RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 SEL1L2Q5TEA6 688 aa18.4■□□□□ 0.54
SCAF8-201ENST00000367178 PSMD1Q99460 953 aa18.4■□□□□ 0.54
SCAF8-201ENST00000367178 IMPACTQ9P2X3 320 aa18.4■□□□□ 0.54
SCAF8-201ENST00000367178 DCAF15Q66K64 600 aa18.4■□□□□ 0.54
SCAF8-201ENST00000367178 MCTP2Q6DN12 878 aa18.4■□□□□ 0.54
SCAF8-201ENST00000367178 CCDC84Q86UT8 332 aaPredicted RBP18.4■□□□□ 0.54
SCAF8-201ENST00000367178 MTRF1LQ9UGC7 380 aaKnown RBP18.4■□□□□ 0.54
SCAF8-201ENST00000367178 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.39■□□□□ 0.53
SCAF8-201ENST00000367178 PABPN1LA6NDY0 278 aaKnown RBP18.39■□□□□ 0.53
SCAF8-201ENST00000367178 PPEF1O14829 653 aaPredicted RBP18.39■□□□□ 0.53
SCAF8-201ENST00000367178 CALCOCO2Q13137 446 aa18.39■□□□□ 0.53
SCAF8-201ENST00000367178 TMTC1Q8IUR5 882 aa18.39■□□□□ 0.53
SCAF8-201ENST00000367178 GPKOWQ92917 476 aaPredicted RBP eCLIP18.39■□□□□ 0.532e-9■□□□□ 9.5
SCAF8-201ENST00000367178 TET3O43151 1660 aa18.39■□□□□ 0.53
SCAF8-201ENST00000367178 PPP1R7Q15435 360 aa18.39■□□□□ 0.53
SCAF8-201ENST00000367178 SMCR8Q8TEV9 937 aaPredicted RBP18.39■□□□□ 0.53
SCAF8-201ENST00000367178 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.39■□□□□ 0.53
SCAF8-201ENST00000367178 BBOX1O75936 387 aa18.39■□□□□ 0.53
SCAF8-201ENST00000367178 NEK8Q86SG6 692 aa18.39■□□□□ 0.53
SCAF8-201ENST00000367178 ZNF589Q86UQ0 364 aaPredicted RBP18.39■□□□□ 0.53
SCAF8-201ENST00000367178 FBXO18Q8NFZ0 1043 aa18.39■□□□□ 0.53
SCAF8-201ENST00000367178 STMN4Q9H169 189 aaPredicted RBP18.39■□□□□ 0.53
SCAF8-201ENST00000367178 SPATA31A3Q5VYP0 1347 aa18.39■□□□□ 0.53
SCAF8-201ENST00000367178 ATP10DQ9P241 1426 aa18.39■□□□□ 0.53
SCAF8-201ENST00000367178 KDM3AQ9Y4C1 1321 aa18.39■□□□□ 0.53
SCAF8-201ENST00000367178 TMC4Q7Z404 712 aa18.39■□□□□ 0.53
SCAF8-201ENST00000367178 PAIP2Q9BPZ3 127 aaKnown RBP18.39■□□□□ 0.53
SCAF8-201ENST00000367178 ALAS1P13196 640 aa18.38■□□□□ 0.53
SCAF8-201ENST00000367178 SCRN1Q12765 414 aa18.38■□□□□ 0.53
SCAF8-201ENST00000367178 SLFN13Q68D06 897 aa18.38■□□□□ 0.53
SCAF8-201ENST00000367178 GALNT17Q6IS24 598 aa18.38■□□□□ 0.53
SCAF8-201ENST00000367178 NAPGQ99747 312 aaPredicted RBP18.38■□□□□ 0.53
SCAF8-201ENST00000367178 PCDHA12Q9UN75 941 aa18.38■□□□□ 0.53
SCAF8-201ENST00000367178 ARHGAP6O43182 974 aa18.38■□□□□ 0.53
SCAF8-201ENST00000367178 FBXO11Q86XK2 927 aa18.38■□□□□ 0.53
SCAF8-201ENST00000367178 ERCC6L2Q5T890 1561 aa18.38■□□□□ 0.53
SCAF8-201ENST00000367178 PKP1Q13835 747 aa18.38■□□□□ 0.53
SCAF8-201ENST00000367178 PRR16Q569H4 304 aa18.38■□□□□ 0.53
SCAF8-201ENST00000367178 JAKMIP2Q96AA8 810 aa18.38■□□□□ 0.53
SCAF8-201ENST00000367178 MRPL11Q9Y3B7 192 aaKnown RBP18.38■□□□□ 0.53
SCAF8-201ENST00000367178 NR1I2O75469 434 aa18.37■□□□□ 0.53
SCAF8-201ENST00000367178 CMA1P23946 247 aa18.37■□□□□ 0.53
SCAF8-201ENST00000367178 ADD2P35612 726 aa18.37■□□□□ 0.53
SCAF8-201ENST00000367178 TERF1P54274 439 aa18.37■□□□□ 0.53
SCAF8-201ENST00000367178 PI16Q6UXB8 463 aa18.37■□□□□ 0.53
SCAF8-201ENST00000367178 CCDC25Q86WR0 208 aa18.37■□□□□ 0.53
SCAF8-201ENST00000367178 CDAN1Q8IWY9 1227 aa18.37■□□□□ 0.53
SCAF8-201ENST00000367178 CYP27B1O15528 508 aa18.37■□□□□ 0.53
SCAF8-201ENST00000367178 OR52Z1P0C646 297 aa18.37■□□□□ 0.53
SCAF8-201ENST00000367178 TECP42680 631 aa18.37■□□□□ 0.53
SCAF8-201ENST00000367178 MAGEA1P43355 309 aa18.37■□□□□ 0.53
SCAF8-201ENST00000367178 SLC8A3P57103 927 aa18.37■□□□□ 0.53
SCAF8-201ENST00000367178 SREK1Q8WXA9 508 aaKnown RBP18.37■□□□□ 0.53
SCAF8-201ENST00000367178 DNM2P50570 870 aa18.37■□□□□ 0.53
SCAF8-201ENST00000367178 EVCP57679 992 aa18.37■□□□□ 0.53
SCAF8-201ENST00000367178 MIER3Q7Z3K6 550 aa18.37■□□□□ 0.53
SCAF8-201ENST00000367178 ATRIPQ8WXE1 791 aa18.37■□□□□ 0.53
SCAF8-201ENST00000367178 CCDC114Q96M63 670 aa18.37■□□□□ 0.53
SCAF8-201ENST00000367178 TAF12Q16514 161 aa18.37■□□□□ 0.53
SCAF8-201ENST00000367178 GNPTABQ3T906 1256 aa18.37■□□□□ 0.53
SCAF8-201ENST00000367178 APOA5Q6Q788 366 aa18.37■□□□□ 0.53
SCAF8-201ENST00000367178 KRT27Q7Z3Y8 459 aa18.37■□□□□ 0.53
SCAF8-201ENST00000367178 CCDC17Q96LX7 622 aa18.37■□□□□ 0.53
SCAF8-201ENST00000367178 SSX2IPQ9Y2D8 614 aa18.37■□□□□ 0.53
SCAF8-201ENST00000367178 TLDC2A0PJX2 215 aa18.36■□□□□ 0.53
SCAF8-201ENST00000367178 EAPPQ56P03 285 aaPredicted RBP18.36■□□□□ 0.53
SCAF8-201ENST00000367178 TRIM6Q9C030 488 aaPredicted RBP18.36■□□□□ 0.53
SCAF8-201ENST00000367178 A2ML1A8K2U0 1454 aa18.36■□□□□ 0.53
SCAF8-201ENST00000367178 TESPA1A2RU30 521 aaPredicted RBP18.36■□□□□ 0.53
SCAF8-201ENST00000367178 SIRT2Q8IXJ6 389 aa18.36■□□□□ 0.53
SCAF8-201ENST00000367178 NAP1L3Q99457 506 aaPredicted RBP18.36■□□□□ 0.53
SCAF8-201ENST00000367178 ADCY10Q96PN6 1610 aa18.36■□□□□ 0.53
SCAF8-201ENST00000367178 PPP2R3AQ06190 1150 aa18.36■□□□□ 0.53
SCAF8-201ENST00000367178 ABCB5Q2M3G0 1257 aa18.36■□□□□ 0.53
SCAF8-201ENST00000367178 OTUD6BQ8N6M0 293 aa18.36■□□□□ 0.53
SCAF8-201ENST00000367178 POLR2MP0CAP2 368 aa18.36■□□□□ 0.53
SCAF8-201ENST00000367178 MTX1Q13505 466 aa18.36■□□□□ 0.53
SCAF8-201ENST00000367178 GPBP1Q86WP2 473 aa18.36■□□□□ 0.53
SCAF8-201ENST00000367178 M0R2C6 588 aa18.35■□□□□ 0.53
SCAF8-201ENST00000367178 DYNLL1P63167 89 aaKnown RBP18.35■□□□□ 0.53
SCAF8-201ENST00000367178 CCDC26Q8TAB7 109 aa18.35■□□□□ 0.53
SCAF8-201ENST00000367178 GLG1Q92896 1179 aa18.35■□□□□ 0.53
SCAF8-201ENST00000367178 TRERF1Q96PN7 1200 aa18.35■□□□□ 0.53
SCAF8-201ENST00000367178 PCDHA7Q9UN72 937 aa18.35■□□□□ 0.53
SCAF8-201ENST00000367178 TMEM232C9JQI7 657 aa18.35■□□□□ 0.53
SCAF8-201ENST00000367178 KLHL30Q0D2K2 578 aa18.35■□□□□ 0.53
SCAF8-201ENST00000367178 LIN9Q5TKA1 542 aa18.35■□□□□ 0.53
SCAF8-201ENST00000367178 NOX5Q96PH1 765 aa18.35■□□□□ 0.53
SCAF8-201ENST00000367178 NSRP1Q9H0G5 558 aaKnown RBP18.35■□□□□ 0.53
SCAF8-201ENST00000367178 ARAP3Q8WWN8 1544 aa18.35■□□□□ 0.53
SCAF8-201ENST00000367178 PAGR1Q9BTK6 254 aa18.35■□□□□ 0.53
SCAF8-201ENST00000367178 MAK16Q9BXY0 300 aaKnown RBP18.35■□□□□ 0.53
SCAF8-201ENST00000367178 XPO4Q9C0E2 1151 aaKnown RBP18.35■□□□□ 0.53
SCAF8-201ENST00000367178 KCNG1Q9UIX4 513 aa18.35■□□□□ 0.53
SCAF8-201ENST00000367178 ZNF772Q68DY9 489 aaPredicted RBP18.34■□□□□ 0.53
SCAF8-201ENST00000367178 THRAP3Q9Y2W1 955 aaKnown RBP18.34■□□□□ 0.53
SCAF8-201ENST00000367178 PCDHA1Q9Y5I3 950 aa18.34■□□□□ 0.53
SCAF8-201ENST00000367178 SASH1O94885 1247 aa18.34■□□□□ 0.53
SCAF8-201ENST00000367178 FERP16591 822 aa18.34■□□□□ 0.53
SCAF8-201ENST00000367178 OTUD6AQ7L8S5 288 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms