RNA–Protein interactions for RNA: ENST00000341846.9

TRIM29-201, Transcript of tripartite motif containing 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM29, Length 3,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-201ENST00000341846 TMX4Q9H1E5 349 aaPredicted RBP12.7□□□□□ -0.38
TRIM29-201ENST00000341846 KCNF1Q9H3M0 494 aa12.7□□□□□ -0.38
TRIM29-201ENST00000341846 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.7□□□□□ -0.38
TRIM29-201ENST00000341846 V9GYY5 206 aaPredicted RBP12.7□□□□□ -0.38
TRIM29-201ENST00000341846 XBP1P17861 261 aa12.7□□□□□ -0.38
TRIM29-201ENST00000341846 JMYQ8N9B5 988 aa12.7□□□□□ -0.38
TRIM29-201ENST00000341846 STAMQ92783 540 aa12.7□□□□□ -0.38
TRIM29-201ENST00000341846 ST7Q9NRC1 585 aa12.7□□□□□ -0.38
TRIM29-201ENST00000341846 KCNH3Q9ULD8 1083 aa12.7□□□□□ -0.38
TRIM29-201ENST00000341846 STK36Q9NRP7 1315 aa12.69□□□□□ -0.38
TRIM29-201ENST00000341846 POLR2DO15514 142 aaKnown RBP12.69□□□□□ -0.38
TRIM29-201ENST00000341846 CASP1P29466 404 aa12.69□□□□□ -0.38
TRIM29-201ENST00000341846 HOXA10P31260 410 aaPredicted RBP12.69□□□□□ -0.38
TRIM29-201ENST00000341846 LRMPQ12912 555 aa12.69□□□□□ -0.38
TRIM29-201ENST00000341846 USP17L2Q6R6M4 530 aa12.69□□□□□ -0.38
TRIM29-201ENST00000341846 CNNM3Q8NE01 707 aa12.69□□□□□ -0.38
TRIM29-201ENST00000341846 KIAA1524Q8TCG1 905 aa12.69□□□□□ -0.38
TRIM29-201ENST00000341846 EYA3Q99504 573 aa12.69□□□□□ -0.38
TRIM29-201ENST00000341846 ATP6V0A2Q9Y487 856 aa12.69□□□□□ -0.38
TRIM29-201ENST00000341846 DAGLAQ9Y4D2 1042 aa12.69□□□□□ -0.38
TRIM29-201ENST00000341846 CASZ1Q86V15 1759 aa12.69□□□□□ -0.38
TRIM29-201ENST00000341846 FLT1P17948 1338 aa12.69□□□□□ -0.38
TRIM29-201ENST00000341846 CTAGE5O15320 804 aa12.69□□□□□ -0.38
TRIM29-201ENST00000341846 IL1R1P14778 569 aa12.69□□□□□ -0.38
TRIM29-201ENST00000341846 CDC25AP30304 524 aa12.69□□□□□ -0.38
TRIM29-201ENST00000341846 CDK8P49336 464 aa12.69□□□□□ -0.38
TRIM29-201ENST00000341846 EZH2Q15910 746 aaKnown RBP12.69□□□□□ -0.38
TRIM29-201ENST00000341846 CCDC186Q7Z3E2 898 aa12.69□□□□□ -0.38
TRIM29-201ENST00000341846 FILIP1Q7Z7B0 1213 aa12.69□□□□□ -0.38
TRIM29-201ENST00000341846 KRI1Q8N9T8 703 aaKnown RBP12.69□□□□□ -0.38
TRIM29-201ENST00000341846 TIGD1Q96MW7 591 aa12.69□□□□□ -0.38
TRIM29-201ENST00000341846 CRAMP1Q96RY5 1269 aa12.69□□□□□ -0.38
TRIM29-201ENST00000341846 CHD4Q14839 1912 aa12.69□□□□□ -0.38
TRIM29-201ENST00000341846 FGRP09769 529 aa12.68□□□□□ -0.38
TRIM29-201ENST00000341846 RASA1P20936 1047 aa12.68□□□□□ -0.38
TRIM29-201ENST00000341846 KRT2P35908 639 aa12.68□□□□□ -0.38
TRIM29-201ENST00000341846 SBK1Q52WX2 424 aa12.68□□□□□ -0.38
TRIM29-201ENST00000341846 HEATR3Q7Z4Q2 680 aa12.68□□□□□ -0.38
TRIM29-201ENST00000341846 C2CD5Q86YS7 1000 aa12.68□□□□□ -0.38
TRIM29-201ENST00000341846 AKT1S1Q96B36 256 aa12.68□□□□□ -0.38
TRIM29-201ENST00000341846 UBA5Q9GZZ9 404 aa12.68□□□□□ -0.38
TRIM29-201ENST00000341846 ANO10Q9NW15 660 aa12.68□□□□□ -0.38
TRIM29-201ENST00000341846 LY75O60449 1722 aa12.68□□□□□ -0.38
TRIM29-201ENST00000341846 MCM7P33993 719 aa12.68□□□□□ -0.38
TRIM29-201ENST00000341846 RHBDL3P58872 404 aa12.68□□□□□ -0.38
TRIM29-201ENST00000341846 ARID5BQ14865 1188 aa12.68□□□□□ -0.38
TRIM29-201ENST00000341846 IQCB1Q15051 598 aa12.68□□□□□ -0.38
TRIM29-201ENST00000341846 ZNF772Q68DY9 489 aaPredicted RBP12.68□□□□□ -0.38
TRIM29-201ENST00000341846 SP8Q8IXZ3 490 aa12.68□□□□□ -0.38
TRIM29-201ENST00000341846 CEP57L1Q8IYX8 460 aa12.68□□□□□ -0.38
TRIM29-201ENST00000341846 ZNF592Q92610 1267 aa12.68□□□□□ -0.38
TRIM29-201ENST00000341846 EPSTI1Q96J88 318 aa12.68□□□□□ -0.38
TRIM29-201ENST00000341846 TMEM47Q9BQJ4 181 aa12.68□□□□□ -0.38
TRIM29-201ENST00000341846 CSRNP2Q9H175 543 aa12.68□□□□□ -0.38
TRIM29-201ENST00000341846 PDS5AQ29RF7 1337 aaKnown RBP12.68□□□□□ -0.38
TRIM29-201ENST00000341846 CNTNAP5Q8WYK1 1306 aa12.68□□□□□ -0.38
TRIM29-201ENST00000341846 PRPF3O43395 683 aaKnown RBP12.68□□□□□ -0.38
TRIM29-201ENST00000341846 CAPN2P17655 700 aa12.68□□□□□ -0.38
TRIM29-201ENST00000341846 RILPL1Q5EBL4 403 aa12.68□□□□□ -0.38
TRIM29-201ENST00000341846 FOXP1Q9H334 677 aaPredicted RBP12.68□□□□□ -0.38
TRIM29-201ENST00000341846 GPR75-ASB3A0A0A6YYF3 556 aa12.67□□□□□ -0.38
TRIM29-201ENST00000341846 CCDC66A2RUB6 948 aa12.67□□□□□ -0.38
TRIM29-201ENST00000341846 LMOD1P29536 600 aaPredicted RBP12.67□□□□□ -0.38
TRIM29-201ENST00000341846 TERF2Q15554 542 aa12.67□□□□□ -0.38
TRIM29-201ENST00000341846 LRRC47Q8N1G4 583 aaKnown RBP12.67□□□□□ -0.38
TRIM29-201ENST00000341846 DDX4Q9NQI0 724 aaKnown RBP12.67□□□□□ -0.38
TRIM29-201ENST00000341846 RBM28Q9NW13 759 aaKnown RBP12.67□□□□□ -0.38
TRIM29-201ENST00000341846 BRWD3Q6RI45 1802 aa12.67□□□□□ -0.38
TRIM29-201ENST00000341846 VWA3AA6NCI4 1184 aa12.67□□□□□ -0.38
TRIM29-201ENST00000341846 MPHOSPH10O00566 681 aaKnown RBP12.67□□□□□ -0.38
TRIM29-201ENST00000341846 DDAH1O94760 285 aa12.67□□□□□ -0.38
TRIM29-201ENST00000341846 CALM1P0DP23 149 aa12.67□□□□□ -0.38
TRIM29-201ENST00000341846 CALM2P0DP24 149 aa12.67□□□□□ -0.38
TRIM29-201ENST00000341846 CALM3P0DP25 149 aa12.67□□□□□ -0.38
TRIM29-201ENST00000341846 SCG2P13521 617 aa12.67□□□□□ -0.38
TRIM29-201ENST00000341846 NPR1P16066 1061 aa12.67□□□□□ -0.38
TRIM29-201ENST00000341846 AFMP43652 599 aa12.67□□□□□ -0.38
TRIM29-201ENST00000341846 NFIAQ12857 509 aa12.67□□□□□ -0.38
TRIM29-201ENST00000341846 TYW1BQ6NUM6 668 aa12.67□□□□□ -0.38
TRIM29-201ENST00000341846 DHX40Q8IX18 779 aaKnown RBP12.67□□□□□ -0.38
TRIM29-201ENST00000341846 CEP95Q96GE4 821 aa12.67□□□□□ -0.38
TRIM29-201ENST00000341846 USP40Q9NVE5 1235 aa12.67□□□□□ -0.38
TRIM29-201ENST00000341846 COL24A1Q17RW2 1714 aa12.67□□□□□ -0.38
TRIM29-201ENST00000341846 FRMPD2Q68DX3 1309 aaPredicted RBP12.67□□□□□ -0.38
TRIM29-201ENST00000341846 TRIM75PA6NK02 468 aa12.67□□□□□ -0.38
TRIM29-201ENST00000341846 PPP4CP60510 307 aa12.67□□□□□ -0.38
TRIM29-201ENST00000341846 GABPB1Q06547 395 aaPredicted RBP12.67□□□□□ -0.38
TRIM29-201ENST00000341846 FOXP4Q8IVH2 680 aaPredicted RBP12.67□□□□□ -0.38
TRIM29-201ENST00000341846 DHX58Q96C10 678 aa12.67□□□□□ -0.38
TRIM29-201ENST00000341846 PHF20Q9BVI0 1012 aa12.67□□□□□ -0.38
TRIM29-201ENST00000341846 CLIP2Q9UDT6 1046 aa12.67□□□□□ -0.38
TRIM29-201ENST00000341846 SERTAD1Q9UHV2 236 aa12.67□□□□□ -0.38
TRIM29-201ENST00000341846 ZNF831Q5JPB2 1677 aa12.66□□□□□ -0.38
TRIM29-201ENST00000341846 DUOX1Q9NRD9 1551 aa12.66□□□□□ -0.38
TRIM29-201ENST00000341846 CTIFO43310 598 aaKnown RBP12.66□□□□□ -0.38
TRIM29-201ENST00000341846 PPP6R2O75170 966 aa12.66□□□□□ -0.38
TRIM29-201ENST00000341846 ZNF75DP51815 510 aa12.66□□□□□ -0.38
TRIM29-201ENST00000341846 SLC35G1Q2M3R5 365 aa12.66□□□□□ -0.38
TRIM29-201ENST00000341846 UBR3Q6ZT12 1888 aa12.66□□□□□ -0.38
TRIM29-201ENST00000341846 CYTH3O43739 400 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms