RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 NDUFA8P51970 172 aa25.84■■□□□ 1.73
PDLIM2-203ENST00000339162 USP17L2Q6R6M4 530 aa25.84■■□□□ 1.73
PDLIM2-203ENST00000339162 CYTH3O43739 400 aa25.83■■□□□ 1.73
PDLIM2-203ENST00000339162 KRT2P35908 639 aa25.83■■□□□ 1.73
PDLIM2-203ENST00000339162 PFKFB3Q16875 520 aaPredicted RBP25.83■■□□□ 1.73
PDLIM2-203ENST00000339162 CFAP100Q494V2 611 aa25.83■■□□□ 1.73
PDLIM2-203ENST00000339162 NOM1Q5C9Z4 860 aaKnown RBP25.83■■□□□ 1.73
PDLIM2-203ENST00000339162 ZSCAN29Q8IWY8 852 aaPredicted RBP25.83■■□□□ 1.73
PDLIM2-203ENST00000339162 GPKOWQ92917 476 aaPredicted RBP eCLIP25.83■■□□□ 1.73
PDLIM2-203ENST00000339162 PRMT6Q96LA8 375 aaPredicted RBP25.83■■□□□ 1.73
PDLIM2-203ENST00000339162 COL4A5P29400 1685 aa25.83■■□□□ 1.73
PDLIM2-203ENST00000339162 A0A1W2PQ27 194 aa25.83■■□□□ 1.72
PDLIM2-203ENST00000339162 A0A1W2PQ64 194 aa25.83■■□□□ 1.72
PDLIM2-203ENST00000339162 A0A1W2PQD8 194 aa25.83■■□□□ 1.72
PDLIM2-203ENST00000339162 NPY5RQ15761 445 aa25.83■■□□□ 1.72
PDLIM2-203ENST00000339162 KLHL34Q8N239 644 aa25.83■■□□□ 1.72
PDLIM2-203ENST00000339162 CLIC6Q96NY7 704 aa25.83■■□□□ 1.72
PDLIM2-203ENST00000339162 ZBTB12Q9Y330 459 aaPredicted RBP25.83■■□□□ 1.72
PDLIM2-203ENST00000339162 PCDHB6Q9Y5E3 794 aa25.83■■□□□ 1.72
PDLIM2-203ENST00000339162 PALM3A6NDB9 673 aaPredicted RBP25.82■■□□□ 1.72
PDLIM2-203ENST00000339162 PSMD14O00487 310 aa25.82■■□□□ 1.72
PDLIM2-203ENST00000339162 ADAMTS3O15072 1205 aa25.82■■□□□ 1.72
PDLIM2-203ENST00000339162 TOP1P11387 765 aaKnown RBP25.82■■□□□ 1.72
PDLIM2-203ENST00000339162 R3HDM1Q15032 1099 aaKnown RBP25.82■■□□□ 1.72
PDLIM2-203ENST00000339162 CCDC125Q86Z20 511 aa25.82■■□□□ 1.72
PDLIM2-203ENST00000339162 ANP32BQ92688 251 aaKnown RBP25.82■■□□□ 1.72
PDLIM2-203ENST00000339162 MTMR4Q9NYA4 1195 aa25.82■■□□□ 1.72
PDLIM2-203ENST00000339162 PIM2Q9P1W9 311 aa25.82■■□□□ 1.72
PDLIM2-203ENST00000339162 CCDC192P0DO97 292 aa25.82■■□□□ 1.72
PDLIM2-203ENST00000339162 SH3BP5LQ7L8J4 393 aa25.82■■□□□ 1.72
PDLIM2-203ENST00000339162 FMR1NBQ8N0W7 255 aaPredicted RBP25.82■■□□□ 1.72
PDLIM2-203ENST00000339162 LRRC47Q8N1G4 583 aaKnown RBP25.82■■□□□ 1.72
PDLIM2-203ENST00000339162 KLRF2D3W0D1 207 aa25.81■■□□□ 1.72
PDLIM2-203ENST00000339162 MPHOSPH10O00566 681 aaKnown RBP25.81■■□□□ 1.72
PDLIM2-203ENST00000339162 KINO60870 393 aaKnown RBP25.81■■□□□ 1.72
PDLIM2-203ENST00000339162 RILPL1Q5EBL4 403 aa25.81■■□□□ 1.72
PDLIM2-203ENST00000339162 DNAJC18Q9H819 358 aa25.81■■□□□ 1.72
PDLIM2-203ENST00000339162 SWAP70Q9UH65 585 aa25.81■■□□□ 1.72
PDLIM2-203ENST00000339162 POLD1P28340 1107 aa25.8■■□□□ 1.72
PDLIM2-203ENST00000339162 NLRP5P59047 1200 aa25.8■■□□□ 1.72
PDLIM2-203ENST00000339162 TYRO3Q06418 890 aa25.8■■□□□ 1.72
PDLIM2-203ENST00000339162 GRIPAP1Q4V328 841 aa25.8■■□□□ 1.72
PDLIM2-203ENST00000339162 RBM43Q6ZSC3 357 aaKnown RBP25.8■■□□□ 1.72
PDLIM2-203ENST00000339162 ERCC4Q92889 916 aaPredicted RBP25.8■■□□□ 1.72
PDLIM2-203ENST00000339162 IDI2Q9BXS1 227 aa25.8■■□□□ 1.72
PDLIM2-203ENST00000339162 USP17L5A8MUK1 530 aa25.8■■□□□ 1.72
PDLIM2-203ENST00000339162 GNAQP50148 359 aa25.8■■□□□ 1.72
PDLIM2-203ENST00000339162 PPP6R2O75170 966 aa25.79■■□□□ 1.72
PDLIM2-203ENST00000339162 PARP1P09874 1014 aaKnown RBP25.79■■□□□ 1.72
PDLIM2-203ENST00000339162 SHROOM1Q2M3G4 852 aaPredicted RBP25.79■■□□□ 1.72
PDLIM2-203ENST00000339162 RSBN1LQ6PCB5 846 aaPredicted RBP25.79■■□□□ 1.72
PDLIM2-203ENST00000339162 MTFR1LQ9H019 292 aa25.79■■□□□ 1.72
PDLIM2-203ENST00000339162 CLIP2Q9UDT6 1046 aa25.79■■□□□ 1.72
PDLIM2-203ENST00000339162 NOVP48745 357 aa25.79■■□□□ 1.72
PDLIM2-203ENST00000339162 MRVI1Q9Y6F6 885 aa25.79■■□□□ 1.72
PDLIM2-203ENST00000339162 TGFB2P61812 414 aa25.78■■□□□ 1.72
PDLIM2-203ENST00000339162 TYW1BQ6NUM6 668 aa25.78■■□□□ 1.72
PDLIM2-203ENST00000339162 SHC4Q6S5L8 630 aa25.78■■□□□ 1.72
PDLIM2-203ENST00000339162 BRMS1Q9HCU9 246 aa25.78■■□□□ 1.72
PDLIM2-203ENST00000339162 PLIN4Q96Q06 1357 aa25.78■■□□□ 1.72
PDLIM2-203ENST00000339162 IGKV6D-41A0A0C4DH26 115 aa25.78■■□□□ 1.72
PDLIM2-203ENST00000339162 PFKFB1P16118 471 aa25.78■■□□□ 1.72
PDLIM2-203ENST00000339162 CMA1P23946 247 aa25.78■■□□□ 1.72
PDLIM2-203ENST00000339162 ATP2B2Q01814 1243 aa25.78■■□□□ 1.72
PDLIM2-203ENST00000339162 JMYQ8N9B5 988 aa25.78■■□□□ 1.72
PDLIM2-203ENST00000339162 VAT1LQ9HCJ6 419 aa25.78■■□□□ 1.72
PDLIM2-203ENST00000339162 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.78■■□□□ 1.72
PDLIM2-203ENST00000339162 FRMPD2Q68DX3 1309 aaPredicted RBP25.77■■□□□ 1.72
PDLIM2-203ENST00000339162 WNT7AO00755 349 aa25.77■■□□□ 1.72
PDLIM2-203ENST00000339162 SPECC1Q5M775 1068 aa25.77■■□□□ 1.72
PDLIM2-203ENST00000339162 TNFRSF25Q93038 417 aa25.77■■□□□ 1.72
PDLIM2-203ENST00000339162 UBA5Q9GZZ9 404 aa25.77■■□□□ 1.72
PDLIM2-203ENST00000339162 DHX36Q9H2U1 1008 aaKnown RBP25.77■■□□□ 1.72
PDLIM2-203ENST00000339162 VIL1P09327 827 aaKnown RBP25.76■■□□□ 1.71
PDLIM2-203ENST00000339162 GRIN1Q05586 938 aa25.76■■□□□ 1.71
PDLIM2-203ENST00000339162 DALRD3Q5D0E6 543 aaKnown RBP25.76■■□□□ 1.71
PDLIM2-203ENST00000339162 HEATR3Q7Z4Q2 680 aa25.76■■□□□ 1.71
PDLIM2-203ENST00000339162 HOMER1Q86YM7 354 aa25.76■■□□□ 1.71
PDLIM2-203ENST00000339162 EHD4Q9H223 541 aa25.76■■□□□ 1.71
PDLIM2-203ENST00000339162 PI4KBQ9UBF8 816 aa25.76■■□□□ 1.71
PDLIM2-203ENST00000339162 MYH8P13535 1937 aa25.76■■□□□ 1.71
PDLIM2-203ENST00000339162 A0A087WWV3 80 aa25.76■■□□□ 1.71
PDLIM2-203ENST00000339162 CLRN2A0PK11 232 aa25.76■■□□□ 1.71
PDLIM2-203ENST00000339162 CCDC173Q0VFZ6 552 aa25.76■■□□□ 1.71
PDLIM2-203ENST00000339162 WWC2Q6AWC2 1192 aa25.76■■□□□ 1.71
PDLIM2-203ENST00000339162 SASS6Q6UVJ0 657 aa25.76■■□□□ 1.71
PDLIM2-203ENST00000339162 KIF13BQ9NQT8 1826 aa25.76■■□□□ 1.71
PDLIM2-203ENST00000339162 PDHBP11177 359 aa25.75■■□□□ 1.71
PDLIM2-203ENST00000339162 SDF4Q9BRK5 362 aa25.75■■□□□ 1.71
PDLIM2-203ENST00000339162 ZNF202O95125 648 aa25.75■■□□□ 1.71
PDLIM2-203ENST00000339162 TTLL1O95922 423 aa25.75■■□□□ 1.71
PDLIM2-203ENST00000339162 ANO6Q4KMQ2 910 aa25.75■■□□□ 1.71
PDLIM2-203ENST00000339162 PIK3AP1Q6ZUJ8 805 aa25.75■■□□□ 1.71
PDLIM2-203ENST00000339162 NIM1KQ8IY84 436 aa25.75■■□□□ 1.71
PDLIM2-203ENST00000339162 KRI1Q8N9T8 703 aaKnown RBP25.74■■□□□ 1.71
PDLIM2-203ENST00000339162 PPP1R9BQ96SB3 815 aa25.74■■□□□ 1.71
PDLIM2-203ENST00000339162 GMLQ99445 158 aa25.74■■□□□ 1.71
PDLIM2-203ENST00000339162 ZNRF3Q9ULT6 936 aa25.74■■□□□ 1.71
PDLIM2-203ENST00000339162 TCP10L2B9ZVM9 353 aa25.73■■□□□ 1.71
PDLIM2-203ENST00000339162 RASGRP4Q8TDF6 673 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms