RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 hCG_1642624A0A1W2PR95 340 aa23.8■■□□□ 1.4
TRIM4-202ENST00000354241 LRRC47Q8N1G4 583 aaKnown RBP23.8■■□□□ 1.4
TRIM4-202ENST00000354241 ATP2B2Q01814 1243 aa23.79■■□□□ 1.4
TRIM4-202ENST00000354241 HERC5Q9UII4 1024 aaKnown RBP23.79■■□□□ 1.4
TRIM4-202ENST00000354241 BAZ2BQ9UIF8 2168 aaKnown RBP23.79■■□□□ 1.4
TRIM4-202ENST00000354241 GDF11O95390 407 aa23.78■■□□□ 1.4
TRIM4-202ENST00000354241 TNNI2P48788 182 aa23.78■■□□□ 1.4
TRIM4-202ENST00000354241 GNAQP50148 359 aa23.78■■□□□ 1.4
TRIM4-202ENST00000354241 CSPP1Q1MSJ5 1256 aa23.78■■□□□ 1.4
TRIM4-202ENST00000354241 SHROOM1Q2M3G4 852 aaPredicted RBP23.78■■□□□ 1.4
TRIM4-202ENST00000354241 KIF4BQ2VIQ3 1234 aa23.78■■□□□ 1.4
TRIM4-202ENST00000354241 RASGRP2Q7LDG7 609 aa23.78■■□□□ 1.4
TRIM4-202ENST00000354241 TMEM87AQ8NBN3 555 aa23.78■■□□□ 1.4
TRIM4-202ENST00000354241 TFIP11Q9UBB9 837 aaKnown RBP23.78■■□□□ 1.4
TRIM4-202ENST00000354241 H7C1D1 291 aa23.78■■□□□ 1.4
TRIM4-202ENST00000354241 ABCB5Q2M3G0 1257 aa23.78■■□□□ 1.4
TRIM4-202ENST00000354241 PARP1P09874 1014 aaKnown RBP23.77■■□□□ 1.4
TRIM4-202ENST00000354241 GOLGA8HP0CJ92 632 aa23.77■■□□□ 1.4
TRIM4-202ENST00000354241 KIF23Q02241 960 aaPredicted RBP23.77■■□□□ 1.4
TRIM4-202ENST00000354241 PKN1Q16512 942 aa23.77■■□□□ 1.4
TRIM4-202ENST00000354241 PPP4R3BQ5MIZ7 849 aa23.77■■□□□ 1.4
TRIM4-202ENST00000354241 CDAN1Q8IWY9 1227 aa23.77■■□□□ 1.4
TRIM4-202ENST00000354241 GPC2Q8N158 579 aa23.77■■□□□ 1.4
TRIM4-202ENST00000354241 PIBF1Q8WXW3 757 aa23.77■■□□□ 1.4
TRIM4-202ENST00000354241 RNF181Q9P0P0 153 aa23.77■■□□□ 1.4
TRIM4-202ENST00000354241 SCAF8Q9UPN6 1271 aaKnown RBP23.77■■□□□ 1.4
TRIM4-202ENST00000354241 PALM3A6NDB9 673 aaPredicted RBP23.76■■□□□ 1.39
TRIM4-202ENST00000354241 KIF28PB7ZC32 967 aa23.76■■□□□ 1.39
TRIM4-202ENST00000354241 GNL2Q13823 731 aaKnown RBP23.76■■□□□ 1.39
TRIM4-202ENST00000354241 TNFAIP1Q13829 316 aa23.76■■□□□ 1.39
TRIM4-202ENST00000354241 USP17L2Q6R6M4 530 aa23.76■■□□□ 1.39
TRIM4-202ENST00000354241 TMEM179Q6ZVK1 233 aa23.76■■□□□ 1.39
TRIM4-202ENST00000354241 KCNJ14Q9UNX9 436 aa23.76■■□□□ 1.39
TRIM4-202ENST00000354241 ASTN2O75129 1339 aaPredicted RBP23.75■■□□□ 1.39
TRIM4-202ENST00000354241 USP17L5A8MUK1 530 aa23.75■■□□□ 1.39
TRIM4-202ENST00000354241 GADD45BO75293 160 aaPredicted RBP23.75■■□□□ 1.39
TRIM4-202ENST00000354241 XBP1P17861 261 aa23.75■■□□□ 1.39
TRIM4-202ENST00000354241 RASA3Q14644 834 aa23.75■■□□□ 1.39
TRIM4-202ENST00000354241 SEPT2Q15019 361 aa23.75■■□□□ 1.39
TRIM4-202ENST00000354241 KLHL40Q2TBA0 621 aa23.75■■□□□ 1.39
TRIM4-202ENST00000354241 BRAPQ7Z569 592 aa23.75■■□□□ 1.39
TRIM4-202ENST00000354241 KANSL2Q9H9L4 492 aa23.75■■□□□ 1.39
TRIM4-202ENST00000354241 KLRF2D3W0D1 207 aa23.74■■□□□ 1.39
TRIM4-202ENST00000354241 MMP1P03956 469 aa23.74■■□□□ 1.39
TRIM4-202ENST00000354241 RRP1BQ14684 758 aaKnown RBP23.74■■□□□ 1.39
TRIM4-202ENST00000354241 ZNF396Q96N95 335 aaPredicted RBP23.74■■□□□ 1.39
TRIM4-202ENST00000354241 LZTS2Q9BRK4 669 aa23.74■■□□□ 1.39
TRIM4-202ENST00000354241 GZF1Q9H116 711 aaPredicted RBP23.74■■□□□ 1.39
TRIM4-202ENST00000354241 CABP5Q9NP86 173 aa23.74■■□□□ 1.39
TRIM4-202ENST00000354241 GPRC5DQ9NZD1 345 aa23.74■■□□□ 1.39
TRIM4-202ENST00000354241 VPS54Q9P1Q0 977 aa23.74■■□□□ 1.39
TRIM4-202ENST00000354241 HACL1Q9UJ83 578 aa23.74■■□□□ 1.39
TRIM4-202ENST00000354241 PDHBP11177 359 aa23.74■■□□□ 1.39
TRIM4-202ENST00000354241 SAFBQ15424 915 aaKnown RBP eCLIP23.74■■□□□ 1.39
TRIM4-202ENST00000354241 TPRNQ4KMQ1 711 aa23.74■■□□□ 1.39
TRIM4-202ENST00000354241 GPT2Q8TD30 523 aa23.74■■□□□ 1.39
TRIM4-202ENST00000354241 SPATA32Q96LK8 384 aa23.74■■□□□ 1.39
TRIM4-202ENST00000354241 SCAND2PQ9GZW5 306 aaPredicted RBP23.74■■□□□ 1.39
TRIM4-202ENST00000354241 CFAP45Q9UL16 551 aa23.74■■□□□ 1.39
TRIM4-202ENST00000354241 GH2P01242 217 aa23.73■■□□□ 1.39
TRIM4-202ENST00000354241 EEF2P13639 858 aaKnown RBP23.73■■□□□ 1.39
TRIM4-202ENST00000354241 CEBPZQ03701 1054 aaKnown RBP23.73■■□□□ 1.39
TRIM4-202ENST00000354241 ICA1Q05084 483 aa23.73■■□□□ 1.39
TRIM4-202ENST00000354241 MIGA2Q7L4E1 593 aa23.73■■□□□ 1.39
TRIM4-202ENST00000354241 RBM27Q9P2N5 1060 aaKnown RBP23.73■■□□□ 1.39
TRIM4-202ENST00000354241 PGAP2Q9UHJ9 254 aa23.73■■□□□ 1.39
TRIM4-202ENST00000354241 FRMPD2Q68DX3 1309 aaPredicted RBP23.73■■□□□ 1.39
TRIM4-202ENST00000354241 SCG2P13521 617 aa23.72■■□□□ 1.39
TRIM4-202ENST00000354241 NYAP2Q9P242 653 aa23.72■■□□□ 1.39
TRIM4-202ENST00000354241 TBC1D12O60347 775 aa23.72■■□□□ 1.39
TRIM4-202ENST00000354241 JAG1P78504 1218 aa23.72■■□□□ 1.39
TRIM4-202ENST00000354241 PFKFB3Q16875 520 aaPredicted RBP23.72■■□□□ 1.39
TRIM4-202ENST00000354241 TRPM4Q8TD43 1214 aa23.72■■□□□ 1.39
TRIM4-202ENST00000354241 LEO1Q8WVC0 666 aaPredicted RBP23.72■■□□□ 1.39
TRIM4-202ENST00000354241 CYTH3O43739 400 aa23.71■■□□□ 1.39
TRIM4-202ENST00000354241 MBD3O95983 291 aa23.71■■□□□ 1.39
TRIM4-202ENST00000354241 SLC35G1Q2M3R5 365 aa23.71■■□□□ 1.39
TRIM4-202ENST00000354241 ASPRV1Q53RT3 343 aa23.71■■□□□ 1.39
TRIM4-202ENST00000354241 MYSM1Q5VVJ2 828 aa23.71■■□□□ 1.39
TRIM4-202ENST00000354241 C9orf131Q5VYM1 1079 aa23.71■■□□□ 1.39
TRIM4-202ENST00000354241 ATL3Q6DD88 541 aa23.71■■□□□ 1.39
TRIM4-202ENST00000354241 DIS3L2Q8IYB7 885 aaKnown RBP23.71■■□□□ 1.39
TRIM4-202ENST00000354241 FTOQ9C0B1 505 aaKnown RBP eCLIP23.71■■□□□ 1.39
TRIM4-202ENST00000354241 CPVLQ9H3G5 476 aa23.71■■□□□ 1.39
TRIM4-202ENST00000354241 DDNO94850 711 aaPredicted RBP23.71■■□□□ 1.39
TRIM4-202ENST00000354241 SHISA4Q96DD7 197 aa23.71■■□□□ 1.39
TRIM4-202ENST00000354241 USP28Q96RU2 1077 aa23.71■■□□□ 1.39
TRIM4-202ENST00000354241 RAD21O60216 631 aa23.7■■□□□ 1.38
TRIM4-202ENST00000354241 SNHG28P0DPA3 235 aa23.7■■□□□ 1.38
TRIM4-202ENST00000354241 U2AF2P26368 475 aaKnown RBP eCLIP23.7■■□□□ 1.38
TRIM4-202ENST00000354241 EPS15P42566 896 aa23.7■■□□□ 1.38
TRIM4-202ENST00000354241 UBE2HP62256 183 aa23.7■■□□□ 1.38
TRIM4-202ENST00000354241 MKL1Q969V6 931 aa23.7■■□□□ 1.38
TRIM4-202ENST00000354241 SPZ1Q9BXG8 430 aa23.7■■□□□ 1.38
TRIM4-202ENST00000354241 GPCPD1Q9NPB8 672 aa23.7■■□□□ 1.38
TRIM4-202ENST00000354241 ELP1O95163 1332 aa23.7■■□□□ 1.38
TRIM4-202ENST00000354241 UTRNP46939 3433 aa23.69■■□□□ 1.38
TRIM4-202ENST00000354241 BTBD18B2RXH4 712 aa23.69■■□□□ 1.38
TRIM4-202ENST00000354241 PHF20Q9BVI0 1012 aa23.69■■□□□ 1.38
TRIM4-202ENST00000354241 CCDC96Q2M329 555 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms