23.19■■□□□ 1.3
TRAPPC3-204ENST00000373166 PLCD1P51178 756 aa23.19■■□□□ 1.3
TRAPPC3-204ENST00000373166 GJC2Q5T442 439 aaPredicted RBP23.19■■□□□ 1.3
TRAPPC3-204ENST00000373166 OLFML2BQ68BL8 750 aa23.19■■□□□ 1.3
TRAPPC3-204ENST00000373166 SEPT2Q15019 361 aa23.18■■□□□ 1.3
TRAPPC3-204ENST00000373166 SLC39A5Q6ZMH5 540 aa23.18■■□□□ 1.3
TRAPPC3-204ENST00000373166 MOV10L1Q9BXT6 1211 aaKnown RBP23.18■■□□□ 1.3
TRAPPC3-204ENST00000373166 BCL11AQ9H165 835 aa23.18■■□□□ 1.3
TRAPPC3-204ENST00000373166 ANTXR1Q9H6X2 564 aa23.18■■□□□ 1.3
TRAPPC3-204ENST00000373166 CDK5RAP2Q96SN8 1893 aa23.17■■□□□ 1.3
TRAPPC3-204ENST00000373166 GUCY1A2P33402 732 aa23.17■■□□□ 1.3
TRAPPC3-204ENST00000373166 TANGO6Q9C0B7 1094 aa23.17■■□□□ 1.3
TRAPPC3-204ENST00000373166 SLC5A4Q9NY91 659 aa23.17■■□□□ 1.3
TRAPPC3-204ENST00000373166 MPHOSPH10O00566 681 aaKnown RBP23.16■■□□□ 1.3
TRAPPC3-204ENST00000373166 SEPT4O43236 478 aa23.16■■□□□ 1.3
TRAPPC3-204ENST00000373166 SHCBP1Q8NEM2 672 aa23.16■■□□□ 1.3
TRAPPC3-204ENST00000373166 RIOK1Q9BRS2 568 aaKnown RBP23.16■■□□□ 1.3
TRAPPC3-204ENST00000373166 LRRCC1Q9C099 1032 aa23.16■■□□□ 1.3
TRAPPC3-204ENST00000373166 SPATC1LQ9H0A9 340 aa23.16■■□□□ 1.3
TRAPPC3-204ENST00000373166 PRDM5Q9NQX1 630 aaPredicted RBP23.16■■□□□ 1.3
TRAPPC3-204ENST00000373166 MAGEB6P1A0A0J9YX57 407 aa23.15■■□□□ 1.3
TRAPPC3-204ENST00000373166 MYCNP04198 464 aaPredicted RBP23.15■■□□□ 1.3
TRAPPC3-204ENST00000373166 ERCC3P19447 782 aa23.15■■□□□ 1.3
TRAPPC3-204ENST00000373166 GABPAQ06546 454 aa23.15■■□□□ 1.3
TRAPPC3-204ENST00000373166 SHHQ15465 462 aa23.15■■□□□ 1.3
TRAPPC3-204ENST00000373166 MB21D1Q8N884 522 aa23.15■■□□□ 1.3
TRAPPC3-204ENST00000373166 MYO5AQ9Y4I1 1855 aaKnown RBP23.14■■□□□ 1.29
TRAPPC3-204ENST00000373166 A0A1W2PRG0 241 aa23.14■■□□□ 1.29
TRAPPC3-204ENST00000373166 ANO1Q5XXA6 986 aa23.14■■□□□ 1.29
TRAPPC3-204ENST00000373166 CDX2Q99626 313 aaPredicted RBP23.14■■□□□ 1.29
TRAPPC3-204ENST00000373166 CRNKL1Q9BZJ0 848 aaKnown RBP23.14■■□□□ 1.29
TRAPPC3-204ENST00000373166 MROH8Q9H579 483 aa23.14■■□□□ 1.29
TRAPPC3-204ENST00000373166 MCM9Q9NXL9 1143 aa23.14■■□□□ 1.29
TRAPPC3-204ENST00000373166 COBLO75128 1261 aa23.13■■□□□ 1.29
TRAPPC3-204ENST00000373166 TTF1Q15361 905 aaPredicted RBP23.13■■□□□ 1.29
TRAPPC3-204ENST00000373166 CRBNQ96SW2 442 aa23.13■■□□□ 1.29
TRAPPC3-204ENST00000373166 SEMA6BQ9H3T3 888 aa23.13■■□□□ 1.29
TRAPPC3-204ENST00000373166 ADCYAP1R1P41586 468 aa23.12■■□□□ 1.29
TRAPPC3-204ENST00000373166 PLS1Q14651 629 aa23.12■■□□□ 1.29
TRAPPC3-204ENST00000373166 SNX17Q15036 470 aa23.12■■□□□ 1.29
TRAPPC3-204ENST00000373166 TRIM60Q495X7 471 aa23.12■■□□□ 1.29
TRAPPC3-204ENST00000373166 C9orf50Q5SZB4 431 aa23.12■■□□□ 1.29
TRAPPC3-204ENST00000373166 ABRAQ8N0Z2 381 aa23.12■■□□□ 1.29
TRAPPC3-204ENST00000373166 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.12■■□□□ 1.29
TRAPPC3-204ENST00000373166 BADQ92934 168 aa23.12■■□□□ 1.29
TRAPPC3-204ENST00000373166 MYH1P12882 1939 aa23.12■■□□□ 1.29
TRAPPC3-204ENST00000373166 FRMPD3Q5JV73 1810 aa23.11■■□□□ 1.29
TRAPPC3-204ENST00000373166 PRAMEF19Q5SWL8 479 aa23.11■■□□□ 1.29
TRAPPC3-204ENST00000373166 SLC9C2Q5TAH2 1124 aa23.11■■□□□ 1.29
TRAPPC3-204ENST00000373166 C1orf53Q5VUE5 145 aa23.11■■□□□ 1.29
TRAPPC3-204ENST00000373166 TMEM179Q6ZVK1 233 aa23.11■■□□□ 1.29
TRAPPC3-204ENST00000373166 NCAPG2Q86XI2 1143 aa23.11■■□□□ 1.29
TRAPPC3-204ENST00000373166 VCANP13611 3396 aa23.11■■□□□ 1.29
TRAPPC3-204ENST00000373166 DSG3P32926 999 aa23.1■■□□□ 1.29
TRAPPC3-204ENST00000373166 SMAD3P84022 425 aaKnown RBP23.1■■□□□ 1.29
TRAPPC3-204ENST00000373166 LRRC41Q15345 812 aa23.1■■□□□ 1.29
TRAPPC3-204ENST00000373166 FERMT2Q96AC1 680 aa23.1■■□□□ 1.29
TRAPPC3-204ENST00000373166 DNAJC2Q99543 621 aaKnown RBP23.1■■□□□ 1.29
TRAPPC3-204ENST00000373166 DCTPP1Q9H773 170 aa23.1■■□□□ 1.29
TRAPPC3-204ENST00000373166 PDLIM7Q9NR12 457 aa23.1■■□□□ 1.29
TRAPPC3-204ENST00000373166 EYSQ5T1H1 3165 aa23.09■■□□□ 1.29
TRAPPC3-204ENST00000373166 SMARCA5O60264 1052 aaPredicted RBP23.09■■□□□ 1.29
TRAPPC3-204ENST00000373166 FLOT1O75955 427 aa23.09■■□□□ 1.29
TRAPPC3-204ENST00000373166 FCER1AP12319 257 aa23.09■■□□□ 1.29
TRAPPC3-204ENST00000373166 MAFAQ8NHW3 353 aaPredicted RBP23.09■■□□□ 1.29
TRAPPC3-204ENST00000373166 MAML3Q96JK9 1138 aa23.09■■□□□ 1.29
TRAPPC3-204ENST00000373166 SH2D4AQ9H788 454 aa23.09■■□□□ 1.29
TRAPPC3-204ENST00000373166 ARHGEF10LQ9HCE6 1279 aa23.09■■□□□ 1.29
TRAPPC3-204ENST00000373166 SWAP70Q9UH65 585 aa23.09■■□□□ 1.29
TRAPPC3-204ENST00000373166 PCDHB15Q9Y5E8 787 aa23.09■■□□□ 1.29
TRAPPC3-204ENST00000373166 PDE6AP16499 860 aa23.08■■□□□ 1.29
TRAPPC3-204ENST00000373166 KIAA1755Q5JYT7 1200 aa23.08■■□□□ 1.29
TRAPPC3-204ENST00000373166 TRIM43BA6NCK2 446 aa23.07■■□□□ 1.28
TRAPPC3-204ENST00000373166 GOLIM4O00461 696 aa23.07■■□□□ 1.28
TRAPPC3-204ENST00000373166 EVX2Q03828 476 aa23.07■■□□□ 1.28
TRAPPC3-204ENST00000373166 TLE2Q04725 743 aa23.07■■□□□ 1.28
TRAPPC3-204ENST00000373166 FAM47AQ5JRC9 791 aa23.07■■□□□ 1.28
TRAPPC3-204ENST00000373166 SH3RF1Q7Z6J0 888 aa23.07■■□□□ 1.28
TRAPPC3-204ENST00000373166 SPICE1Q8N0Z3 855 aa23.07■■□□□ 1.28
TRAPPC3-204ENST00000373166 SDR42E1Q8WUS8 393 aa23.07■■□□□ 1.28
TRAPPC3-204ENST00000373166 TRIM43Q96BQ3 446 aaPredicted RBP23.07■■□□□ 1.28
TRAPPC3-204ENST00000373166 ATG4CQ96DT6 458 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms