RNA–Protein interactions for RNA: ENST00000368277.3

PMF1-202, Transcript of polyamine modulated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMF1, Length 1,068 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-202ENST00000368277 TSHZ3Q63HK5 1081 aa16.35■□□□□ 0.21
PMF1-202ENST00000368277 SAMD1Q6SPF0 538 aaPredicted RBP16.35■□□□□ 0.21
PMF1-202ENST00000368277 NPLOC4Q8TAT6 608 aa16.35■□□□□ 0.21
PMF1-202ENST00000368277 GTF3C2Q8WUA4 911 aaPredicted RBP16.35■□□□□ 0.21
PMF1-202ENST00000368277 C11orf49Q9H6J7 331 aa16.35■□□□□ 0.21
PMF1-202ENST00000368277 OGDHLQ9ULD0 1010 aa16.35■□□□□ 0.21
PMF1-202ENST00000368277 RABGAP1Q9Y3P9 1069 aa16.35■□□□□ 0.21
PMF1-202ENST00000368277 SOX1O00570 391 aaPredicted RBP16.34■□□□□ 0.21
PMF1-202ENST00000368277 XRCC5P13010 732 aaKnown RBP16.34■□□□□ 0.21
PMF1-202ENST00000368277 ATP5JP18859 108 aa16.34■□□□□ 0.21
PMF1-202ENST00000368277 HAUS7Q99871 368 aa16.34■□□□□ 0.21
PMF1-202ENST00000368277 TANGO6Q9C0B7 1094 aa16.34■□□□□ 0.21
PMF1-202ENST00000368277 PTPREP23469 700 aa16.33■□□□□ 0.2
PMF1-202ENST00000368277 TMED8Q6PL24 325 aaPredicted RBP16.33■□□□□ 0.2
PMF1-202ENST00000368277 SPICE1Q8N0Z3 855 aa16.33■□□□□ 0.2
PMF1-202ENST00000368277 STK11IPQ8N1F8 1099 aa16.33■□□□□ 0.2
PMF1-202ENST00000368277 ANKLE1Q8NAG6 615 aa16.33■□□□□ 0.2
PMF1-202ENST00000368277 NBPF3Q9H094 633 aa16.33■□□□□ 0.2
PMF1-202ENST00000368277 MCM3APO60318 1980 aa16.32■□□□□ 0.2
PMF1-202ENST00000368277 CCNA1P78396 465 aa16.32■□□□□ 0.2
PMF1-202ENST00000368277 LTBP2Q14767 1821 aa16.32■□□□□ 0.2
PMF1-202ENST00000368277 LHX8Q68G74 356 aa16.32■□□□□ 0.2
PMF1-202ENST00000368277 SIAH1Q8IUQ4 282 aa16.32■□□□□ 0.2
PMF1-202ENST00000368277 LRCH3Q96II8 777 aa16.32■□□□□ 0.2
PMF1-202ENST00000368277 PUS7LQ9H0K6 701 aaKnown RBP16.32■□□□□ 0.2
PMF1-202ENST00000368277 SLC4A4Q9Y6R1 1079 aa16.32■□□□□ 0.2
PMF1-202ENST00000368277 USP17L12C9JPN9 530 aa16.31■□□□□ 0.2
PMF1-202ENST00000368277 USP17L21D6R901 530 aa16.31■□□□□ 0.2
PMF1-202ENST00000368277 CYP2C19P33261 490 aa16.31■□□□□ 0.2
PMF1-202ENST00000368277 CDK8P49336 464 aa16.31■□□□□ 0.2
PMF1-202ENST00000368277 ICA1Q05084 483 aa16.31■□□□□ 0.2
PMF1-202ENST00000368277 GRB14Q14449 540 aa16.31■□□□□ 0.2
PMF1-202ENST00000368277 LBX2Q6XYB7 198 aa16.31■□□□□ 0.2
PMF1-202ENST00000368277 TMEM179Q6ZVK1 233 aa16.31■□□□□ 0.2
PMF1-202ENST00000368277 TRPV1Q8NER1 839 aa16.31■□□□□ 0.2
PMF1-202ENST00000368277 ATG4CQ96DT6 458 aa16.31■□□□□ 0.2
PMF1-202ENST00000368277 MOV10L1Q9BXT6 1211 aaKnown RBP16.31■□□□□ 0.2
PMF1-202ENST00000368277 LRRCC1Q9C099 1032 aa16.31■□□□□ 0.2
PMF1-202ENST00000368277 SLC15A5A6NIM6 579 aa16.3■□□□□ 0.2
PMF1-202ENST00000368277 CNGA1P29973 690 aa16.3■□□□□ 0.2
PMF1-202ENST00000368277 ATP2B2Q01814 1243 aa16.3■□□□□ 0.2
PMF1-202ENST00000368277 C12orf60Q5U649 245 aa16.3■□□□□ 0.2
PMF1-202ENST00000368277 ANO1Q5XXA6 986 aa16.3■□□□□ 0.2
PMF1-202ENST00000368277 TRMT44Q8IYL2 757 aaKnown RBP16.3■□□□□ 0.2
PMF1-202ENST00000368277 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.3■□□□□ 0.2
PMF1-202ENST00000368277 ATP8A2Q9NTI2 1148 aa16.3■□□□□ 0.2
PMF1-202ENST00000368277 SWAP70Q9UH65 585 aa16.3■□□□□ 0.2
PMF1-202ENST00000368277 IVNS1ABPQ9Y6Y0 642 aa16.3■□□□□ 0.2
PMF1-202ENST00000368277 GLRX3O76003 335 aaKnown RBP16.29■□□□□ 0.2
PMF1-202ENST00000368277 PLS1Q14651 629 aa16.29■□□□□ 0.2
PMF1-202ENST00000368277 LRRC26Q2I0M4 334 aa16.29■□□□□ 0.2
PMF1-202ENST00000368277 SPATC1LQ9H0A9 340 aa16.29■□□□□ 0.2
PMF1-202ENST00000368277 RAD21O60216 631 aa16.28■□□□□ 0.2
PMF1-202ENST00000368277 FLOT1O75955 427 aa16.28■□□□□ 0.2
PMF1-202ENST00000368277 COL6A1P12109 1028 aa16.28■□□□□ 0.2
PMF1-202ENST00000368277 ERCC3P19447 782 aa16.28■□□□□ 0.2
PMF1-202ENST00000368277 ADORA2AP29274 412 aa16.28■□□□□ 0.2
PMF1-202ENST00000368277 DSG3P32926 999 aa16.28■□□□□ 0.2
PMF1-202ENST00000368277 MAGEA10P43363 369 aaPredicted RBP16.28■□□□□ 0.2
PMF1-202ENST00000368277 COG2Q14746 738 aa16.28■□□□□ 0.2
PMF1-202ENST00000368277 UBE3CQ15386 1083 aa16.28■□□□□ 0.2
PMF1-202ENST00000368277 MFSD14CQ5VZR4 134 aa16.28■□□□□ 0.2
PMF1-202ENST00000368277 CTR9Q6PD62 1173 aa16.28■□□□□ 0.2
PMF1-202ENST00000368277 C16orf86Q6ZW13 317 aa16.28■□□□□ 0.2
PMF1-202ENST00000368277 GDF15Q99988 308 aa16.28■□□□□ 0.2
PMF1-202ENST00000368277 VCPKMTQ9H867 229 aa16.28■□□□□ 0.2
PMF1-202ENST00000368277 ARHGEF10LQ9HCE6 1279 aa16.28■□□□□ 0.2
PMF1-202ENST00000368277 FBXO28Q9NVF7 368 aa16.28■□□□□ 0.2
PMF1-202ENST00000368277 COBLO75128 1261 aa16.27■□□□□ 0.2
PMF1-202ENST00000368277 EEF2P13639 858 aaKnown RBP16.27■□□□□ 0.2
PMF1-202ENST00000368277 CAPN2P17655 700 aa16.27■□□□□ 0.2
PMF1-202ENST00000368277 NCAPG2Q86XI2 1143 aa16.27■□□□□ 0.2
PMF1-202ENST00000368277 DDX20Q9UHI6 824 aaKnown RBP16.27■□□□□ 0.2
PMF1-202ENST00000368277 TMX2Q9Y320 296 aa16.27■□□□□ 0.2
PMF1-202ENST00000368277 HOXC6P09630 235 aa16.26■□□□□ 0.19
PMF1-202ENST00000368277 ATN1P54259 1190 aaPredicted RBP16.26■□□□□ 0.19
PMF1-202ENST00000368277 PRAMEF19Q5SWL8 479 aa16.26■□□□□ 0.19
PMF1-202ENST00000368277 DPP9Q86TI2 863 aa16.26■□□□□ 0.19
PMF1-202ENST00000368277 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.26■□□□□ 0.19
PMF1-202ENST00000368277 CHMP4BQ9H444 224 aaKnown RBP16.26■□□□□ 0.19
PMF1-202ENST00000368277 ECHDC1Q9NTX5 307 aa16.26■□□□□ 0.19
PMF1-202ENST00000368277 M0R2C6 588 aa16.25■□□□□ 0.19
PMF1-202ENST00000368277 CYBAP13498 195 aa16.25■□□□□ 0.19
PMF1-202ENST00000368277 TMEM132BQ14DG7 1078 aa16.25■□□□□ 0.19
PMF1-202ENST00000368277 GJC2Q5T442 439 aaPredicted RBP16.25■□□□□ 0.19
PMF1-202ENST00000368277 AMOTL1Q8IY63 956 aa16.25■□□□□ 0.19
PMF1-202ENST00000368277 OTUD7AQ8TE49 926 aaPredicted RBP16.25■□□□□ 0.19
PMF1-202ENST00000368277 OSBP2Q969R2 916 aa16.25■□□□□ 0.19
PMF1-202ENST00000368277 STRBPQ96SI9 672 aaKnown RBP16.25■□□□□ 0.19
PMF1-202ENST00000368277 NUP88Q99567 741 aaPredicted RBP16.25■□□□□ 0.19
PMF1-202ENST00000368277 SENP6Q9GZR1 1112 aaPredicted RBP16.25■□□□□ 0.19
PMF1-202ENST00000368277 EPB41L4AQ9HCS5 686 aaPredicted RBP16.25■□□□□ 0.19
PMF1-202ENST00000368277 HOXC10Q9NYD6 342 aa16.25■□□□□ 0.19
PMF1-202ENST00000368277 COL6A3P12111 3177 aa16.25■□□□□ 0.19
PMF1-202ENST00000368277 GSG1L2A8MUP6 293 aa16.24■□□□□ 0.19
PMF1-202ENST00000368277 MINDY4BA8MYZ0 360 aa16.24■□□□□ 0.19
PMF1-202ENST00000368277 WDR46O15213 610 aaKnown RBP16.24■□□□□ 0.19
PMF1-202ENST00000368277 IGHA2P01877 340 aa16.24■□□□□ 0.19
PMF1-202ENST00000368277 MYCNP04198 464 aaPredicted RBP16.24■□□□□ 0.19
PMF1-202ENST00000368277 MDM2Q00987 491 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms