RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 EHD4Q9H223 541 aa10.6□□□□□ -0.71
SMG6-202ENST00000354901 CABP5Q9NP86 173 aa10.6□□□□□ -0.71
SMG6-202ENST00000354901 SERTAD1Q9UHV2 236 aa10.6□□□□□ -0.71
SMG6-202ENST00000354901 A0A087WUV0 522 aaPredicted RBP10.6□□□□□ -0.71
SMG6-202ENST00000354901 TOP1P11387 765 aaKnown RBP10.6□□□□□ -0.71
SMG6-202ENST00000354901 CYP7A1P22680 504 aa10.6□□□□□ -0.71
SMG6-202ENST00000354901 ARID4AP29374 1257 aaPredicted RBP10.6□□□□□ -0.71
SMG6-202ENST00000354901 CASP1P29466 404 aa10.6□□□□□ -0.71
SMG6-202ENST00000354901 PEX19P40855 299 aa10.6□□□□□ -0.71
SMG6-202ENST00000354901 CHMP4BP1P59074 171 aa10.6□□□□□ -0.71
SMG6-202ENST00000354901 SARNPP82979 210 aaKnown RBP10.6□□□□□ -0.71
SMG6-202ENST00000354901 ACTN3Q08043 901 aaPredicted RBP10.6□□□□□ -0.71
SMG6-202ENST00000354901 FKBP15Q5T1M5 1219 aa10.6□□□□□ -0.71
SMG6-202ENST00000354901 KRI1Q8N9T8 703 aaKnown RBP10.6□□□□□ -0.71
SMG6-202ENST00000354901 HSD3B7Q9H2F3 369 aa10.6□□□□□ -0.71
SMG6-202ENST00000354901 IMPACTQ9P2X3 320 aa10.6□□□□□ -0.71
SMG6-202ENST00000354901 ZNF831Q5JPB2 1677 aa10.6□□□□□ -0.71
SMG6-202ENST00000354901 CALRP27797 417 aaKnown RBP10.59□□□□□ -0.71
SMG6-202ENST00000354901 NF2P35240 595 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 AFMP43652 599 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 BICDL1Q6ZP65 573 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 SMIM5Q71RC9 77 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 UBAC1Q9BSL1 405 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 NACAP1Q9BZK3 213 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 SPATA31A5Q5VU36 1347 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 SPATA31A7Q8IWB4 1347 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 AKAP11Q9UKA4 1901 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 CUTAO60888 179 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 BMP6P22004 513 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 USP8P40818 1118 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 GYG1P46976 350 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 TOB1P50616 345 aaPredicted RBP10.59□□□□□ -0.71
SMG6-202ENST00000354901 RESP18Q5W5W9 173 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 MKRN1Q9UHC7 482 aaKnown RBP10.59□□□□□ -0.71
SMG6-202ENST00000354901 HPSEQ9Y251 543 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 DOT1LQ8TEK3 1739 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 PSDA5PKW4 1024 aaPredicted RBP10.59□□□□□ -0.71
SMG6-202ENST00000354901 MYO1FO00160 1098 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 MPHOSPH10O00566 681 aaKnown RBP10.59□□□□□ -0.71
SMG6-202ENST00000354901 COBLO75128 1261 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 PPP6R2O75170 966 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 ERLIN1O75477 346 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 INPP5BP32019 993 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 KCNQ4P56696 695 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 STX17P56962 302 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 STAMQ92783 540 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 ACBD3Q9H3P7 528 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 VPS54Q9P1Q0 977 aa10.59□□□□□ -0.71
SMG6-202ENST00000354901 NIP7Q9Y221 180 aaKnown RBP eCLIP10.59□□□□□ -0.71
SMG6-202ENST00000354901 IGHMBP2P38935 993 aaKnown RBP10.58□□□□□ -0.72
SMG6-202ENST00000354901 ADKP55263 362 aaKnown RBP10.58□□□□□ -0.72
SMG6-202ENST00000354901 SEMA3FQ13275 785 aa10.58□□□□□ -0.72
SMG6-202ENST00000354901 KIF4BQ2VIQ3 1234 aa10.58□□□□□ -0.72
SMG6-202ENST00000354901 SGMS1Q86VZ5 419 aa10.58□□□□□ -0.72
SMG6-202ENST00000354901 AFAP1L1Q8TED9 768 aa10.58□□□□□ -0.72
SMG6-202ENST00000354901 PNKPQ96T60 521 aa10.58□□□□□ -0.72
SMG6-202ENST00000354901 BPIFA3Q9BQP9 254 aa10.58□□□□□ -0.72
SMG6-202ENST00000354901 TUBE1Q9UJT0 475 aa10.58□□□□□ -0.72
SMG6-202ENST00000354901 JAG2Q9Y219 1238 aa10.58□□□□□ -0.72
SMG6-202ENST00000354901 NFE2L3Q9Y4A8 694 aa10.58□□□□□ -0.72
SMG6-202ENST00000354901 KIF1CO43896 1103 aaKnown RBP10.58□□□□□ -0.72
SMG6-202ENST00000354901 RNF40O75150 1001 aa10.58□□□□□ -0.72
SMG6-202ENST00000354901 MMP1P03956 469 aa10.58□□□□□ -0.72
SMG6-202ENST00000354901 FGFR2P21802 821 aa10.58□□□□□ -0.72
SMG6-202ENST00000354901 TXLNAP40222 546 aa10.58□□□□□ -0.72
SMG6-202ENST00000354901 ADGRA1Q86SQ6 560 aa10.58□□□□□ -0.72
SMG6-202ENST00000354901 SUGP1Q8IWZ8 645 aaKnown RBP10.58□□□□□ -0.72
SMG6-202ENST00000354901 KRT23Q9C075 422 aa10.58□□□□□ -0.72
SMG6-202ENST00000354901 FAM107BQ9H098 131 aa10.58□□□□□ -0.72
SMG6-202ENST00000354901 MED4Q9NPJ6 270 aa10.58□□□□□ -0.72
SMG6-202ENST00000354901 FAM169AQ9Y6X4 670 aa10.58□□□□□ -0.72
SMG6-202ENST00000354901 SPATA31A6Q5VVP1 1343 aa10.58□□□□□ -0.72
SMG6-202ENST00000354901 PHLPP2Q6ZVD8 1323 aa10.58□□□□□ -0.72
SMG6-202ENST00000354901 WDR19Q8NEZ3 1342 aa10.58□□□□□ -0.72
SMG6-202ENST00000354901 CCDC196A0A1B0GTZ2 297 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 EBAG9O00559 213 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 ATP8B1O43520 1251 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 PPFIA4O75335 1185 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 ZMYND10O75800 440 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 ADAMTS2O95450 1211 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 FMNL1O95466 1100 aaPredicted RBP10.57□□□□□ -0.72
SMG6-202ENST00000354901 IFNAR1P17181 557 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 FMR1Q06787 632 aaKnown RBP eCLIP10.57□□□□□ -0.72
SMG6-202ENST00000354901 RNF187Q5TA31 235 aaPredicted RBP10.57□□□□□ -0.72
SMG6-202ENST00000354901 TRIM65Q6PJ69 517 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 ZNF654Q8IZM8 581 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 CPLX3Q8WVH0 158 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 PSD3Q9NYI0 1048 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 MROH5Q6ZUA9 1318 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 ABCC12Q96J65 1359 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 SPEF2Q9C093 1822 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 RREB1Q92766 1687 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 IKBKBO14920 756 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 LIFRP42702 1097 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 POSTNQ15063 836 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 CCDC24Q8N4L8 307 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 CEP89Q96ST8 783 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 UBXN6Q9BZV1 441 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 CNNM2Q9H8M5 875 aa10.57□□□□□ -0.72
SMG6-202ENST00000354901 PPP2R2CQ9Y2T4 447 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms