RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 CASQ1P31415 396 aa17.31■□□□□ 0.36
BRAT1-201ENST00000340611 PRMT6Q96LA8 375 aaPredicted RBP17.31■□□□□ 0.36
BRAT1-201ENST00000340611 ARPP21Q9UBL0 812 aaPredicted RBP17.31■□□□□ 0.36
BRAT1-201ENST00000340611 CD2APQ9Y5K6 639 aa17.31■□□□□ 0.36
BRAT1-201ENST00000340611 E2F4Q16254 413 aa17.3■□□□□ 0.36
BRAT1-201ENST00000340611 APOA5Q6Q788 366 aa17.3■□□□□ 0.36
BRAT1-201ENST00000340611 NSUN7Q8NE18 718 aaKnown RBP17.3■□□□□ 0.36
BRAT1-201ENST00000340611 NUP133Q8WUM0 1156 aa17.3■□□□□ 0.36
BRAT1-201ENST00000340611 CNNM2Q9H8M5 875 aa17.3■□□□□ 0.36
BRAT1-201ENST00000340611 SPON1Q9HCB6 807 aa17.3■□□□□ 0.36
BRAT1-201ENST00000340611 CLRN2A0PK11 232 aa17.3■□□□□ 0.36
BRAT1-201ENST00000340611 CXCL9Q07325 125 aa17.3■□□□□ 0.36
BRAT1-201ENST00000340611 SLF2Q8IX21 1173 aa17.3■□□□□ 0.36
BRAT1-201ENST00000340611 NIM1KQ8IY84 436 aa17.3■□□□□ 0.36
BRAT1-201ENST00000340611 ESR2Q92731 530 aa17.3■□□□□ 0.36
BRAT1-201ENST00000340611 NCAPGQ9BPX3 1015 aa17.3■□□□□ 0.36
BRAT1-201ENST00000340611 UBAC1Q9BSL1 405 aa17.3■□□□□ 0.36
BRAT1-201ENST00000340611 RNF41Q9H4P4 317 aaPredicted RBP17.3■□□□□ 0.36
BRAT1-201ENST00000340611 LAMB1P07942 1786 aa17.29■□□□□ 0.36
BRAT1-201ENST00000340611 PTPDC1A2A3K4 754 aa17.29■□□□□ 0.36
BRAT1-201ENST00000340611 CEP135Q66GS9 1140 aa17.29■□□□□ 0.36
BRAT1-201ENST00000340611 OTUD7BQ6GQQ9 843 aa17.29■□□□□ 0.36
BRAT1-201ENST00000340611 ENAHQ8N8S7 591 aaPredicted RBP17.29■□□□□ 0.36
BRAT1-201ENST00000340611 PHKBQ93100 1093 aa17.29■□□□□ 0.36
BRAT1-201ENST00000340611 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.29■□□□□ 0.36
BRAT1-201ENST00000340611 ZNF75DP51815 510 aa17.29■□□□□ 0.36
BRAT1-201ENST00000340611 WTAPQ15007 396 aa17.29■□□□□ 0.36
BRAT1-201ENST00000340611 CFAP100Q494V2 611 aa17.29■□□□□ 0.36
BRAT1-201ENST00000340611 DNAJC25Q9H1X3 360 aa17.29■□□□□ 0.36
BRAT1-201ENST00000340611 MKNK2Q9HBH9 465 aa17.29■□□□□ 0.36
BRAT1-201ENST00000340611 BCCIPQ9P287 314 aaKnown RBP eCLIP17.29■□□□□ 0.36
BRAT1-201ENST00000340611 TSPY2A6NKD2 308 aa17.28■□□□□ 0.36
BRAT1-201ENST00000340611 TFAP4Q01664 338 aa17.28■□□□□ 0.36
BRAT1-201ENST00000340611 RASGRP2Q7LDG7 609 aa17.28■□□□□ 0.36
BRAT1-201ENST00000340611 CLEC10AQ8IUN9 316 aa17.28■□□□□ 0.36
BRAT1-201ENST00000340611 CACTINQ8WUQ7 758 aaKnown RBP17.28■□□□□ 0.36
BRAT1-201ENST00000340611 AIFM3Q96NN9 605 aa17.28■□□□□ 0.36
BRAT1-201ENST00000340611 ZCCHC17Q9NP64 241 aaKnown RBP17.28■□□□□ 0.36
BRAT1-201ENST00000340611 FER1L6Q2WGJ9 1857 aa17.28■□□□□ 0.36
BRAT1-201ENST00000340611 SHROOM1Q2M3G4 852 aaPredicted RBP17.28■□□□□ 0.36
BRAT1-201ENST00000340611 SBK1Q52WX2 424 aa17.28■□□□□ 0.36
BRAT1-201ENST00000340611 ZNF274Q96GC6 653 aaPredicted RBP17.28■□□□□ 0.36
BRAT1-201ENST00000340611 CCDC69A6NI79 296 aa17.27■□□□□ 0.36
BRAT1-201ENST00000340611 CCDC144BQ3MJ40 725 aa17.27■□□□□ 0.36
BRAT1-201ENST00000340611 AXDND1Q5T1B0 1012 aaPredicted RBP17.27■□□□□ 0.36
BRAT1-201ENST00000340611 RBM26Q5T8P6 1007 aaKnown RBP17.27■□□□□ 0.36
BRAT1-201ENST00000340611 SPATA32Q96LK8 384 aa17.27■□□□□ 0.36
BRAT1-201ENST00000340611 ZNRF3Q9ULT6 936 aa17.27■□□□□ 0.36
BRAT1-201ENST00000340611 PAXBP1Q9Y5B6 917 aa17.27■□□□□ 0.36
BRAT1-201ENST00000340611 EGFRP00533 1210 aa17.27■□□□□ 0.36
BRAT1-201ENST00000340611 METAP2P50579 478 aaKnown RBP eCLIP17.27■□□□□ 0.36
BRAT1-201ENST00000340611 ARID5BQ14865 1188 aa17.27■□□□□ 0.36
BRAT1-201ENST00000340611 RSBN1LQ6PCB5 846 aaPredicted RBP17.27■□□□□ 0.36
BRAT1-201ENST00000340611 HHIPL2Q6UWX4 724 aa17.27■□□□□ 0.36
BRAT1-201ENST00000340611 TMEM87BQ96K49 555 aa17.27■□□□□ 0.36
BRAT1-201ENST00000340611 ZSCAN10Q96SZ4 725 aaPredicted RBP17.27■□□□□ 0.36
BRAT1-201ENST00000340611 CLIP2Q9UDT6 1046 aa17.27■□□□□ 0.36
BRAT1-201ENST00000340611 SLC12A7Q9Y666 1083 aa17.27■□□□□ 0.36
BRAT1-201ENST00000340611 hCG_1642624A0A1W2PR95 340 aa17.27■□□□□ 0.35
BRAT1-201ENST00000340611 FDPSP14324 419 aaKnown RBP17.27■□□□□ 0.35
BRAT1-201ENST00000340611 SUGT1Q9Y2Z0 365 aa17.27■□□□□ 0.35
BRAT1-201ENST00000340611 ZBTB43O43298 467 aa17.26■□□□□ 0.35
BRAT1-201ENST00000340611 NR1I2O75469 434 aa17.26■□□□□ 0.35
BRAT1-201ENST00000340611 PLCG2P16885 1265 aa17.26■□□□□ 0.35
BRAT1-201ENST00000340611 ZNF165P49910 485 aa17.26■□□□□ 0.35
BRAT1-201ENST00000340611 PDE4BQ07343 736 aa17.26■□□□□ 0.35
BRAT1-201ENST00000340611 SEC23AQ15436 765 aa17.26■□□□□ 0.35
BRAT1-201ENST00000340611 ZDHHC15Q96MV8 337 aa17.26■□□□□ 0.35
BRAT1-201ENST00000340611 IL17RBQ9NRM6 502 aa17.26■□□□□ 0.35
BRAT1-201ENST00000340611 GJA3Q9Y6H8 435 aa17.26■□□□□ 0.35
BRAT1-201ENST00000340611 ERICH2A1L162 156 aa17.26■□□□□ 0.35
BRAT1-201ENST00000340611 CDK8P49336 464 aa17.26■□□□□ 0.35
BRAT1-201ENST00000340611 BMS1Q14692 1282 aaKnown RBP17.26■□□□□ 0.35
BRAT1-201ENST00000340611 ZSCAN29Q8IWY8 852 aaPredicted RBP17.26■□□□□ 0.35
BRAT1-201ENST00000340611 BICD2Q8TD16 824 aa17.26■□□□□ 0.35
BRAT1-201ENST00000340611 JDP2Q8WYK2 163 aa17.26■□□□□ 0.35
BRAT1-201ENST00000340611 SMARCE1Q969G3 411 aa17.26■□□□□ 0.35
BRAT1-201ENST00000340611 FAM217BQ9NTX9 383 aaPredicted RBP17.26■□□□□ 0.35
BRAT1-201ENST00000340611 TRMT1Q9NXH9 659 aaKnown RBP17.26■□□□□ 0.35
BRAT1-201ENST00000340611 DDX60LQ5H9U9 1706 aaKnown RBP17.25■□□□□ 0.35
BRAT1-201ENST00000340611 DDTLA6NHG4 134 aaPredicted RBP17.25■□□□□ 0.35
BRAT1-201ENST00000340611 GOLGA8AA7E2F4 631 aa17.25■□□□□ 0.35
BRAT1-201ENST00000340611 TCP10L2B9ZVM9 353 aa17.25■□□□□ 0.35
BRAT1-201ENST00000340611 CPLX1O14810 134 aa17.25■□□□□ 0.35
BRAT1-201ENST00000340611 EVCP57679 992 aa17.25■□□□□ 0.35
BRAT1-201ENST00000340611 ZSCAN26Q16670 478 aa17.25■□□□□ 0.35
BRAT1-201ENST00000340611 ARHGAP27Q6ZUM4 889 aa17.25■□□□□ 0.35
BRAT1-201ENST00000340611 PLA2G4DQ86XP0 818 aa17.25■□□□□ 0.35
BRAT1-201ENST00000340611 CDAN1Q8IWY9 1227 aa17.25■□□□□ 0.35
BRAT1-201ENST00000340611 FAM53CQ9NYF3 392 aa17.25■□□□□ 0.35
BRAT1-201ENST00000340611 FAM198AQ9UFP1 575 aa17.25■□□□□ 0.35
BRAT1-201ENST00000340611 JRKLQ9Y4A0 524 aa17.25■□□□□ 0.35
BRAT1-201ENST00000340611 VIL1P09327 827 aaKnown RBP17.25■□□□□ 0.35
BRAT1-201ENST00000340611 RASA1P20936 1047 aa17.25■□□□□ 0.35
BRAT1-201ENST00000340611 EIF6P56537 245 aaKnown RBP17.25■□□□□ 0.35
BRAT1-201ENST00000340611 DNAJC21Q5F1R6 531 aaKnown RBP17.25■□□□□ 0.35
BRAT1-201ENST00000340611 TEX35Q5T0J7 233 aa17.25■□□□□ 0.35
BRAT1-201ENST00000340611 TMED8Q6PL24 325 aaPredicted RBP17.25■□□□□ 0.35
BRAT1-201ENST00000340611 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.25■□□□□ 0.35
BRAT1-201ENST00000340611 USP27XA6NNY8 438 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms