RNA–Protein interactions for RNA: ENST00000372044.7

CCDC17-201, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 1,873 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-201ENST00000372044 KIF4BQ2VIQ3 1234 aa21.13■□□□□ 0.97
CCDC17-201ENST00000372044 TRPM4Q8TD43 1214 aa21.13■□□□□ 0.97
CCDC17-201ENST00000372044 CPVLQ9H3G5 476 aa21.13■□□□□ 0.97
CCDC17-201ENST00000372044 CLIP2Q9UDT6 1046 aa21.13■□□□□ 0.97
CCDC17-201ENST00000372044 ATP6V1DQ9Y5K8 247 aa21.13■□□□□ 0.97
CCDC17-201ENST00000372044 V9GY48 417 aaPredicted RBP21.13■□□□□ 0.97
CCDC17-201ENST00000372044 FIBPO43427 364 aa21.12■□□□□ 0.97
CCDC17-201ENST00000372044 DEXIO95424 95 aa21.12■□□□□ 0.97
CCDC17-201ENST00000372044 VEGFAP15692 232 aaPredicted RBP21.12■□□□□ 0.97
CCDC17-201ENST00000372044 NCLP19338 710 aaKnown RBP21.12■□□□□ 0.97
CCDC17-201ENST00000372044 USP48Q86UV5 1035 aa21.12■□□□□ 0.97
CCDC17-201ENST00000372044 GPC2Q8N158 579 aa21.12■□□□□ 0.97
CCDC17-201ENST00000372044 CCDC17Q96LX7 622 aa21.12■□□□□ 0.97
CCDC17-201ENST00000372044 MAP3K14Q99558 947 aa21.12■□□□□ 0.97
CCDC17-201ENST00000372044 GPRC5DQ9NZD1 345 aa21.12■□□□□ 0.97
CCDC17-201ENST00000372044 TTLL1O95922 423 aa21.11■□□□□ 0.97
CCDC17-201ENST00000372044 SEPT2Q15019 361 aa21.11■□□□□ 0.97
CCDC17-201ENST00000372044 USP17L2Q6R6M4 530 aa21.11■□□□□ 0.97
CCDC17-201ENST00000372044 PIBF1Q8WXW3 757 aa21.11■□□□□ 0.97
CCDC17-201ENST00000372044 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.11■□□□□ 0.97
CCDC17-201ENST00000372044 HACL1Q9UJ83 578 aa21.11■□□□□ 0.97
CCDC17-201ENST00000372044 PALM3A6NDB9 673 aaPredicted RBP21.11■□□□□ 0.97
CCDC17-201ENST00000372044 USP17L5A8MUK1 530 aa21.11■□□□□ 0.97
CCDC17-201ENST00000372044 PRPF3O43395 683 aaKnown RBP21.11■□□□□ 0.97
CCDC17-201ENST00000372044 CYTH3O43739 400 aa21.11■□□□□ 0.97
CCDC17-201ENST00000372044 GADD45BO75293 160 aaPredicted RBP21.11■□□□□ 0.97
CCDC17-201ENST00000372044 DDNO94850 711 aaPredicted RBP21.11■□□□□ 0.97
CCDC17-201ENST00000372044 EPS15P42566 896 aa21.11■□□□□ 0.97
CCDC17-201ENST00000372044 MMP14P50281 582 aa21.11■□□□□ 0.97
CCDC17-201ENST00000372044 RASA3Q14644 834 aa21.11■□□□□ 0.97
CCDC17-201ENST00000372044 MIGA2Q7L4E1 593 aa21.11■□□□□ 0.97
CCDC17-201ENST00000372044 SIAH1Q8IUQ4 282 aa21.11■□□□□ 0.97
CCDC17-201ENST00000372044 ZSCAN16Q9H4T2 348 aaPredicted RBP21.11■□□□□ 0.97
CCDC17-201ENST00000372044 TFIP11Q9UBB9 837 aaKnown RBP21.11■□□□□ 0.97
CCDC17-201ENST00000372044 KCNJ14Q9UNX9 436 aa21.11■□□□□ 0.97
CCDC17-201ENST00000372044 KIF5BP33176 963 aa21.1■□□□□ 0.97
CCDC17-201ENST00000372044 ATP2B2Q01814 1243 aa21.1■□□□□ 0.97
CCDC17-201ENST00000372044 KIF23Q02241 960 aaPredicted RBP21.1■□□□□ 0.97
CCDC17-201ENST00000372044 TEPSINQ96N21 525 aa21.1■□□□□ 0.97
CCDC17-201ENST00000372044 FTOQ9C0B1 505 aaKnown RBP eCLIP21.1■□□□□ 0.97
CCDC17-201ENST00000372044 HERC5Q9UII4 1024 aaKnown RBP21.1■□□□□ 0.97
CCDC17-201ENST00000372044 PDHBP11177 359 aa21.09■□□□□ 0.97
CCDC17-201ENST00000372044 ABCB5Q2M3G0 1257 aa21.09■□□□□ 0.97
CCDC17-201ENST00000372044 C9orf131Q5VYM1 1079 aa21.09■□□□□ 0.97
CCDC17-201ENST00000372044 GH2P01242 217 aa21.09■□□□□ 0.97
CCDC17-201ENST00000372044 EEF2P13639 858 aaKnown RBP21.09■□□□□ 0.97
CCDC17-201ENST00000372044 TMEM87AQ8NBN3 555 aa21.09■□□□□ 0.97
CCDC17-201ENST00000372044 GPT2Q8TD30 523 aa21.09■□□□□ 0.97
CCDC17-201ENST00000372044 VPS54Q9P1Q0 977 aa21.09■□□□□ 0.97
CCDC17-201ENST00000372044 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.09■□□□□ 0.97
CCDC17-201ENST00000372044 FRMPD2Q68DX3 1309 aaPredicted RBP21.08■□□□□ 0.97
CCDC17-201ENST00000372044 H7C1D1 291 aa21.08■□□□□ 0.97
CCDC17-201ENST00000372044 HIRAP54198 1017 aaPredicted RBP21.08■□□□□ 0.97
CCDC17-201ENST00000372044 WASF1Q92558 559 aa21.08■□□□□ 0.97
CCDC17-201ENST00000372044 KLRF2D3W0D1 207 aa21.07■□□□□ 0.96
CCDC17-201ENST00000372044 PARP1P09874 1014 aaKnown RBP21.07■□□□□ 0.96
CCDC17-201ENST00000372044 KRT85P78386 507 aa21.07■□□□□ 0.96
CCDC17-201ENST00000372044 TMEM179Q6ZVK1 233 aa21.07■□□□□ 0.96
CCDC17-201ENST00000372044 SNHG28P0DPA3 235 aa21.07■□□□□ 0.96
CCDC17-201ENST00000372044 AKAP17AQ02040 695 aaKnown RBP21.07■□□□□ 0.96
CCDC17-201ENST00000372044 SMCHD1A6NHR9 2005 aa21.06■□□□□ 0.96
CCDC17-201ENST00000372044 MMP1P03956 469 aa21.06■□□□□ 0.96
CCDC17-201ENST00000372044 TNNI2P48788 182 aa21.06■□□□□ 0.96
CCDC17-201ENST00000372044 ICA1Q05084 483 aa21.06■□□□□ 0.96
CCDC17-201ENST00000372044 TPRNQ4KMQ1 711 aa21.06■□□□□ 0.96
CCDC17-201ENST00000372044 ANGEL2Q5VTE6 544 aaKnown RBP21.06■□□□□ 0.96
CCDC17-201ENST00000372044 KANSL2Q9H9L4 492 aa21.06■□□□□ 0.96
CCDC17-201ENST00000372044 DDX49Q9Y6V7 483 aaKnown RBP21.06■□□□□ 0.96
CCDC17-201ENST00000372044 DOCK1Q14185 1865 aa21.06■□□□□ 0.96
CCDC17-201ENST00000372044 TBC1D12O60347 775 aa21.05■□□□□ 0.96
CCDC17-201ENST00000372044 CEBPZQ03701 1054 aaKnown RBP21.05■□□□□ 0.96
CCDC17-201ENST00000372044 TRIM29Q14134 588 aa21.05■□□□□ 0.96
CCDC17-201ENST00000372044 RGS22Q8NE09 1264 aa21.05■□□□□ 0.96
CCDC17-201ENST00000372044 USP28Q96RU2 1077 aa21.05■□□□□ 0.96
CCDC17-201ENST00000372044 NYAP2Q9P242 653 aa21.05■□□□□ 0.96
CCDC17-201ENST00000372044 BTBD18B2RXH4 712 aa21.05■□□□□ 0.96
CCDC17-201ENST00000372044 SCG2P13521 617 aa21.05■□□□□ 0.96
CCDC17-201ENST00000372044 MAP3K10Q02779 954 aa21.05■□□□□ 0.96
CCDC17-201ENST00000372044 TNFAIP1Q13829 316 aa21.05■□□□□ 0.96
CCDC17-201ENST00000372044 PFKFB3Q16875 520 aaPredicted RBP21.05■□□□□ 0.96
CCDC17-201ENST00000372044 OXER1Q8TDS5 423 aa21.05■□□□□ 0.96
CCDC17-201ENST00000372044 UBA5Q9GZZ9 404 aa21.05■□□□□ 0.96
CCDC17-201ENST00000372044 GZF1Q9H116 711 aaPredicted RBP21.05■□□□□ 0.96
CCDC17-201ENST00000372044 DEFB129Q9H1M3 183 aa21.05■□□□□ 0.96
CCDC17-201ENST00000372044 ADAMTS3O15072 1205 aa21.04■□□□□ 0.96
CCDC17-201ENST00000372044 PTMSP20962 102 aa21.04■□□□□ 0.96
CCDC17-201ENST00000372044 GNAQP50148 359 aa21.04■□□□□ 0.96
CCDC17-201ENST00000372044 PRAMEF18Q5VWM3 479 aa21.04■□□□□ 0.96
CCDC17-201ENST00000372044 LEO1Q8WVC0 666 aaPredicted RBP21.04■□□□□ 0.96
CCDC17-201ENST00000372044 GPKOWQ92917 476 aaPredicted RBP eCLIP21.04■□□□□ 0.96
CCDC17-201ENST00000372044 MKL1Q969V6 931 aa21.04■□□□□ 0.96
CCDC17-201ENST00000372044 A0A1W2PRG0 241 aa21.03■□□□□ 0.96
CCDC17-201ENST00000372044 U2AF2P26368 475 aaKnown RBP eCLIP21.03■□□□□ 0.965e-6■□□□□ 9.8
CCDC17-201ENST00000372044 NR5A1Q13285 461 aa21.03■□□□□ 0.96
CCDC17-201ENST00000372044 NPY5RQ15761 445 aa21.03■□□□□ 0.96
CCDC17-201ENST00000372044 GPR162Q16538 588 aa21.03■□□□□ 0.96
CCDC17-201ENST00000372044 KLHL40Q2TBA0 621 aa21.03■□□□□ 0.96
CCDC17-201ENST00000372044 NBPF12Q5TAG4 269 aaPredicted RBP21.03■□□□□ 0.96
CCDC17-201ENST00000372044 MYSM1Q5VVJ2 828 aa21.03■□□□□ 0.96
CCDC17-201ENST00000372044 TTBK2Q6IQ55 1244 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms