RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 ATAD5Q96QE3 1844 aa16.36■□□□□ 0.21
HMGCS2-201ENST00000369406 USP17L5A8MUK1 530 aa16.36■□□□□ 0.21
HMGCS2-201ENST00000369406 PRPF3O43395 683 aaKnown RBP16.36■□□□□ 0.21
HMGCS2-201ENST00000369406 GDF11O95390 407 aa16.36■□□□□ 0.21
HMGCS2-201ENST00000369406 DEXIO95424 95 aa16.36■□□□□ 0.21
HMGCS2-201ENST00000369406 GSE1Q14687 1217 aa16.36■□□□□ 0.21
HMGCS2-201ENST00000369406 USP17L2Q6R6M4 530 aa16.36■□□□□ 0.21
HMGCS2-201ENST00000369406 SAMD7Q7Z3H4 446 aa16.36■□□□□ 0.21
HMGCS2-201ENST00000369406 YBX3P16989 372 aaKnown RBP eCLIP16.35■□□□□ 0.21
HMGCS2-201ENST00000369406 NT5C2P49902 561 aa16.35■□□□□ 0.21
HMGCS2-201ENST00000369406 ZNF280AP59817 542 aaPredicted RBP16.35■□□□□ 0.21
HMGCS2-201ENST00000369406 SKOR2Q2VWA4 1001 aaPredicted RBP16.35■□□□□ 0.21
HMGCS2-201ENST00000369406 RBM26Q5T8P6 1007 aaKnown RBP16.35■□□□□ 0.21
HMGCS2-201ENST00000369406 TATDN1Q6P1N9 297 aa16.35■□□□□ 0.21
HMGCS2-201ENST00000369406 SIAH1Q8IUQ4 282 aa16.35■□□□□ 0.21
HMGCS2-201ENST00000369406 TRIM22Q8IYM9 498 aa16.35■□□□□ 0.21
HMGCS2-201ENST00000369406 PGBD1Q96JS3 809 aa16.35■□□□□ 0.21
HMGCS2-201ENST00000369406 CSRNP1Q96S65 589 aa16.35■□□□□ 0.21
HMGCS2-201ENST00000369406 PALM3A6NDB9 673 aaPredicted RBP16.35■□□□□ 0.21
HMGCS2-201ENST00000369406 MPHOSPH10O00566 681 aaKnown RBP16.35■□□□□ 0.21
HMGCS2-201ENST00000369406 PTMSP20962 102 aa16.35■□□□□ 0.21
HMGCS2-201ENST00000369406 PPP2R5BQ15173 497 aa16.35■□□□□ 0.21
HMGCS2-201ENST00000369406 NPY5RQ15761 445 aa16.35■□□□□ 0.21
HMGCS2-201ENST00000369406 ARHGAP27Q6ZUM4 889 aa16.35■□□□□ 0.21
HMGCS2-201ENST00000369406 SYT17Q9BSW7 474 aa16.35■□□□□ 0.21
HMGCS2-201ENST00000369406 TOP1P11387 765 aaKnown RBP16.34■□□□□ 0.21
HMGCS2-201ENST00000369406 TNIP1Q15025 636 aa16.34■□□□□ 0.21
HMGCS2-201ENST00000369406 NOM1Q5C9Z4 860 aaKnown RBP16.34■□□□□ 0.21
HMGCS2-201ENST00000369406 MICALL2Q8IY33 904 aa16.34■□□□□ 0.21
HMGCS2-201ENST00000369406 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.34■□□□□ 0.21
HMGCS2-201ENST00000369406 FAM205CA6NFA0 338 aa16.34■□□□□ 0.21
HMGCS2-201ENST00000369406 BTBD18B2RXH4 712 aa16.34■□□□□ 0.21
HMGCS2-201ENST00000369406 MMP1P03956 469 aa16.34■□□□□ 0.21
HMGCS2-201ENST00000369406 NR5A1Q13285 461 aa16.34■□□□□ 0.21
HMGCS2-201ENST00000369406 CLIP2Q9UDT6 1046 aa16.34■□□□□ 0.21
HMGCS2-201ENST00000369406 CLIC4Q9Y696 253 aa16.34■□□□□ 0.21
HMGCS2-201ENST00000369406 TBC1D10BQ4KMP7 808 aaPredicted RBP16.33■□□□□ 0.2
HMGCS2-201ENST00000369406 CCDC178Q5BJE1 867 aa16.33■□□□□ 0.2
HMGCS2-201ENST00000369406 MYSM1Q5VVJ2 828 aa16.33■□□□□ 0.2
HMGCS2-201ENST00000369406 TYW1BQ6NUM6 668 aa16.33■□□□□ 0.2
HMGCS2-201ENST00000369406 FAM151AQ8WW52 585 aa16.33■□□□□ 0.2
HMGCS2-201ENST00000369406 SPATA32Q96LK8 384 aa16.33■□□□□ 0.2
HMGCS2-201ENST00000369406 FRMPD2Q68DX3 1309 aaPredicted RBP16.33■□□□□ 0.2
HMGCS2-201ENST00000369406 SEPT2Q15019 361 aa16.33■□□□□ 0.2
HMGCS2-201ENST00000369406 CERKLQ49MI3 558 aaPredicted RBP16.33■□□□□ 0.2
HMGCS2-201ENST00000369406 EARS2Q5JPH6 523 aaKnown RBP16.33■□□□□ 0.2
HMGCS2-201ENST00000369406 GAS2L3Q86XJ1 694 aa16.33■□□□□ 0.2
HMGCS2-201ENST00000369406 GPKOWQ92917 476 aaPredicted RBP eCLIP16.33■□□□□ 0.2
HMGCS2-201ENST00000369406 MAP3K14Q99558 947 aa16.33■□□□□ 0.2
HMGCS2-201ENST00000369406 ELP1O95163 1332 aa16.32■□□□□ 0.2
HMGCS2-201ENST00000369406 PDHBP11177 359 aa16.32■□□□□ 0.2
HMGCS2-201ENST00000369406 U2AF2P26368 475 aaKnown RBP eCLIP16.32■□□□□ 0.2
HMGCS2-201ENST00000369406 UBE2HP62256 183 aa16.31■□□□□ 0.2
HMGCS2-201ENST00000369406 FOXP4Q8IVH2 680 aaPredicted RBP16.31■□□□□ 0.2
HMGCS2-201ENST00000369406 DIS3L2Q8IYB7 885 aaKnown RBP16.31■□□□□ 0.2
HMGCS2-201ENST00000369406 PHF20Q9BVI0 1012 aa16.31■□□□□ 0.2
HMGCS2-201ENST00000369406 TMOD2Q9NZR1 351 aa16.31■□□□□ 0.2
HMGCS2-201ENST00000369406 CNOT7Q9UIV1 285 aaKnown RBP16.31■□□□□ 0.2
HMGCS2-201ENST00000369406 TTLL1O95922 423 aa16.31■□□□□ 0.2
HMGCS2-201ENST00000369406 KIF5BP33176 963 aa16.31■□□□□ 0.2
HMGCS2-201ENST00000369406 ATP2B2Q01814 1243 aa16.31■□□□□ 0.2
HMGCS2-201ENST00000369406 MIGA2Q7L4E1 593 aa16.31■□□□□ 0.2
HMGCS2-201ENST00000369406 WASF1Q92558 559 aa16.31■□□□□ 0.2
HMGCS2-201ENST00000369406 SMCHD1A6NHR9 2005 aa16.31■□□□□ 0.2
HMGCS2-201ENST00000369406 KLRF2D3W0D1 207 aa16.3■□□□□ 0.2
HMGCS2-201ENST00000369406 SNHG28P0DPA3 235 aa16.3■□□□□ 0.2
HMGCS2-201ENST00000369406 EEF2P13639 858 aaKnown RBP16.3■□□□□ 0.2
HMGCS2-201ENST00000369406 LIG1P18858 919 aa16.3■□□□□ 0.2
HMGCS2-201ENST00000369406 TOB1P50616 345 aaPredicted RBP16.3■□□□□ 0.2
HMGCS2-201ENST00000369406 PFKFB3Q16875 520 aaPredicted RBP16.3■□□□□ 0.2
HMGCS2-201ENST00000369406 ZSCAN23Q3MJ62 389 aa16.3■□□□□ 0.2
HMGCS2-201ENST00000369406 SCAND2PQ9GZW5 306 aaPredicted RBP16.3■□□□□ 0.2
HMGCS2-201ENST00000369406 UBA5Q9GZZ9 404 aa16.3■□□□□ 0.2
HMGCS2-201ENST00000369406 RCOR1Q9UKL0 485 aa16.3■□□□□ 0.2
HMGCS2-201ENST00000369406 GH2P01242 217 aa16.3■□□□□ 0.2
HMGCS2-201ENST00000369406 SCG2P13521 617 aa16.3■□□□□ 0.2
HMGCS2-201ENST00000369406 RPS12P25398 132 aaKnown RBP16.3■□□□□ 0.2
HMGCS2-201ENST00000369406 BRAPQ7Z569 592 aa16.3■□□□□ 0.2
HMGCS2-201ENST00000369406 RGS22Q8NE09 1264 aa16.3■□□□□ 0.2
HMGCS2-201ENST00000369406 TRPM4Q8TD43 1214 aa16.3■□□□□ 0.2
HMGCS2-201ENST00000369406 WNT7AO00755 349 aa16.29■□□□□ 0.2
HMGCS2-201ENST00000369406 MBD3O95983 291 aa16.29■□□□□ 0.2
HMGCS2-201ENST00000369406 PARP1P09874 1014 aaKnown RBP16.29■□□□□ 0.2
HMGCS2-201ENST00000369406 TRIM29Q14134 588 aa16.29■□□□□ 0.2
HMGCS2-201ENST00000369406 TTBK2Q6IQ55 1244 aa16.29■□□□□ 0.2
HMGCS2-201ENST00000369406 TEPSINQ96N21 525 aa16.29■□□□□ 0.2
HMGCS2-201ENST00000369406 LMNB1P20700 586 aa16.29■□□□□ 0.2
HMGCS2-201ENST00000369406 AKAP17AQ02040 695 aaKnown RBP16.29■□□□□ 0.2
HMGCS2-201ENST00000369406 ABCB5Q2M3G0 1257 aa16.29■□□□□ 0.2
HMGCS2-201ENST00000369406 FKBP1CQ5VVH2 108 aa16.29■□□□□ 0.2
HMGCS2-201ENST00000369406 WWC2Q6AWC2 1192 aa16.29■□□□□ 0.2
HMGCS2-201ENST00000369406 DPF2Q92785 391 aa16.29■□□□□ 0.2
HMGCS2-201ENST00000369406 TNFRSF25Q93038 417 aa16.29■□□□□ 0.2
HMGCS2-201ENST00000369406 CCDC17Q96LX7 622 aa16.29■□□□□ 0.2
HMGCS2-201ENST00000369406 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.29■□□□□ 0.2
HMGCS2-201ENST00000369406 RTEL1Q9NZ71 1219 aa16.29■□□□□ 0.2
HMGCS2-201ENST00000369406 RASA3Q14644 834 aa16.28■□□□□ 0.2
HMGCS2-201ENST00000369406 NOSTRINQ8IVI9 506 aa16.28■□□□□ 0.2
HMGCS2-201ENST00000369406 TRIM34Q9BYJ4 488 aa16.28■□□□□ 0.2
HMGCS2-201ENST00000369406 GPCPD1Q9NPB8 672 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms