RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 A0A087WWV3 80 aa19.14■□□□□ 0.65
SAMM50-201ENST00000350028 SMTNL1A8MU46 457 aa19.14■□□□□ 0.65
SAMM50-201ENST00000350028 NLRP5P59047 1200 aa19.14■□□□□ 0.65
SAMM50-201ENST00000350028 NPY5RQ15761 445 aa19.14■□□□□ 0.65
SAMM50-201ENST00000350028 SLC15A2Q16348 729 aa19.14■□□□□ 0.65
SAMM50-201ENST00000350028 DPCR1Q3MIW9 517 aa19.14■□□□□ 0.65
SAMM50-201ENST00000350028 NEDD1Q8NHV4 660 aa19.14■□□□□ 0.65
SAMM50-201ENST00000350028 MASTLQ96GX5 879 aa19.14■□□□□ 0.65
SAMM50-201ENST00000350028 MYH1P12882 1939 aa19.13■□□□□ 0.65
SAMM50-201ENST00000350028 USP17L3A6NCW0 530 aa19.13■□□□□ 0.65
SAMM50-201ENST00000350028 USP17L4A6NCW7 530 aa19.13■□□□□ 0.65
SAMM50-201ENST00000350028 ATP2B1P20020 1258 aa19.13■□□□□ 0.65
SAMM50-201ENST00000350028 CALML3P27482 149 aa19.13■□□□□ 0.65
SAMM50-201ENST00000350028 LONRF3Q496Y0 759 aa19.13■□□□□ 0.65
SAMM50-201ENST00000350028 USP17L1Q7RTZ2 530 aa19.13■□□□□ 0.65
SAMM50-201ENST00000350028 SLC44A5Q8NCS7 719 aa19.13■□□□□ 0.65
SAMM50-201ENST00000350028 LZTS2Q9BRK4 669 aa19.13■□□□□ 0.65
SAMM50-201ENST00000350028 PDGFDQ9GZP0 370 aaPredicted RBP19.13■□□□□ 0.65
SAMM50-201ENST00000350028 DAGLAQ9Y4D2 1042 aa19.13■□□□□ 0.65
SAMM50-201ENST00000350028 QSER1Q2KHR3 1735 aa19.13■□□□□ 0.65
SAMM50-201ENST00000350028 FOCADQ5VW36 1801 aa19.12■□□□□ 0.65
SAMM50-201ENST00000350028 MMP10P09238 476 aa19.12■□□□□ 0.65
SAMM50-201ENST00000350028 TRAPPC10P48553 1259 aa19.12■□□□□ 0.65
SAMM50-201ENST00000350028 TPM4P67936 248 aa19.12■□□□□ 0.65
SAMM50-201ENST00000350028 DPP8Q6V1X1 898 aaPredicted RBP19.12■□□□□ 0.65
SAMM50-201ENST00000350028 NAP1L5Q96NT1 182 aaPredicted RBP19.12■□□□□ 0.65
SAMM50-201ENST00000350028 EYA3Q99504 573 aa19.12■□□□□ 0.65
SAMM50-201ENST00000350028 TMEM47Q9BQJ4 181 aa19.12■□□□□ 0.65
SAMM50-201ENST00000350028 FAM205CA6NFA0 338 aa19.11■□□□□ 0.65
SAMM50-201ENST00000350028 BIN1O00499 593 aa19.11■□□□□ 0.65
SAMM50-201ENST00000350028 EARS2Q5JPH6 523 aaKnown RBP19.11■□□□□ 0.65
SAMM50-201ENST00000350028 KANK3Q6NY19 840 aa19.11■□□□□ 0.65
SAMM50-201ENST00000350028 FAM177A1Q8N128 213 aaPredicted RBP19.11■□□□□ 0.65
SAMM50-201ENST00000350028 FBXW7Q969H0 707 aa19.11■□□□□ 0.65
SAMM50-201ENST00000350028 FERMT2Q96AC1 680 aa19.11■□□□□ 0.65
SAMM50-201ENST00000350028 CLIP2Q9UDT6 1046 aa19.11■□□□□ 0.65
SAMM50-201ENST00000350028 MAD2L2Q9UI95 211 aa19.11■□□□□ 0.65
SAMM50-201ENST00000350028 GRIN1Q05586 938 aa19.11■□□□□ 0.65
SAMM50-201ENST00000350028 TTC38Q5R3I4 469 aa19.11■□□□□ 0.65
SAMM50-201ENST00000350028 METTL16Q86W50 562 aaKnown RBP19.11■□□□□ 0.65
SAMM50-201ENST00000350028 PALM3A6NDB9 673 aaPredicted RBP19.1■□□□□ 0.65
SAMM50-201ENST00000350028 IKBKBO14920 756 aa19.1■□□□□ 0.65
SAMM50-201ENST00000350028 MDM2Q00987 491 aaPredicted RBP19.1■□□□□ 0.65
SAMM50-201ENST00000350028 PNOCQ13519 176 aa19.1■□□□□ 0.65
SAMM50-201ENST00000350028 CCDC186Q7Z3E2 898 aa19.1■□□□□ 0.65
SAMM50-201ENST00000350028 STAG2Q8N3U4 1231 aa19.1■□□□□ 0.65
SAMM50-201ENST00000350028 SNED1Q8TER0 1413 aa19.1■□□□□ 0.65
SAMM50-201ENST00000350028 CSRNP2Q9H175 543 aa19.1■□□□□ 0.65
SAMM50-201ENST00000350028 KCNF1Q9H3M0 494 aa19.1■□□□□ 0.65
SAMM50-201ENST00000350028 PTGS1P23219 599 aa19.09■□□□□ 0.65
SAMM50-201ENST00000350028 NOLC1Q14978 699 aaKnown RBP eCLIP19.09■□□□□ 0.65
SAMM50-201ENST00000350028 SPECC1Q5M775 1068 aa19.09■□□□□ 0.65
SAMM50-201ENST00000350028 CCDC34Q96HJ3 373 aa19.09■□□□□ 0.65
SAMM50-201ENST00000350028 STX8Q9UNK0 236 aa19.09■□□□□ 0.65
SAMM50-201ENST00000350028 COL11A2P13942 1736 aaPredicted RBP19.09■□□□□ 0.65
SAMM50-201ENST00000350028 G3V3G9 751 aa19.08■□□□□ 0.65
SAMM50-201ENST00000350028 POLR2DO15514 142 aaKnown RBP19.08■□□□□ 0.65
SAMM50-201ENST00000350028 TERF1P54274 439 aa19.08■□□□□ 0.65
SAMM50-201ENST00000350028 DCAF8Q5TAQ9 597 aa19.08■□□□□ 0.65
SAMM50-201ENST00000350028 GALNT17Q6IS24 598 aa19.08■□□□□ 0.65
SAMM50-201ENST00000350028 BLIDQ8IZY5 108 aa19.08■□□□□ 0.65
SAMM50-201ENST00000350028 KIAA1524Q8TCG1 905 aa19.08■□□□□ 0.65
SAMM50-201ENST00000350028 STK32BQ9NY57 414 aa19.08■□□□□ 0.65
SAMM50-201ENST00000350028 SERTAD1Q9UHV2 236 aa19.08■□□□□ 0.65
SAMM50-201ENST00000350028 PCDHA5Q9Y5H7 936 aa19.08■□□□□ 0.65
SAMM50-201ENST00000350028 TOP1P11387 765 aaKnown RBP19.08■□□□□ 0.64
SAMM50-201ENST00000350028 SMARCA1P28370 1054 aa19.08■□□□□ 0.64
SAMM50-201ENST00000350028 NOVP48745 357 aa19.08■□□□□ 0.64
SAMM50-201ENST00000350028 ATP2C1P98194 919 aaPredicted RBP19.08■□□□□ 0.64
SAMM50-201ENST00000350028 ZNF174Q15697 407 aa19.08■□□□□ 0.64
SAMM50-201ENST00000350028 OLFM4Q6UX06 510 aa19.08■□□□□ 0.64
SAMM50-201ENST00000350028 CERS5Q8N5B7 392 aa19.08■□□□□ 0.64
SAMM50-201ENST00000350028 CCDC148Q8NFR7 591 aa19.08■□□□□ 0.64
SAMM50-201ENST00000350028 SPTLC3Q9NUV7 552 aa19.08■□□□□ 0.64
SAMM50-201ENST00000350028 PCDHA4Q9UN74 947 aa19.08■□□□□ 0.64
SAMM50-201ENST00000350028 TTF2Q9UNY4 1162 aaKnown RBP19.08■□□□□ 0.64
SAMM50-201ENST00000350028 POSTNQ15063 836 aa19.07■□□□□ 0.64
SAMM50-201ENST00000350028 DOK7Q18PE1 504 aa19.07■□□□□ 0.64
SAMM50-201ENST00000350028 STYK1Q6J9G0 422 aa19.07■□□□□ 0.64
SAMM50-201ENST00000350028 HHIPL2Q6UWX4 724 aa19.07■□□□□ 0.64
SAMM50-201ENST00000350028 FOXP4Q8IVH2 680 aaPredicted RBP19.07■□□□□ 0.64
SAMM50-201ENST00000350028 SPZ1Q9BXG8 430 aa19.07■□□□□ 0.64
SAMM50-201ENST00000350028 VEGFAP15692 232 aaPredicted RBP19.06■□□□□ 0.64
SAMM50-201ENST00000350028 NCAPHQ15003 741 aa19.06■□□□□ 0.64
SAMM50-201ENST00000350028 NT5DC1Q5TFE4 455 aa19.06■□□□□ 0.64
SAMM50-201ENST00000350028 PIK3AP1Q6ZUJ8 805 aa19.06■□□□□ 0.64
SAMM50-201ENST00000350028 C2CD5Q86YS7 1000 aa19.06■□□□□ 0.64
SAMM50-201ENST00000350028 DAGLBQ8NCG7 672 aa19.06■□□□□ 0.64
SAMM50-201ENST00000350028 ZNF622Q969S3 477 aaKnown RBP eCLIP19.06■□□□□ 0.64
SAMM50-201ENST00000350028 NRBP1Q9UHY1 535 aa19.06■□□□□ 0.64
SAMM50-201ENST00000350028 PLIN4Q96Q06 1357 aa19.06■□□□□ 0.64
SAMM50-201ENST00000350028 KLRF2D3W0D1 207 aa19.05■□□□□ 0.64
SAMM50-201ENST00000350028 ACTN4O43707 911 aaKnown RBP19.05■□□□□ 0.64
SAMM50-201ENST00000350028 NEMFO60524 1076 aa19.05■□□□□ 0.64
SAMM50-201ENST00000350028 NOM1Q5C9Z4 860 aaKnown RBP19.05■□□□□ 0.64
SAMM50-201ENST00000350028 ISM2Q6H9L7 571 aa19.05■□□□□ 0.64
SAMM50-201ENST00000350028 PODNQ7Z5L7 613 aa19.05■□□□□ 0.64
SAMM50-201ENST00000350028 TRIML1Q8N9V2 468 aa19.05■□□□□ 0.64
SAMM50-201ENST00000350028 F8W031 263 aaPredicted RBP19.05■□□□□ 0.64
SAMM50-201ENST00000350028 MYO1BO43795 1136 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms