RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 UIMC1Q96RL1 719 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 ATP8A2Q9NTI2 1148 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 ADGRL3Q9HAR2 1447 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 IBSPP21815 317 aaPredicted RBP8.03□□□□□ -1.12
VCAN-202ENST00000342785 DYNLL1P63167 89 aaKnown RBP8.03□□□□□ -1.12
VCAN-202ENST00000342785 TNNC1P63316 161 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 MORC3Q14149 939 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 MFSD14BQ5SR56 506 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 ENOX1Q8TC92 643 aaKnown RBP8.03□□□□□ -1.12
VCAN-202ENST00000342785 NAP1L4Q99733 375 aaKnown RBP8.03□□□□□ -1.12
VCAN-202ENST00000342785 NLRC4Q9NPP4 1024 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 TAF6LQ9Y6J9 622 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 NRXN1Q9ULB1 1477 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 OVOS2A0A0J9YW53 1432 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 OVOS2Q6IE36 1432 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 ZEB2O60315 1214 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 DDAH1O94760 285 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 CASP14P31944 242 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 RAD51AP2Q09MP3 1159 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 ALDH8A1Q9H2A2 487 aaPredicted RBP8.03□□□□□ -1.12
VCAN-202ENST00000342785 HAUS4Q9H6D7 363 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 PCDHB6Q9Y5E3 794 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.03□□□□□ -1.12
VCAN-202ENST00000342785 CPS1P31327 1500 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 GCOM1H8Y6P7 765 aaPredicted RBP8.03□□□□□ -1.12
VCAN-202ENST00000342785 MYZAPP0CAP1 466 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 CDC25AP30304 524 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 NELFCDQ8IXH7 590 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 SMYD4Q8IYR2 804 aaPredicted RBP8.03□□□□□ -1.12
VCAN-202ENST00000342785 FMR1NBQ8N0W7 255 aaPredicted RBP8.03□□□□□ -1.12
VCAN-202ENST00000342785 ARFGAP2Q8N6H7 521 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 SAMSN1Q9NSI8 373 aaKnown RBP8.03□□□□□ -1.12
VCAN-202ENST00000342785 ADGRB1O14514 1584 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 ERVV-1B6SEH8 477 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 DNM2P50570 870 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 RNASE9P60153 205 aaKnown RBP8.03□□□□□ -1.12
VCAN-202ENST00000342785 SMC1AQ14683 1233 aaKnown RBP8.03□□□□□ -1.12
VCAN-202ENST00000342785 SLC9C1Q4G0N8 1177 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 MB21D2Q8IYB1 491 aaPredicted RBP8.03□□□□□ -1.12
VCAN-202ENST00000342785 GDAP1L1Q96MZ0 367 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 PLVAPQ9BX97 442 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 PCP11498 1178 aaKnown RBP8.03□□□□□ -1.12
VCAN-202ENST00000342785 OAS2P29728 719 aaKnown RBP8.03□□□□□ -1.12
VCAN-202ENST00000342785 CALCRLQ16602 461 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 CCDC144BQ3MJ40 725 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 PPP4R3AQ6IN85 833 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 C8orf74Q6P047 294 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 TBC1D10CQ8IV04 446 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 TSGA10Q9BZW7 698 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 BIN2Q9UBW5 565 aaPredicted RBP8.03□□□□□ -1.12
VCAN-202ENST00000342785 SAR1BQ9Y6B6 198 aa8.03□□□□□ -1.12
VCAN-202ENST00000342785 CYP2D7A0A087X1C5 515 aa8.02□□□□□ -1.12
VCAN-202ENST00000342785 FAM76AQ8TAV0 307 aa8.02□□□□□ -1.12
VCAN-202ENST00000342785 RBM17Q96I25 401 aaKnown RBP8.02□□□□□ -1.12
VCAN-202ENST00000342785 EPN1Q9Y6I3 576 aaPredicted RBP8.02□□□□□ -1.12
VCAN-202ENST00000342785 TRAPPC10P48553 1259 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 BRD3Q15059 726 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 USPL1Q5W0Q7 1092 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 HAUS3Q68CZ6 603 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 C2CD5Q86YS7 1000 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 TBC1D22AQ8WUA7 517 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 GOLPH3LQ9H4A5 285 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 SPATA31A3Q5VYP0 1347 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 PTPRUQ92729 1446 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 COBLO75128 1261 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 SCARF1Q14162 830 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 PLS1Q14651 629 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 RRAGAQ7L523 313 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 VSTM4Q8IW00 320 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 RASGRP4Q8TDF6 673 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 IFIH1Q9BYX4 1025 aaKnown RBP8.02□□□□□ -1.13
VCAN-202ENST00000342785 GLT8D2Q9H1C3 349 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 TBC1D7Q9P0N9 293 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 NCOA3Q9Y6Q9 1424 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 TLDC2A0PJX2 215 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 ATG9AQ7Z3C6 839 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 USP37Q86T82 979 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 NOX5Q96PH1 765 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 SOS2Q07890 1332 aaPredicted RBP8.02□□□□□ -1.13
VCAN-202ENST00000342785 OR52Z1P0C646 297 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 PTPREP23469 700 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 PRPHP41219 470 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 COPB1P53618 953 aaKnown RBP8.02□□□□□ -1.13
VCAN-202ENST00000342785 TRIM28Q13263 835 aaKnown RBP8.02□□□□□ -1.13
VCAN-202ENST00000342785 TYW1BQ6NUM6 668 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 EPSTI1Q96J88 318 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 ISCA1Q9BUE6 129 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 VEZTQ9HBM0 779 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 INCENPQ9NQS7 918 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 RPN1P04843 607 aaKnown RBP8.02□□□□□ -1.13
VCAN-202ENST00000342785 LONP1P36776 959 aaKnown RBP8.02□□□□□ -1.13
VCAN-202ENST00000342785 UTP14CQ5TAP6 766 aaKnown RBP8.02□□□□□ -1.13
VCAN-202ENST00000342785 WDR78Q5VTH9 848 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 SUSD4Q5VX71 490 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 NEK8Q86SG6 692 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 MAN1B1Q9UKM7 699 aa8.02□□□□□ -1.13
VCAN-202ENST00000342785 ATP2C2O75185 946 aa8.01□□□□□ -1.13
VCAN-202ENST00000342785 TECP42680 631 aa8.01□□□□□ -1.13
VCAN-202ENST00000342785 GTF2IP78347 998 aa8.01□□□□□ -1.13
VCAN-202ENST00000342785 WHAMMP3Q1A5X7 153 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms