RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 ZBTB43O43298 467 aa10.76□□□□□ -0.69
ATG4A-202ENST00000345734 PRDM1O75626 825 aa10.76□□□□□ -0.69
ATG4A-202ENST00000345734 APLP1P51693 650 aa10.76□□□□□ -0.69
ATG4A-202ENST00000345734 UBE2HP62256 183 aa10.76□□□□□ -0.69
ATG4A-202ENST00000345734 GIMAP6Q6P9H5 292 aa10.76□□□□□ -0.69
ATG4A-202ENST00000345734 CAMKK2Q96RR4 588 aa10.76□□□□□ -0.69
ATG4A-202ENST00000345734 TRAIPQ9BWF2 469 aa10.76□□□□□ -0.69
ATG4A-202ENST00000345734 PPP1R12CQ9BZL4 782 aa10.76□□□□□ -0.69
ATG4A-202ENST00000345734 GRPEL1Q9HAV7 217 aa10.76□□□□□ -0.69
ATG4A-202ENST00000345734 GJB4Q9NTQ9 266 aa10.76□□□□□ -0.69
ATG4A-202ENST00000345734 KIF3AQ9Y496 699 aa10.76□□□□□ -0.69
ATG4A-202ENST00000345734 SYCE3A1L190 88 aa10.75□□□□□ -0.69
ATG4A-202ENST00000345734 CCDC69A6NI79 296 aa10.75□□□□□ -0.69
ATG4A-202ENST00000345734 PDE6BP35913 854 aa10.75□□□□□ -0.69
ATG4A-202ENST00000345734 WTAPQ15007 396 aa10.75□□□□□ -0.69
ATG4A-202ENST00000345734 SLC4A8Q2Y0W8 1093 aa10.75□□□□□ -0.69
ATG4A-202ENST00000345734 TMC4Q7Z404 712 aa10.75□□□□□ -0.69
ATG4A-202ENST00000345734 SH3RF3Q8TEJ3 882 aaPredicted RBP10.75□□□□□ -0.69
ATG4A-202ENST00000345734 PANK2Q9BZ23 570 aa10.75□□□□□ -0.69
ATG4A-202ENST00000345734 SLC12A7Q9Y666 1083 aa10.75□□□□□ -0.69
ATG4A-202ENST00000345734 PALM3A6NDB9 673 aaPredicted RBP10.75□□□□□ -0.69
ATG4A-202ENST00000345734 GOLGA8AA7E2F4 631 aa10.75□□□□□ -0.69
ATG4A-202ENST00000345734 MRE11P49959 708 aa10.75□□□□□ -0.69
ATG4A-202ENST00000345734 SLC15A2Q16348 729 aa10.75□□□□□ -0.69
ATG4A-202ENST00000345734 ESR2Q92731 530 aa10.75□□□□□ -0.69
ATG4A-202ENST00000345734 PHKBQ93100 1093 aa10.75□□□□□ -0.69
ATG4A-202ENST00000345734 ZNF622Q969S3 477 aaKnown RBP eCLIP10.75□□□□□ -0.69
ATG4A-202ENST00000345734 ZSCAN16Q9H4T2 348 aaPredicted RBP10.75□□□□□ -0.69
ATG4A-202ENST00000345734 ALG2Q9H553 416 aa10.75□□□□□ -0.69
ATG4A-202ENST00000345734 ATP8A2Q9NTI2 1148 aa10.75□□□□□ -0.69
ATG4A-202ENST00000345734 RANBP6O60518 1105 aaKnown RBP10.74□□□□□ -0.69
ATG4A-202ENST00000345734 FGRP09769 529 aa10.74□□□□□ -0.69
ATG4A-202ENST00000345734 LMOD1P29536 600 aaPredicted RBP10.74□□□□□ -0.69
ATG4A-202ENST00000345734 GSTO1P78417 241 aa10.74□□□□□ -0.69
ATG4A-202ENST00000345734 SART3Q15020 963 aaKnown RBP10.74□□□□□ -0.69
ATG4A-202ENST00000345734 NTRK3Q16288 839 aa10.74□□□□□ -0.69
ATG4A-202ENST00000345734 TMED8Q6PL24 325 aaPredicted RBP10.74□□□□□ -0.69
ATG4A-202ENST00000345734 LEO1Q8WVC0 666 aaPredicted RBP10.74□□□□□ -0.69
ATG4A-202ENST00000345734 MASTLQ96GX5 879 aa10.74□□□□□ -0.69
ATG4A-202ENST00000345734 C8orf76Q96K31 380 aa10.74□□□□□ -0.69
ATG4A-202ENST00000345734 AIFM3Q96NN9 605 aa10.74□□□□□ -0.69
ATG4A-202ENST00000345734 MAP10Q9P2G4 905 aa10.74□□□□□ -0.69
ATG4A-202ENST00000345734 ISY1Q9ULR0 285 aaKnown RBP10.74□□□□□ -0.69
ATG4A-202ENST00000345734 NAV1Q8NEY1 1877 aa10.73□□□□□ -0.69
ATG4A-202ENST00000345734 UBE2Q2LH0YL09 131 aa10.73□□□□□ -0.69
ATG4A-202ENST00000345734 ALDH1B1P30837 517 aa10.73□□□□□ -0.69
ATG4A-202ENST00000345734 SEC23AQ15436 765 aa10.73□□□□□ -0.69
ATG4A-202ENST00000345734 MFSD14BQ5SR56 506 aa10.73□□□□□ -0.69
ATG4A-202ENST00000345734 C2CD5Q86YS7 1000 aa10.73□□□□□ -0.69
ATG4A-202ENST00000345734 MPNDQ8N594 471 aa10.73□□□□□ -0.69
ATG4A-202ENST00000345734 KCTD17Q8N5Z5 321 aa10.73□□□□□ -0.69
ATG4A-202ENST00000345734 PBXIP1Q96AQ6 731 aa10.73□□□□□ -0.69
ATG4A-202ENST00000345734 SPATA32Q96LK8 384 aa10.73□□□□□ -0.69
ATG4A-202ENST00000345734 UBAC1Q9BSL1 405 aa10.73□□□□□ -0.69
ATG4A-202ENST00000345734 RTFDC1Q9BY42 306 aaPredicted RBP10.73□□□□□ -0.69
ATG4A-202ENST00000345734 FTOQ9C0B1 505 aaKnown RBP eCLIP10.73□□□□□ -0.69
ATG4A-202ENST00000345734 MCM9Q9NXL9 1143 aa10.73□□□□□ -0.69
ATG4A-202ENST00000345734 MKRN1Q9UHC7 482 aaKnown RBP10.73□□□□□ -0.69
ATG4A-202ENST00000345734 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.73□□□□□ -0.69
ATG4A-202ENST00000345734 MROH7-TTC4A0A0A0MT08 1334 aa10.73□□□□□ -0.69
ATG4A-202ENST00000345734 TNKSO95271 1327 aa10.73□□□□□ -0.69
ATG4A-202ENST00000345734 DLEC1Q9Y238 1755 aa10.73□□□□□ -0.69
ATG4A-202ENST00000345734 SLX4Q8IY92 1834 aa10.73□□□□□ -0.69
ATG4A-202ENST00000345734 ERICH2A1L162 156 aa10.73□□□□□ -0.69
ATG4A-202ENST00000345734 USP5P45974 858 aa10.73□□□□□ -0.69
ATG4A-202ENST00000345734 PPP4CP60510 307 aa10.73□□□□□ -0.69
ATG4A-202ENST00000345734 GTF2IP78347 998 aa10.73□□□□□ -0.69
ATG4A-202ENST00000345734 CEBPZQ03701 1054 aaKnown RBP10.73□□□□□ -0.69
ATG4A-202ENST00000345734 ENAHQ8N8S7 591 aaPredicted RBP10.73□□□□□ -0.69
ATG4A-202ENST00000345734 FBXO18Q8NFZ0 1043 aa10.73□□□□□ -0.69
ATG4A-202ENST00000345734 TGFBRAP1Q8WUH2 860 aa10.73□□□□□ -0.69
ATG4A-202ENST00000345734 PDGFDQ9GZP0 370 aaPredicted RBP10.73□□□□□ -0.69
ATG4A-202ENST00000345734 SCAND2PQ9GZW5 306 aaPredicted RBP10.73□□□□□ -0.69
ATG4A-202ENST00000345734 STK32BQ9NY57 414 aa10.73□□□□□ -0.69
ATG4A-202ENST00000345734 ELP1O95163 1332 aa10.73□□□□□ -0.69
ATG4A-202ENST00000345734 MYH6P13533 1939 aa10.73□□□□□ -0.69
ATG4A-202ENST00000345734 BTDP43251 543 aa10.72□□□□□ -0.69
ATG4A-202ENST00000345734 SBK1Q52WX2 424 aa10.72□□□□□ -0.69
ATG4A-202ENST00000345734 FAM47AQ5JRC9 791 aa10.72□□□□□ -0.69
ATG4A-202ENST00000345734 LRSAM1Q6UWE0 723 aa10.72□□□□□ -0.69
ATG4A-202ENST00000345734 DPP8Q6V1X1 898 aaPredicted RBP10.72□□□□□ -0.69
ATG4A-202ENST00000345734 SYNE3Q6ZMZ3 975 aa10.72□□□□□ -0.69
ATG4A-202ENST00000345734 ZNF654Q8IZM8 581 aa10.72□□□□□ -0.69
ATG4A-202ENST00000345734 ZSCAN10Q96SZ4 725 aaPredicted RBP10.72□□□□□ -0.69
ATG4A-202ENST00000345734 MTA3Q9BTC8 594 aa10.72□□□□□ -0.69
ATG4A-202ENST00000345734 ARPP21Q9UBL0 812 aaPredicted RBP10.72□□□□□ -0.69
ATG4A-202ENST00000345734 GOLGA8CPA6NN73 597 aa10.72□□□□□ -0.69
ATG4A-202ENST00000345734 TK2O00142 265 aa10.72□□□□□ -0.69
ATG4A-202ENST00000345734 ORC4O43929 436 aa10.72□□□□□ -0.69
ATG4A-202ENST00000345734 NMT2O60551 498 aa10.72□□□□□ -0.69
ATG4A-202ENST00000345734 CDKL5O76039 1030 aa10.72□□□□□ -0.69
ATG4A-202ENST00000345734 BAG3O95817 575 aa10.72□□□□□ -0.69
ATG4A-202ENST00000345734 LDHCP07864 332 aa10.72□□□□□ -0.69
ATG4A-202ENST00000345734 CHRNA5P30532 468 aa10.72□□□□□ -0.69
ATG4A-202ENST00000345734 RTN1Q16799 776 aa10.72□□□□□ -0.69
ATG4A-202ENST00000345734 CPLX2Q6PUV4 134 aaKnown RBP10.72□□□□□ -0.69
ATG4A-202ENST00000345734 CMTR1Q8N1G2 835 aaKnown RBP10.72□□□□□ -0.69
ATG4A-202ENST00000345734 NUP133Q8WUM0 1156 aa10.72□□□□□ -0.69
ATG4A-202ENST00000345734 SYAP1Q96A49 352 aaPredicted RBP10.72□□□□□ -0.69
ATG4A-202ENST00000345734 PGBD1Q96JS3 809 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms