RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 GOLGA6L22H0YM25 854 aa19.8■□□□□ 0.76
TPM1-205ENST00000357980 PRPF3O43395 683 aaKnown RBP19.8■□□□□ 0.76
TPM1-205ENST00000357980 DDNO94850 711 aaPredicted RBP19.8■□□□□ 0.76
TPM1-205ENST00000357980 ABCB5Q2M3G0 1257 aa19.8■□□□□ 0.76
TPM1-205ENST00000357980 OTUD7BQ6GQQ9 843 aa19.8■□□□□ 0.76
TPM1-205ENST00000357980 STAG2Q8N3U4 1231 aa19.8■□□□□ 0.76
TPM1-205ENST00000357980 WASF1Q92558 559 aa19.8■□□□□ 0.76
TPM1-205ENST00000357980 ZSCAN16Q9H4T2 348 aaPredicted RBP19.8■□□□□ 0.76
TPM1-205ENST00000357980 SCAF8Q9UPN6 1271 aaKnown RBP19.8■□□□□ 0.76
TPM1-205ENST00000357980 GDF11O95390 407 aa19.79■□□□□ 0.76
TPM1-205ENST00000357980 EPS15P42566 896 aa19.79■□□□□ 0.76
TPM1-205ENST00000357980 JAG1P78504 1218 aa19.79■□□□□ 0.76
TPM1-205ENST00000357980 PKN1Q16512 942 aa19.79■□□□□ 0.76
TPM1-205ENST00000357980 RASGRP2Q7LDG7 609 aa19.79■□□□□ 0.76
TPM1-205ENST00000357980 KANSL2Q9H9L4 492 aa19.79■□□□□ 0.76
TPM1-205ENST00000357980 CLIP2Q9UDT6 1046 aa19.79■□□□□ 0.76
TPM1-205ENST00000357980 SNHG28P0DPA3 235 aa19.79■□□□□ 0.76
TPM1-205ENST00000357980 GNAQP50148 359 aa19.79■□□□□ 0.76
TPM1-205ENST00000357980 SEPT2Q15019 361 aa19.79■□□□□ 0.76
TPM1-205ENST00000357980 LRRC47Q8N1G4 583 aaKnown RBP19.79■□□□□ 0.76
TPM1-205ENST00000357980 NYAP2Q9P242 653 aa19.79■□□□□ 0.76
TPM1-205ENST00000357980 ATAD5Q96QE3 1844 aa19.78■□□□□ 0.76
TPM1-205ENST00000357980 PDHBP11177 359 aa19.78■□□□□ 0.76
TPM1-205ENST00000357980 DNM1Q05193 864 aaKnown RBP19.78■□□□□ 0.76
TPM1-205ENST00000357980 GPR162Q16538 588 aa19.78■□□□□ 0.76
TPM1-205ENST00000357980 KRT40Q6A162 431 aa19.78■□□□□ 0.76
TPM1-205ENST00000357980 SIAH1Q8IUQ4 282 aa19.78■□□□□ 0.76
TPM1-205ENST00000357980 MKL1Q969V6 931 aa19.78■□□□□ 0.76
TPM1-205ENST00000357980 LMBRD1Q9NUN5 540 aa19.78■□□□□ 0.76
TPM1-205ENST00000357980 V9GY48 417 aaPredicted RBP19.78■□□□□ 0.76
TPM1-205ENST00000357980 GH2P01242 217 aa19.77■□□□□ 0.76
TPM1-205ENST00000357980 PTMSP20962 102 aa19.77■□□□□ 0.76
TPM1-205ENST00000357980 HIRAP54198 1017 aaPredicted RBP19.77■□□□□ 0.76
TPM1-205ENST00000357980 SLC35G1Q2M3R5 365 aa19.77■□□□□ 0.76
TPM1-205ENST00000357980 FAM173BQ6P4H8 233 aa19.77■□□□□ 0.76
TPM1-205ENST00000357980 DEFB129Q9H1M3 183 aa19.77■□□□□ 0.76
TPM1-205ENST00000357980 MTMR7Q9Y216 660 aa19.77■□□□□ 0.76
TPM1-205ENST00000357980 CNPY2Q9Y2B0 182 aa19.77■□□□□ 0.76
TPM1-205ENST00000357980 USP17L5A8MUK1 530 aa19.76■□□□□ 0.75
TPM1-205ENST00000357980 PARP1P09874 1014 aaKnown RBP19.76■□□□□ 0.75
TPM1-205ENST00000357980 EEF2P13639 858 aaKnown RBP19.76■□□□□ 0.75
TPM1-205ENST00000357980 AKAP17AQ02040 695 aaKnown RBP19.76■□□□□ 0.75
TPM1-205ENST00000357980 ICA1Q05084 483 aa19.76■□□□□ 0.75
TPM1-205ENST00000357980 USP17L2Q6R6M4 530 aa19.76■□□□□ 0.75
TPM1-205ENST00000357980 MIGA2Q7L4E1 593 aa19.76■□□□□ 0.75
TPM1-205ENST00000357980 TMEM87AQ8NBN3 555 aa19.76■□□□□ 0.75
TPM1-205ENST00000357980 LZTS2Q9BRK4 669 aa19.76■□□□□ 0.75
TPM1-205ENST00000357980 CYTH3O43739 400 aa19.76■□□□□ 0.75
TPM1-205ENST00000357980 ANGEL2Q5VTE6 544 aaKnown RBP19.76■□□□□ 0.75
TPM1-205ENST00000357980 APOBEC3FQ8IUX4 373 aaKnown RBP19.76■□□□□ 0.75
TPM1-205ENST00000357980 SHISA4Q96DD7 197 aa19.76■□□□□ 0.75
TPM1-205ENST00000357980 POLR2AP24928 1970 aaKnown RBP19.75■□□□□ 0.75
TPM1-205ENST00000357980 hCG_1642624A0A1W2PR95 340 aa19.75■□□□□ 0.75
TPM1-205ENST00000357980 KIF23Q02241 960 aaPredicted RBP19.75■□□□□ 0.75
TPM1-205ENST00000357980 TRIM29Q14134 588 aa19.75■□□□□ 0.75
TPM1-205ENST00000357980 SPZ1Q9BXG8 430 aa19.75■□□□□ 0.75
TPM1-205ENST00000357980 GDPD2Q9HCC8 539 aa19.75■□□□□ 0.75
TPM1-205ENST00000357980 CABP5Q9NP86 173 aa19.75■□□□□ 0.75
TPM1-205ENST00000357980 RBM27Q9P2N5 1060 aaKnown RBP19.75■□□□□ 0.75
TPM1-205ENST00000357980 ZC3H4Q9UPT8 1303 aaKnown RBP19.74■□□□□ 0.75
TPM1-205ENST00000357980 KLRF2D3W0D1 207 aa19.74■□□□□ 0.75
TPM1-205ENST00000357980 GOLGA8HP0CJ92 632 aa19.74■□□□□ 0.75
TPM1-205ENST00000357980 ASPRV1Q53RT3 343 aa19.74■□□□□ 0.75
TPM1-205ENST00000357980 ADARB2Q9NS39 739 aaKnown RBP19.74■□□□□ 0.75
TPM1-205ENST00000357980 GGA3Q9NZ52 723 aa19.74■□□□□ 0.75
TPM1-205ENST00000357980 PHF20L1A8MW92 1017 aa19.74■□□□□ 0.75
TPM1-205ENST00000357980 KIF28PB7ZC32 967 aa19.74■□□□□ 0.75
TPM1-205ENST00000357980 GRIN3BO60391 1043 aa19.74■□□□□ 0.75
TPM1-205ENST00000357980 PRPF40AO75400 957 aaKnown RBP19.74■□□□□ 0.75
TPM1-205ENST00000357980 MMP1P03956 469 aa19.74■□□□□ 0.75
TPM1-205ENST00000357980 SMARCA1P28370 1054 aa19.74■□□□□ 0.75
TPM1-205ENST00000357980 LMOD1P29536 600 aaPredicted RBP19.74■□□□□ 0.75
TPM1-205ENST00000357980 KRT85P78386 507 aa19.74■□□□□ 0.75
TPM1-205ENST00000357980 ATP2B2Q01814 1243 aa19.74■□□□□ 0.75
TPM1-205ENST00000357980 PFKFB3Q16875 520 aaPredicted RBP19.74■□□□□ 0.75
TPM1-205ENST00000357980 L3MBTL3Q96JM7 780 aaPredicted RBP19.74■□□□□ 0.75
TPM1-205ENST00000357980 ZBTB21Q9ULJ3 1066 aa19.74■□□□□ 0.75
TPM1-205ENST00000357980 SCG2P13521 617 aa19.73■□□□□ 0.75
TPM1-205ENST00000357980 CAP2P40123 477 aa19.73■□□□□ 0.75
TPM1-205ENST00000357980 ZNF543Q08ER8 600 aa19.73■□□□□ 0.75
TPM1-205ENST00000357980 BRAPQ7Z569 592 aa19.73■□□□□ 0.75
TPM1-205ENST00000357980 SYNPO2Q9UMS6 1093 aa19.73■□□□□ 0.75
TPM1-205ENST00000357980 PITPNM2Q9BZ72 1349 aa19.72■□□□□ 0.75
TPM1-205ENST00000357980 TRAK2O60296 914 aa19.72■□□□□ 0.75
TPM1-205ENST00000357980 NCLP19338 710 aaKnown RBP19.72■□□□□ 0.75
TPM1-205ENST00000357980 U2AF2P26368 475 aaKnown RBP eCLIP19.72■□□□□ 0.754e-8■■■■■ 35.5
TPM1-205ENST00000357980 USP48Q86UV5 1035 aa19.72■□□□□ 0.75
TPM1-205ENST00000357980 KCNJ14Q9UNX9 436 aa19.72■□□□□ 0.75
TPM1-205ENST00000357980 FIBPO43427 364 aa19.72■□□□□ 0.75
TPM1-205ENST00000357980 VEGFAP15692 232 aaPredicted RBP19.72■□□□□ 0.75
TPM1-205ENST00000357980 NBPF12Q5TAG4 269 aaPredicted RBP19.72■□□□□ 0.75
TPM1-205ENST00000357980 GMCL1P1Q8NEA9 526 aa19.72■□□□□ 0.75
TPM1-205ENST00000357980 CPVLQ9H3G5 476 aa19.72■□□□□ 0.75
TPM1-205ENST00000357980 VPS54Q9P1Q0 977 aa19.72■□□□□ 0.75
TPM1-205ENST00000357980 FRMPD2Q68DX3 1309 aaPredicted RBP19.71■□□□□ 0.75
TPM1-205ENST00000357980 XBP1P17861 261 aa19.71■□□□□ 0.75
TPM1-205ENST00000357980 DPY19L2Q6NUT2 758 aa19.71■□□□□ 0.75
TPM1-205ENST00000357980 PHF20Q9BVI0 1012 aa19.71■□□□□ 0.75
TPM1-205ENST00000357980 RIOX1Q9H6W3 641 aa19.71■□□□□ 0.75
TPM1-205ENST00000357980 PPP2R3BQ9Y5P8 575 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms