RNA–Protein interactions for RNA: ENST00000361726.6

GJB1-201, Transcript of gap junction protein beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJB1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-201ENST00000361726 KRT85P78386 507 aa16.3■□□□□ 0.2
GJB1-201ENST00000361726 TRIM29Q14134 588 aa16.3■□□□□ 0.2
GJB1-201ENST00000361726 USP48Q86UV5 1035 aa16.3■□□□□ 0.2
GJB1-201ENST00000361726 TMEM87AQ8NBN3 555 aa16.3■□□□□ 0.2
GJB1-201ENST00000361726 RGS22Q8NE09 1264 aa16.3■□□□□ 0.2
GJB1-201ENST00000361726 HERC5Q9UII4 1024 aaKnown RBP16.3■□□□□ 0.2
GJB1-201ENST00000361726 ASTN2O75129 1339 aaPredicted RBP16.3■□□□□ 0.2
GJB1-201ENST00000361726 PKN1Q16512 942 aa16.3■□□□□ 0.2
GJB1-201ENST00000361726 KIF4BQ2VIQ3 1234 aa16.3■□□□□ 0.2
GJB1-201ENST00000361726 SKOR2Q2VWA4 1001 aaPredicted RBP16.3■□□□□ 0.2
GJB1-201ENST00000361726 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.3■□□□□ 0.2
GJB1-201ENST00000361726 RNF181Q9P0P0 153 aa16.3■□□□□ 0.2
GJB1-201ENST00000361726 CLIP2Q9UDT6 1046 aa16.3■□□□□ 0.2
GJB1-201ENST00000361726 SCAF8Q9UPN6 1271 aaKnown RBP16.3■□□□□ 0.2
GJB1-201ENST00000361726 V9GY48 417 aaPredicted RBP16.3■□□□□ 0.2
GJB1-201ENST00000361726 POLR2AP24928 1970 aaKnown RBP16.29■□□□□ 0.2
GJB1-201ENST00000361726 PALM3A6NDB9 673 aaPredicted RBP16.29■□□□□ 0.2
GJB1-201ENST00000361726 KIF28PB7ZC32 967 aa16.29■□□□□ 0.2
GJB1-201ENST00000361726 GOLGA8HP0CJ92 632 aa16.29■□□□□ 0.2
GJB1-201ENST00000361726 ATP2B2Q01814 1243 aa16.29■□□□□ 0.2
GJB1-201ENST00000361726 KIF23Q02241 960 aaPredicted RBP16.29■□□□□ 0.2
GJB1-201ENST00000361726 RRP1BQ14684 758 aaKnown RBP16.29■□□□□ 0.2
GJB1-201ENST00000361726 ABCB5Q2M3G0 1257 aa16.29■□□□□ 0.2
GJB1-201ENST00000361726 GPC2Q8N158 579 aa16.29■□□□□ 0.2
GJB1-201ENST00000361726 TFIP11Q9UBB9 837 aaKnown RBP16.29■□□□□ 0.2
GJB1-201ENST00000361726 DDX49Q9Y6V7 483 aaKnown RBP16.29■□□□□ 0.2
GJB1-201ENST00000361726 DCAF8L1A6NGE4 600 aa16.28■□□□□ 0.2
GJB1-201ENST00000361726 PARP1P09874 1014 aaKnown RBP16.28■□□□□ 0.2
GJB1-201ENST00000361726 TNNI2P48788 182 aa16.28■□□□□ 0.2
GJB1-201ENST00000361726 GNAQP50148 359 aa16.28■□□□□ 0.2
GJB1-201ENST00000361726 USP17L2Q6R6M4 530 aa16.28■□□□□ 0.2
GJB1-201ENST00000361726 TMEM179Q6ZVK1 233 aa16.28■□□□□ 0.2
GJB1-201ENST00000361726 PIBF1Q8WXW3 757 aa16.28■□□□□ 0.2
GJB1-201ENST00000361726 PGAP2Q9UHJ9 254 aa16.28■□□□□ 0.2
GJB1-201ENST00000361726 KCNJ14Q9UNX9 436 aa16.28■□□□□ 0.2
GJB1-201ENST00000361726 USP17L5A8MUK1 530 aa16.27■□□□□ 0.2
GJB1-201ENST00000361726 H7C1D1 291 aa16.27■□□□□ 0.2
GJB1-201ENST00000361726 GADD45BO75293 160 aaPredicted RBP16.27■□□□□ 0.2
GJB1-201ENST00000361726 JAG1P78504 1218 aa16.27■□□□□ 0.2
GJB1-201ENST00000361726 RASA3Q14644 834 aa16.27■□□□□ 0.2
GJB1-201ENST00000361726 SEPT2Q15019 361 aa16.27■□□□□ 0.2
GJB1-201ENST00000361726 SLC35G1Q2M3R5 365 aa16.27■□□□□ 0.2
GJB1-201ENST00000361726 PPP4R3BQ5MIZ7 849 aa16.27■□□□□ 0.2
GJB1-201ENST00000361726 GPT2Q8TD30 523 aa16.27■□□□□ 0.2
GJB1-201ENST00000361726 SHISA4Q96DD7 197 aa16.27■□□□□ 0.2
GJB1-201ENST00000361726 GPRC5DQ9NZD1 345 aa16.27■□□□□ 0.2
GJB1-201ENST00000361726 HACL1Q9UJ83 578 aa16.27■□□□□ 0.2
GJB1-201ENST00000361726 UTRNP46939 3433 aa16.27■□□□□ 0.2
GJB1-201ENST00000361726 KLRF2D3W0D1 207 aa16.27■□□□□ 0.19
GJB1-201ENST00000361726 GH2P01242 217 aa16.27■□□□□ 0.19
GJB1-201ENST00000361726 MMP1P03956 469 aa16.27■□□□□ 0.19
GJB1-201ENST00000361726 PDHBP11177 359 aa16.27■□□□□ 0.19
GJB1-201ENST00000361726 EEF2P13639 858 aaKnown RBP16.27■□□□□ 0.19
GJB1-201ENST00000361726 TNFAIP1Q13829 316 aa16.27■□□□□ 0.19
GJB1-201ENST00000361726 CSPP1Q1MSJ5 1256 aa16.27■□□□□ 0.19
GJB1-201ENST00000361726 KLHL40Q2TBA0 621 aa16.27■□□□□ 0.19
GJB1-201ENST00000361726 BRAPQ7Z569 592 aa16.27■□□□□ 0.19
GJB1-201ENST00000361726 TRPM4Q8TD43 1214 aa16.27■□□□□ 0.19
GJB1-201ENST00000361726 KANSL2Q9H9L4 492 aa16.27■□□□□ 0.19
GJB1-201ENST00000361726 VPS54Q9P1Q0 977 aa16.27■□□□□ 0.19
GJB1-201ENST00000361726 CYTH3O43739 400 aa16.26■□□□□ 0.19
GJB1-201ENST00000361726 SCG2P13521 617 aa16.26■□□□□ 0.19
GJB1-201ENST00000361726 ICA1Q05084 483 aa16.26■□□□□ 0.19
GJB1-201ENST00000361726 GNL2Q13823 731 aaKnown RBP16.26■□□□□ 0.19
GJB1-201ENST00000361726 LZTS2Q9BRK4 669 aa16.26■□□□□ 0.19
GJB1-201ENST00000361726 FTOQ9C0B1 505 aaKnown RBP eCLIP16.26■□□□□ 0.19
GJB1-201ENST00000361726 CPVLQ9H3G5 476 aa16.26■□□□□ 0.19
GJB1-201ENST00000361726 NYAP2Q9P242 653 aa16.26■□□□□ 0.19
GJB1-201ENST00000361726 FRMPD2Q68DX3 1309 aaPredicted RBP16.26■□□□□ 0.19
GJB1-201ENST00000361726 DOCK1Q14185 1865 aa16.25■□□□□ 0.19
GJB1-201ENST00000361726 TBC1D12O60347 775 aa16.25■□□□□ 0.19
GJB1-201ENST00000361726 SNHG28P0DPA3 235 aa16.25■□□□□ 0.19
GJB1-201ENST00000361726 PFKFB3Q16875 520 aaPredicted RBP16.25■□□□□ 0.19
GJB1-201ENST00000361726 ASPRV1Q53RT3 343 aa16.25■□□□□ 0.19
GJB1-201ENST00000361726 C9orf131Q5VYM1 1079 aa16.25■□□□□ 0.19
GJB1-201ENST00000361726 MIGA2Q7L4E1 593 aa16.25■□□□□ 0.19
GJB1-201ENST00000361726 LEO1Q8WVC0 666 aaPredicted RBP16.25■□□□□ 0.19
GJB1-201ENST00000361726 SPATA32Q96LK8 384 aa16.25■□□□□ 0.19
GJB1-201ENST00000361726 ZNF396Q96N95 335 aaPredicted RBP16.25■□□□□ 0.19
GJB1-201ENST00000361726 SPZ1Q9BXG8 430 aa16.25■□□□□ 0.19
GJB1-201ENST00000361726 SCAND2PQ9GZW5 306 aaPredicted RBP16.25■□□□□ 0.19
GJB1-201ENST00000361726 GZF1Q9H116 711 aaPredicted RBP16.25■□□□□ 0.19
GJB1-201ENST00000361726 CABP5Q9NP86 173 aa16.25■□□□□ 0.19
GJB1-201ENST00000361726 RBM27Q9P2N5 1060 aaKnown RBP16.25■□□□□ 0.19
GJB1-201ENST00000361726 DDNO94850 711 aaPredicted RBP16.24■□□□□ 0.19
GJB1-201ENST00000361726 VEGFAP15692 232 aaPredicted RBP16.24■□□□□ 0.19
GJB1-201ENST00000361726 XBP1P17861 261 aa16.24■□□□□ 0.19
GJB1-201ENST00000361726 U2AF2P26368 475 aaKnown RBP eCLIP16.24■□□□□ 0.19
GJB1-201ENST00000361726 EPS15P42566 896 aa16.24■□□□□ 0.19
GJB1-201ENST00000361726 CEBPZQ03701 1054 aaKnown RBP16.24■□□□□ 0.19
GJB1-201ENST00000361726 SAFBQ15424 915 aaKnown RBP eCLIP16.24■□□□□ 0.19
GJB1-201ENST00000361726 TPRNQ4KMQ1 711 aa16.24■□□□□ 0.19
GJB1-201ENST00000361726 MYSM1Q5VVJ2 828 aa16.24■□□□□ 0.19
GJB1-201ENST00000361726 SIAH1Q8IUQ4 282 aa16.24■□□□□ 0.19
GJB1-201ENST00000361726 DIS3L2Q8IYB7 885 aaKnown RBP16.24■□□□□ 0.19
GJB1-201ENST00000361726 TEPSINQ96N21 525 aa16.24■□□□□ 0.19
GJB1-201ENST00000361726 USP28Q96RU2 1077 aa16.24■□□□□ 0.19
GJB1-201ENST00000361726 CFAP45Q9UL16 551 aa16.24■□□□□ 0.19
GJB1-201ENST00000361726 ELP1O95163 1332 aa16.24■□□□□ 0.19
GJB1-201ENST00000361726 MBD3O95983 291 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms