RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 PLEKHG4Q58EX7 1191 aa6.11□□□□□ -1.43
VCAM1-202ENST00000347652 TTC22Q5TAA0 569 aa6.11□□□□□ -1.43
VCAM1-202ENST00000347652 SUGP1Q8IWZ8 645 aaKnown RBP6.11□□□□□ -1.43
VCAM1-202ENST00000347652 ZNF579Q8NAF0 562 aaKnown RBP6.11□□□□□ -1.43
VCAM1-202ENST00000347652 VPS33BQ9H267 617 aa6.11□□□□□ -1.43
VCAM1-202ENST00000347652 KIAA1024Q9UPX6 916 aa6.11□□□□□ -1.43
VCAM1-202ENST00000347652 LZTS1Q9Y250 596 aa6.11□□□□□ -1.43
VCAM1-202ENST00000347652 MRVI1Q9Y6F6 885 aa6.11□□□□□ -1.43
VCAM1-202ENST00000347652 ZNF646O15015 1829 aaPredicted RBP6.11□□□□□ -1.43
VCAM1-202ENST00000347652 WDR90Q96KV7 1748 aa6.11□□□□□ -1.43
VCAM1-202ENST00000347652 GLRX3O76003 335 aaKnown RBP6.11□□□□□ -1.43
VCAM1-202ENST00000347652 FMNL1O95466 1100 aaPredicted RBP6.11□□□□□ -1.43
VCAM1-202ENST00000347652 IL1R1P14778 569 aa6.11□□□□□ -1.43
VCAM1-202ENST00000347652 GSPT1P15170 499 aaKnown RBP6.11□□□□□ -1.43
VCAM1-202ENST00000347652 EPS15P42566 896 aa6.11□□□□□ -1.43
VCAM1-202ENST00000347652 KCTD2Q14681 263 aa6.11□□□□□ -1.43
VCAM1-202ENST00000347652 NR6A1Q15406 480 aa6.11□□□□□ -1.43
VCAM1-202ENST00000347652 ARMC3Q5W041 872 aa6.11□□□□□ -1.43
VCAM1-202ENST00000347652 DPY19L2Q6NUT2 758 aa6.11□□□□□ -1.43
VCAM1-202ENST00000347652 ZNF804AQ7Z570 1209 aa6.11□□□□□ -1.43
VCAM1-202ENST00000347652 APBA2Q99767 749 aa6.11□□□□□ -1.43
VCAM1-202ENST00000347652 HAUS7Q99871 368 aa6.11□□□□□ -1.43
VCAM1-202ENST00000347652 SCGB1D2O95969 90 aa6.1□□□□□ -1.43
VCAM1-202ENST00000347652 MCAMP43121 646 aa6.1□□□□□ -1.43
VCAM1-202ENST00000347652 GMPSP49915 693 aaPredicted RBP6.1□□□□□ -1.43
VCAM1-202ENST00000347652 EIF6P56537 245 aaKnown RBP6.1□□□□□ -1.43
VCAM1-202ENST00000347652 CLDN10P78369 228 aa6.1□□□□□ -1.43
VCAM1-202ENST00000347652 SCARF1Q14162 830 aa6.1□□□□□ -1.43
VCAM1-202ENST00000347652 PAF1Q8N7H5 531 aa6.1□□□□□ -1.43
VCAM1-202ENST00000347652 TDRD7Q8NHU6 1098 aaKnown RBP6.1□□□□□ -1.43
VCAM1-202ENST00000347652 SH3TC2Q8TF17 1288 aa6.1□□□□□ -1.43
VCAM1-202ENST00000347652 NAP1L4Q99733 375 aaKnown RBP6.1□□□□□ -1.43
VCAM1-202ENST00000347652 COA1Q9GZY4 146 aa6.1□□□□□ -1.43
VCAM1-202ENST00000347652 BOLA2Q9H3K6 86 aa6.1□□□□□ -1.43
VCAM1-202ENST00000347652 DDX41Q9UJV9 622 aaKnown RBP6.1□□□□□ -1.43
VCAM1-202ENST00000347652 CTSHP09668 335 aa6.1□□□□□ -1.43
VCAM1-202ENST00000347652 CDC27P30260 824 aa6.1□□□□□ -1.43
VCAM1-202ENST00000347652 FOXK1P85037 733 aa6.1□□□□□ -1.43
VCAM1-202ENST00000347652 POU5F1Q01860 360 aaKnown RBP6.1□□□□□ -1.43
VCAM1-202ENST00000347652 BRD3Q15059 726 aa6.1□□□□□ -1.43
VCAM1-202ENST00000347652 BMP2KLQ5H9B9 411 aa6.1□□□□□ -1.43
VCAM1-202ENST00000347652 CIAPIN1Q6FI81 312 aa6.1□□□□□ -1.43
VCAM1-202ENST00000347652 PCGF5Q86SE9 256 aa6.1□□□□□ -1.43
VCAM1-202ENST00000347652 VPS37DQ86XT2 251 aa6.1□□□□□ -1.43
VCAM1-202ENST00000347652 ANKMY2Q8IV38 441 aa6.1□□□□□ -1.43
VCAM1-202ENST00000347652 GPC2Q8N158 579 aa6.1□□□□□ -1.43
VCAM1-202ENST00000347652 ZNF408Q9H9D4 720 aa6.1□□□□□ -1.43
VCAM1-202ENST00000347652 NEUROD4Q9HD90 331 aa6.1□□□□□ -1.43
VCAM1-202ENST00000347652 CD209Q9NNX6 404 aa6.1□□□□□ -1.43
VCAM1-202ENST00000347652 CASS4Q9NQ75 786 aa6.1□□□□□ -1.43
VCAM1-202ENST00000347652 HMG20BQ9P0W2 317 aa6.1□□□□□ -1.43
VCAM1-202ENST00000347652 PDS5AQ29RF7 1337 aaKnown RBP6.09□□□□□ -1.43
VCAM1-202ENST00000347652 PRPF3O43395 683 aaKnown RBP6.09□□□□□ -1.43
VCAM1-202ENST00000347652 TSPAN6O43657 245 aa6.09□□□□□ -1.43
VCAM1-202ENST00000347652 RASGRF1Q13972 1273 aa6.09□□□□□ -1.43
VCAM1-202ENST00000347652 SPATA5Q8NB90 893 aa6.09□□□□□ -1.43
VCAM1-202ENST00000347652 JADE2Q9NQC1 790 aa6.09□□□□□ -1.43
VCAM1-202ENST00000347652 HOMER2Q9NSB8 354 aa6.09□□□□□ -1.43
VCAM1-202ENST00000347652 SNTG2Q9NY99 539 aa6.09□□□□□ -1.43
VCAM1-202ENST00000347652 DENND2AQ9ULE3 1009 aa6.09□□□□□ -1.43
VCAM1-202ENST00000347652 COL1A1P02452 1464 aaPredicted RBP6.09□□□□□ -1.43
VCAM1-202ENST00000347652 PSME4Q14997 1843 aa6.09□□□□□ -1.43
VCAM1-202ENST00000347652 G3V3G9 751 aa6.09□□□□□ -1.43
VCAM1-202ENST00000347652 CDC45O75419 566 aa6.09□□□□□ -1.43
VCAM1-202ENST00000347652 CYP2E1P05181 493 aaPredicted RBP6.09□□□□□ -1.43
VCAM1-202ENST00000347652 VEGFAP15692 232 aaPredicted RBP6.09□□□□□ -1.43
VCAM1-202ENST00000347652 SDSP20132 328 aa6.09□□□□□ -1.43
VCAM1-202ENST00000347652 POU3F3P20264 500 aaPredicted RBP6.09□□□□□ -1.43
VCAM1-202ENST00000347652 ZAP70P43403 619 aa6.09□□□□□ -1.43
VCAM1-202ENST00000347652 FMR1Q06787 632 aaKnown RBP eCLIP6.09□□□□□ -1.43
VCAM1-202ENST00000347652 DLK2Q6UY11 383 aa6.09□□□□□ -1.43
VCAM1-202ENST00000347652 SAMD7Q7Z3H4 446 aa6.09□□□□□ -1.43
VCAM1-202ENST00000347652 TRPM4Q8TD43 1214 aa6.09□□□□□ -1.43
VCAM1-202ENST00000347652 TAF1DQ9H5J8 278 aaPredicted RBP6.09□□□□□ -1.43
VCAM1-202ENST00000347652 TAGLN3Q9UI15 199 aa6.09□□□□□ -1.43
VCAM1-202ENST00000347652 SCAF8Q9UPN6 1271 aaKnown RBP6.09□□□□□ -1.43
VCAM1-202ENST00000347652 AKAP11Q9UKA4 1901 aa6.09□□□□□ -1.44
VCAM1-202ENST00000347652 ASTN2O75129 1339 aaPredicted RBP6.08□□□□□ -1.44
VCAM1-202ENST00000347652 TGFB3P10600 412 aa6.08□□□□□ -1.44
VCAM1-202ENST00000347652 HIRAP54198 1017 aaPredicted RBP6.08□□□□□ -1.44
VCAM1-202ENST00000347652 GTF2IP78347 998 aa6.08□□□□□ -1.44
VCAM1-202ENST00000347652 GRIK5Q16478 980 aa6.08□□□□□ -1.44
VCAM1-202ENST00000347652 C21orf62-AS1Q17RA5 79 aa6.08□□□□□ -1.44
VCAM1-202ENST00000347652 PUS10Q3MIT2 529 aaKnown RBP6.08□□□□□ -1.44
VCAM1-202ENST00000347652 PI16Q6UXB8 463 aa6.08□□□□□ -1.44
VCAM1-202ENST00000347652 CERS5Q8N5B7 392 aa6.08□□□□□ -1.44
VCAM1-202ENST00000347652 EDC3Q96F86 508 aaKnown RBP6.08□□□□□ -1.44
VCAM1-202ENST00000347652 PAG1Q9NWQ8 432 aa6.08□□□□□ -1.44
VCAM1-202ENST00000347652 GPRC5DQ9NZD1 345 aa6.08□□□□□ -1.44
VCAM1-202ENST00000347652 CNTN3Q9P232 1028 aa6.08□□□□□ -1.44
VCAM1-202ENST00000347652 PCDHAC2Q9Y5I4 1007 aa6.08□□□□□ -1.44
VCAM1-202ENST00000347652 FAM205AQ6ZU69 1335 aa6.08□□□□□ -1.44
VCAM1-202ENST00000347652 GOLIM4O00461 696 aa6.08□□□□□ -1.44
VCAM1-202ENST00000347652 ATF4P18848 351 aaPredicted RBP6.08□□□□□ -1.44
VCAM1-202ENST00000347652 EPHX2P34913 555 aa6.08□□□□□ -1.44
VCAM1-202ENST00000347652 TRAPPC10P48553 1259 aa6.08□□□□□ -1.44
VCAM1-202ENST00000347652 MASP1P48740 699 aa6.08□□□□□ -1.44
VCAM1-202ENST00000347652 HTRA3P83110 453 aa6.08□□□□□ -1.44
VCAM1-202ENST00000347652 SLC4A8Q2Y0W8 1093 aa6.08□□□□□ -1.44
VCAM1-202ENST00000347652 DACT2Q5SW24 774 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms