RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 XBP1P17861 261 aa25.51■■□□□ 1.67
CACNB1-201ENST00000344140 GJB4Q9NTQ9 266 aa25.51■■□□□ 1.67
CACNB1-201ENST00000344140 MAD2L2Q9UI95 211 aa25.51■■□□□ 1.67
CACNB1-201ENST00000344140 V9GY48 417 aaPredicted RBP25.51■■□□□ 1.67
CACNB1-201ENST00000344140 FAM196BA6NMK8 535 aa25.5■■□□□ 1.67
CACNB1-201ENST00000344140 MBD3O95983 291 aa25.5■■□□□ 1.67
CACNB1-201ENST00000344140 TNFAIP1Q13829 316 aa25.5■■□□□ 1.67
CACNB1-201ENST00000344140 ZNF396Q96N95 335 aaPredicted RBP25.5■■□□□ 1.67
CACNB1-201ENST00000344140 TCHHQ07283 1943 aa25.5■■□□□ 1.67
CACNB1-201ENST00000344140 PALM3A6NDB9 673 aaPredicted RBP25.49■■□□□ 1.67
CACNB1-201ENST00000344140 UBE2Q2LH0YL09 131 aa25.49■■□□□ 1.67
CACNB1-201ENST00000344140 KIF23Q02241 960 aaPredicted RBP25.49■■□□□ 1.67
CACNB1-201ENST00000344140 TMEM179Q6ZVK1 233 aa25.49■■□□□ 1.67
CACNB1-201ENST00000344140 KANSL2Q9H9L4 492 aa25.49■■□□□ 1.67
CACNB1-201ENST00000344140 GREB1LQ9C091 1923 aaPredicted RBP25.49■■□□□ 1.67
CACNB1-201ENST00000344140 PARP1P09874 1014 aaKnown RBP25.49■■□□□ 1.67
CACNB1-201ENST00000344140 SAFBQ15424 915 aaKnown RBP eCLIP25.49■■□□□ 1.67
CACNB1-201ENST00000344140 PKN1Q16512 942 aa25.49■■□□□ 1.67
CACNB1-201ENST00000344140 GPC2Q8N158 579 aa25.49■■□□□ 1.67
CACNB1-201ENST00000344140 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.49■■□□□ 1.67
CACNB1-201ENST00000344140 CLIP2Q9UDT6 1046 aa25.49■■□□□ 1.67
CACNB1-201ENST00000344140 ELP1O95163 1332 aa25.48■■□□□ 1.67
CACNB1-201ENST00000344140 H7C1D1 291 aa25.48■■□□□ 1.67
CACNB1-201ENST00000344140 SLURP2P0DP57 97 aa25.48■■□□□ 1.67
CACNB1-201ENST00000344140 RBM26Q5T8P6 1007 aaKnown RBP25.48■■□□□ 1.67
CACNB1-201ENST00000344140 TBC1D12O60347 775 aa25.47■■□□□ 1.67
CACNB1-201ENST00000344140 ABCB5Q2M3G0 1257 aa25.47■■□□□ 1.67
CACNB1-201ENST00000344140 STAG2Q8N3U4 1231 aa25.47■■□□□ 1.67
CACNB1-201ENST00000344140 MMP1P03956 469 aa25.47■■□□□ 1.67
CACNB1-201ENST00000344140 SMARCA1P28370 1054 aa25.47■■□□□ 1.67
CACNB1-201ENST00000344140 TMEM39BQ9GZU3 492 aa25.47■■□□□ 1.67
CACNB1-201ENST00000344140 NYAP2Q9P242 653 aa25.47■■□□□ 1.67
CACNB1-201ENST00000344140 UBE2HP62256 183 aa25.46■■□□□ 1.67
CACNB1-201ENST00000344140 GNL2Q13823 731 aaKnown RBP25.46■■□□□ 1.67
CACNB1-201ENST00000344140 KIF4BQ2VIQ3 1234 aa25.46■■□□□ 1.67
CACNB1-201ENST00000344140 SAMD7Q7Z3H4 446 aa25.46■■□□□ 1.67
CACNB1-201ENST00000344140 SPATA32Q96LK8 384 aa25.46■■□□□ 1.67
CACNB1-201ENST00000344140 CABP5Q9NP86 173 aa25.46■■□□□ 1.67
CACNB1-201ENST00000344140 TFIP11Q9UBB9 837 aaKnown RBP25.46■■□□□ 1.67
CACNB1-201ENST00000344140 MTMR7Q9Y216 660 aa25.46■■□□□ 1.67
CACNB1-201ENST00000344140 KLRF2D3W0D1 207 aa25.45■■□□□ 1.67
CACNB1-201ENST00000344140 EGFRP00533 1210 aa25.45■■□□□ 1.67
CACNB1-201ENST00000344140 U2AF2P26368 475 aaKnown RBP eCLIP25.45■■□□□ 1.67
CACNB1-201ENST00000344140 LRRC47Q8N1G4 583 aaKnown RBP25.45■■□□□ 1.67
CACNB1-201ENST00000344140 MKL1Q969V6 931 aa25.45■■□□□ 1.67
CACNB1-201ENST00000344140 SPZ1Q9BXG8 430 aa25.45■■□□□ 1.67
CACNB1-201ENST00000344140 SNHG28P0DPA3 235 aa25.45■■□□□ 1.66
CACNB1-201ENST00000344140 PDHBP11177 359 aa25.45■■□□□ 1.66
CACNB1-201ENST00000344140 SCG2P13521 617 aa25.45■■□□□ 1.66
CACNB1-201ENST00000344140 PFKFB3Q16875 520 aaPredicted RBP25.45■■□□□ 1.66
CACNB1-201ENST00000344140 TBC1D10BQ4KMP7 808 aaPredicted RBP25.45■■□□□ 1.66
CACNB1-201ENST00000344140 ASPRV1Q53RT3 343 aa25.45■■□□□ 1.66
CACNB1-201ENST00000344140 CLEC10AQ8IUN9 316 aa25.45■■□□□ 1.66
CACNB1-201ENST00000344140 ZC3H4Q9UPT8 1303 aaKnown RBP25.44■■□□□ 1.66
CACNB1-201ENST00000344140 KIF28PB7ZC32 967 aa25.44■■□□□ 1.66
CACNB1-201ENST00000344140 USP17L2Q6R6M4 530 aa25.44■■□□□ 1.66
CACNB1-201ENST00000344140 GPT2Q8TD30 523 aa25.44■■□□□ 1.66
CACNB1-201ENST00000344140 LEO1Q8WVC0 666 aaPredicted RBP25.44■■□□□ 1.66
CACNB1-201ENST00000344140 GPRC5DQ9NZD1 345 aa25.44■■□□□ 1.66
CACNB1-201ENST00000344140 PGAP2Q9UHJ9 254 aa25.44■■□□□ 1.66
CACNB1-201ENST00000344140 MYH6P13533 1939 aa25.44■■□□□ 1.66
CACNB1-201ENST00000344140 ATP2B2Q01814 1243 aa25.43■■□□□ 1.66
CACNB1-201ENST00000344140 RASA3Q14644 834 aa25.43■■□□□ 1.66
CACNB1-201ENST00000344140 MYSM1Q5VVJ2 828 aa25.43■■□□□ 1.66
CACNB1-201ENST00000344140 FOXP1Q9H334 677 aaPredicted RBP25.43■■□□□ 1.66
CACNB1-201ENST00000344140 hCG_1642624A0A1W2PR95 340 aa25.43■■□□□ 1.66
CACNB1-201ENST00000344140 USP17L5A8MUK1 530 aa25.43■■□□□ 1.66
CACNB1-201ENST00000344140 GADD45BO75293 160 aaPredicted RBP25.43■■□□□ 1.66
CACNB1-201ENST00000344140 GDF11O95390 407 aa25.43■■□□□ 1.66
CACNB1-201ENST00000344140 MAP3K10Q02779 954 aa25.43■■□□□ 1.66
CACNB1-201ENST00000344140 ICA1Q05084 483 aa25.43■■□□□ 1.66
CACNB1-201ENST00000344140 SEPT2Q15019 361 aa25.43■■□□□ 1.66
CACNB1-201ENST00000344140 KCNJ14Q9UNX9 436 aa25.43■■□□□ 1.66
CACNB1-201ENST00000344140 GOLGA8HP0CJ92 632 aa25.42■■□□□ 1.66
CACNB1-201ENST00000344140 EEF2P13639 858 aaKnown RBP25.42■■□□□ 1.66
CACNB1-201ENST00000344140 DIS3L2Q8IYB7 885 aaKnown RBP25.42■■□□□ 1.66
CACNB1-201ENST00000344140 VPS54Q9P1Q0 977 aa25.42■■□□□ 1.66
CACNB1-201ENST00000344140 GH2P01242 217 aa25.41■■□□□ 1.66
CACNB1-201ENST00000344140 DPY19L2Q6NUT2 758 aa25.41■■□□□ 1.66
CACNB1-201ENST00000344140 FAM177A1Q8N128 213 aaPredicted RBP25.41■■□□□ 1.66
CACNB1-201ENST00000344140 USP28Q96RU2 1077 aa25.41■■□□□ 1.66
CACNB1-201ENST00000344140 PHF20Q9BVI0 1012 aa25.41■■□□□ 1.66
CACNB1-201ENST00000344140 SH3GLB2Q9NR46 395 aa25.41■■□□□ 1.66
CACNB1-201ENST00000344140 SYNPO2Q9UMS6 1093 aa25.41■■□□□ 1.66
CACNB1-201ENST00000344140 GPATCH4Q5T3I0 446 aaKnown RBP25.4■■□□□ 1.66
CACNB1-201ENST00000344140 NOSTRINQ8IVI9 506 aa25.4■■□□□ 1.66
CACNB1-201ENST00000344140 BRMS1Q9HCU9 246 aa25.4■■□□□ 1.66
CACNB1-201ENST00000344140 RTEL1Q9NZ71 1219 aa25.4■■□□□ 1.66
CACNB1-201ENST00000344140 HACL1Q9UJ83 578 aa25.4■■□□□ 1.66
CACNB1-201ENST00000344140 RCOR1Q9UKL0 485 aa25.4■■□□□ 1.66
CACNB1-201ENST00000344140 MYH15Q9Y2K3 1946 aa25.4■■□□□ 1.66
CACNB1-201ENST00000344140 CYTH3O43739 400 aa25.4■■□□□ 1.66
CACNB1-201ENST00000344140 GZF1Q9H116 711 aaPredicted RBP25.4■■□□□ 1.66
CACNB1-201ENST00000344140 BTBD18B2RXH4 712 aa25.39■■□□□ 1.66
CACNB1-201ENST00000344140 ZNF543Q08ER8 600 aa25.39■■□□□ 1.66
CACNB1-201ENST00000344140 RRP1BQ14684 758 aaKnown RBP25.39■■□□□ 1.66
CACNB1-201ENST00000344140 SHROOM1Q2M3G4 852 aaPredicted RBP25.39■■□□□ 1.66
CACNB1-201ENST00000344140 SLC35G1Q2M3R5 365 aa25.39■■□□□ 1.66
CACNB1-201ENST00000344140 POLR3EQ9NVU0 708 aa25.39■■□□□ 1.66
CACNB1-201ENST00000344140 GSE1Q14687 1217 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms